Pre_GI Gene

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Host: NC_009879 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009879:141000 Rickettsia canadensis str. McKiel, complete genome

Host Lineage: Rickettsia canadensis; Rickettsia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This organism was originally isolated from ticks in a field study on tick-transmitted diseases of small mammals in Canada. Member of the typhus group of Rickettsiales. Members of this genus, like other Rickettsial organisms such as Neorickettsia and Anaplasma, are obligate intracellular pathogens. In both groups, the bacteria are transmitted via an insect, usually a tick, to a host organism where they target endothelial cells and sometimes macrophages. They attach via an adhesin, rickettsial outer membrane protein A, and are internalized where they persist as cytoplasmically free organisms. Rickettsia canadensis was originally thought to be a member of the typhus group of Rickettsiales, however, it is now thought to represent a distict group with the rickettsia.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1410141421021089hypothetical proteinBLASTP
1420991432051107Mrp proteinQuickGO ontologyBLASTP
1433061443461041protease activity modulator HflKQuickGO ontologyBLASTP
144517145377861hflc protein hflcQuickGO ontologyBLASTP
1453981469331536Holliday junction resolvaseQuickGO ontologyBLASTP
147028147777750hypothetical proteinBLASTP
147799148173375Succinate dehydrogenase cytochrome b-556 subunitQuickGO ontologyBLASTP
148506148625120hypothetical proteinBLASTP
149004149381378hypothetical proteinBLASTP
1495791513691791succinate dehydrogenaseQuickGO ontologyBLASTP
15141115150999hypothetical protein
151578152234657succinate dehydrogenase flavoprotein subunitQuickGO ontologyBLASTP
15239215278139030S ribosomal protein S12QuickGO ontologyBLASTP
15280915329148330S ribosomal protein S7QuickGO ontologyBLASTP
1533041553762073elongation factor GQuickGO ontologyBLASTP
15553715561276tRNA-TrpQuickGO ontology
155746156009264preprotein translocase subunit SecEQuickGO ontologyBLASTP
156025156603579transcription antitermination protein NusGQuickGO ontologyBLASTP
15683515727243850S ribosomal protein L11QuickGO ontologyBLASTP
15727815799772050S ribosomal protein L1QuickGO ontologyBLASTP
15828215879151050S ribosomal protein L10QuickGO ontologyBLASTP
15882315920037850S ribosomal protein L7L12QuickGO ontologyBLASTP
1599031640244122DNA-directed RNA polymerase subunit betaQuickGO ontologyBLASTP
1642171683534137DNA-directed RNA polymerase beta subunitQuickGO ontologyBLASTP