Pre_GI Gene

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Host: NC_006511 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006511:2090058 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
209005820918241767succinate dehydrogenase catalytic subunitQuickGO ontologyBLASTP
20918242092171348succinate dehydrogenase cytochrome b556 small membrane subunitQuickGO ontologyBLASTP
20921652092554390succinate dehydrogenase cytochrome b556 large membrane subunitQuickGO ontologyBLASTP
20929632093208246hypothetical proteinBLASTP
209330920945921284citrate synthaseQuickGO ontologyBLASTP
209472920957751047hypothetical proteinBLASTP
20958302096621792endonuclease VIII DNA N-glycosylase with an AP lyase activityQuickGO ontologyBLASTP
20966702096807138hypothetical proteinBLASTP
209687520988241950putative glycosyl transferaseQuickGO ontologyBLASTP
20988282099661834hypothetical proteinBLASTP
209985421016321779putative glycosyltransferase cell wall biogenesisQuickGO ontologyBLASTP
21017262102436711putative polysaccharide export ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
210333921044721134galactosyltransferaseQuickGO ontologyBLASTP
210537721065551179UDP-galactopyranose mutaseQuickGO ontologyBLASTP
21068142107554741hypothetical proteinBLASTP
21083502108916567probable DNA recombinaseQuickGO ontologyBLASTP
21089762109107132hypothetical proteinBLASTP
21094302110164735hypothetical proteinBLASTP
21101542111086933hypothetical proteinBLASTP
21110802111736657hypothetical proteinBLASTP
21117522112495744hypothetical proteinBLASTP
211282421143051482PTR2-family transport proteinQuickGO ontologyBLASTP
211434421157651422deoxyribodipyrimidine photolyaseQuickGO ontologyBLASTP
21158762116082207hypothetical proteinBLASTP
21163112116508198hypothetical proteinBLASTP
211650821181871680potassium-transporting ATPase subunit AQuickGO ontologyBLASTP