Pre_GI Gene

Some Help

Host: NC_011094 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011094:842038 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
8420388435191482inner membrane transporter YbgHQuickGO ontologyBLASTP
843848844591744hydrolase-oxidaseQuickGO ontologyBLASTP
844607845263657hypothetical proteinBLASTP
845257846189933allophanate hydrolase subunit 2QuickGO ontologyBLASTP
846179846913735LamBYcsF family proteinQuickGO ontologyBLASTP
847237847368132hypothetical proteinBLASTP
847428847994567HbiFQuickGO ontologyBLASTP
848833849531699hypothetical proteinBLASTP
849525849650126hypothetical protein
8498178509681152UDP-galactopyranose mutaseQuickGO ontologyBLASTP
850968851861894glycosyl transferase family proteinQuickGO ontologyBLASTP
8518748530071134galactosyltransferaseQuickGO ontologyBLASTP
853136853906771O-antigen export system permeaseQuickGO ontologyBLASTP
853910854620711ABC transporter domain-containing proteinQuickGO ontologyBLASTP
8547148564921779glycosyltransferase cell wall biogenesisQuickGO ontologyBLASTP
856742857467726hypothetical proteinBLASTP
8574718594201950glycosyl transferase family proteinQuickGO ontologyBLASTP
859488859625138hypothetical proteinBLASTP
859674860465792endonuclease VIIIQuickGO ontologyBLASTP
8605208615661047protein AbrBQuickGO ontologyBLASTP
8617038629861284type II citrate synthaseQuickGO ontologyBLASTP
863726864130405succinate dehydrogenase cytochrome b556 large membrane subunitQuickGO ontologyBLASTP
864124864471348succinate dehydrogenase cytochrome b556 small membrane subunitQuickGO ontologyBLASTP
8644718662371767succinate dehydrogenase flavoprotein subunitQuickGO ontologyBLASTP
866251866970720succinate dehydrogenase iron-sulfur subunitQuickGO ontologyBLASTP
86749487029528022-oxoglutarate dehydrogenase E1QuickGO ontologyBLASTP