Pre_GI Gene

Some Help

Host: NC_017048 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017048:484000 Rickettsia prowazekii str. GvV257 chromosome, complete genome

Host Lineage: Rickettsia prowazekii; Rickettsia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This species is the causal agent of typhus. The bacteria are transmitted via an insect, usually a tick, to a host organism, in this case humans, where they target endothelial cells and sometimes macrophages. They attach via an adhesin, rickettsial outer membrane protein A, and are internalized where they persist as cytoplasmically free organisms. Transovarial transmission (from mother to offspring) occurs in the invertebrate host.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
4848494859131065putative nucleoside-diphosphate-sugar epimeraseQuickGO ontologyBLASTP
485913486869957hypothetical proteinBLASTP
4869684880021035HFLK protein hflKQuickGO ontologyBLASTP
488146489006861HFLC protein hflCQuickGO ontologyBLASTP
4890374905781542periplasmic serine protease DO-likeQuickGO ontologyBLASTP
490683491426744hypothetical proteinBLASTP
491564491938375succinate dehydrogenase cytochrome b-556 subunitQuickGO ontologyBLASTP
492097492474378succinate dehydrogenase hydrophobic membrane anchor proteinQuickGO ontologyBLASTP
4926084943981791succinate dehydrogenase flavoprotein subunitQuickGO ontologyBLASTP
494518495174657glutamine transport system permease GLNP glnPQuickGO ontologyBLASTP
49533649572539030S ribosomal protein S12QuickGO ontologyBLASTP
49575949624148330S ribosomal protein S7QuickGO ontologyBLASTP
4962534983522100elongation factor GQuickGO ontologyBLASTP
49849649857176tRNA-TrpQuickGO ontology
498715498915201preprotein translocase subunit SecEQuickGO ontologyBLASTP
498931499509579transcription antitermination protein NusGQuickGO ontologyBLASTP
49964250007943850S ribosomal protein L11QuickGO ontologyBLASTP
50008250079871750S ribosomal protein L1QuickGO ontologyBLASTP
50088650139551050S ribosomal protein L10QuickGO ontologyBLASTP
50158450196137850S ribosomal protein L7L12QuickGO ontologyBLASTP
5028155069394125DNA-directed RNA polymerase subunit betaQuickGO ontologyBLASTP
5070965112144119DNA-directed RNA polymerase subunit betaQuickGO ontologyBLASTP