Pre_GI: BLASTP Hits

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Query: NC_009664:533021:539118 Kineococcus radiotolerans SRS30216, complete genome

Start: 539118, End: 539867, Length: 750

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018607:2375344:2388581238858123896271047Brachyspira pilosicoli B2904 chromosome, complete genomeflagellar motor switch protein FliN3e-21102
NC_019908:1467000:1480929148092914819751047Brachyspira pilosicoli P43/6/78 chromosome, complete genomeflagellar motor switch protein FliN3e-21102
NC_014330:1784515:1788618178861817896641047Brachyspira pilosicoli 95/1000 chromosome, complete genomeflagellar motor switch protein FliN3e-21102
NC_018604:492068:4964124964124974581047Brachyspira pilosicoli WesB complete genomeflagellar motor switch protein FliN3e-21102
NC_014150:2201251:2215333221533322164121080Brachyspira murdochii DSM 12563 chromosome, complete genomeflagellar motor switch protein FliN9e-21100
NC_012225:1575432:1600390160039016014721083Brachyspira hyodysenteriae WA1, complete genomeflagellar motor switch protein9e-21100
NC_017243:491681:5083175083175093991083Brachyspira intermedia PWS/A chromosome, complete genomeflagellar motor switch protein8e-21100
NC_016844:775334:7893597893597904051047Treponema pallidum subsp. pallidum DAL-1 chromosome, completebifunctional chemotaxis protein CheC/flagellar motor switch protein FliY9e-2097.4
NC_000919:773784:7874217874217884671047Treponema pallidum subsp. pallidum str. Nichols, complete genomeflagellar motor switch protein (fliY)8e-2097.4
NC_010741:775000:7888697888697899151047Treponema pallidum subsp. pallidum SS14, complete genomeflagellar motor switch protein8e-2097.4
NC_016842:775368:7890057890057900511047Treponema pallidum subsp. pertenue str. SamoaD chromosome, completebifunctional chemotaxis protein CheC/flagellar motor switch protein FliY8e-2097.4
NC_016843:775371:7891927891927902381047Treponema pallidum subsp. pertenue str. Gauthier chromosome,bifunctional chemotaxis protein CheC/flagellar motor switch protein FliY8e-2097.4
NC_016848:775822:7894597894597905051047Treponema pallidum subsp. pertenue str. CDC2 chromosome, completebifunctional chemotaxis protein CheC/flagellar motor switch protein FliY8e-2097.4
NC_017268:775000:7886717886717897171047Treponema pallidum subsp. pallidum str. Chicago chromosome,flagellar motor switch protein8e-2097.4
NC_021508:775264:7889017889017899471047Treponema pallidum subsp. pallidum SS14, complete genomebifunctional chemotaxis protein CheC/flagellar motor switch protein FliY8e-2097.4
NC_015714:768500:7823037823037833491047Treponema paraluiscuniculi Cuniculi A chromosome, complete genomebifunctional chemotaxis protein CheC/flagellar motor switch protein FliY8e-2097.4
NC_014837:2586870:261088226108822611292411Pantoea sp. At-9b chromosome, complete genomeflagellar motor switch protein FliN3e-1995.5
NC_014562:1844268:187369818736981874105408Pantoea vagans C9-1 chromosome, complete genomeFlagellar motor switch protein fliN5e-1994.7
NC_014652:628435:6479166479166490461131Caldicellulosiruptor hydrothermalis 108 chromosome, completechec, inhibitor of mcp methylation / flin fusion protein1e-1893.6
NC_009012:574145:5920165920165932361221Clostridium thermocellum ATCC 27405, complete genomeCheC, inhibitor of MCP methylation1e-1893.6
NC_015921:272517:288141288141288482342Borrelia bissettii DN127 chromosome, complete genomeflagellar motor switch protein FliN2e-1893.2
NC_006156:271410:288358288358288699342Borrelia garinii PBi chromosome linear, complete sequenceflagellar motor switch protein2e-1893.2
NC_008277:272741:288467288467288808342Borrelia afzelii PKo, complete genomeflagellar motor switch protein2e-1893.2
NC_017238:272980:288706288706289047342Borrelia afzelii PKo chromosome, complete genomeflagellar motor switch protein FliN2e-1893.2
NC_008710:277207:291605291605291949345Borrelia turicatae 91E135, complete genomeflagellar motor switch protein FliN1e-1893.2
NC_009633:2725128:2725128272512827263091182Alkaliphilus metalliredigens QYMF chromosome, complete genomeflagellar motor switch protein1e-1893.2
NC_016751:1979201:1993227199322719946031377Marinitoga piezophila KA3 chromosome, complete genomeflagellar motor switch protein FliN2e-1892.8
NC_010673:291679:292313292313292657345Borrelia hermsii DAH, complete genomeflagellar motor switch protein FliN3e-1892.4
NC_012880:1765920:183055418305541830964411Dickeya dadantii Ech703, complete genomeflagellar motor switch protein FliN4e-1892
NC_001318:270488:289576289576289917342Borrelia burgdorferi B31, complete genomeflagellar motor switch protein (fliN)4e-1892
NC_011728:269853:288944288944289285342Borrelia burgdorferi ZS7, complete genomeflagellar switch protein FliY4e-1892
NC_007912:2768363:276796327679632768370408Saccharophagus degradans 2-40, complete genomesurface presentation of antigens (SpoA) protein4e-1891.7
NC_014500:3023762:306009530600953060511417Dickeya dadantii 3937 chromosome, complete genomeflagellar motor switch protein fliN4e-1891.7
NC_014150:2201251:221656222165622216894333Brachyspira murdochii DSM 12563 chromosome, complete genome5e-1891.7
NC_019978:625476:6441576441576452901134Halobacteroides halobius DSM 5150, complete genomeflagellar motor switch protein FliN5e-1891.3
NC_009654:3849774:387831938783193878780462Marinomonas sp. MWYL1, complete genomeflagellar motor switch protein FliN3e-1789
NC_009512:1691930:169493816949381695402465Pseudomonas putida F1, complete genomeflagellar motor switch protein FliN5e-1788.2
NC_002947:4931476:494885949488594949344486Pseudomonas putida KT2440, complete genomeflagellar motor switch protein5e-1788.2
NC_017986:4374979:437796943779694378451483Pseudomonas putida ND6 chromosome, complete genomeFliN5e-1788.2
NC_010501:4080937:409817840981784098642465Pseudomonas putida W619, complete genomeflagellar motor switch protein FliN6e-1787.8
NC_016893:43234:584315843158850420Wigglesworthia glossinidia endosymbiont of Glossina morsitansflagellar motor switching and energizing component1e-1687
NC_013851:3300278:331189933118993312345447Allochromatium vinosum DSM 180 chromosome, complete genomeflagellar motor switch protein FliN1e-1687
NC_009617:4946000:4955939495593949571351197Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeflagellar motor switch protein1e-1687
NC_020291:4944835:4993760499376049949621203Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeflagellar motor switch phosphatase FliY1e-1687
NC_010723:801215:8012158012158023661152Clostridium botulinum E3 str. Alaska E43, complete genomeflagellar motor switch protein FliN1e-1687
NC_007519:3527207:354353235435323544059528Desulfovibrio alaskensis G20 chromosome, complete genomesurface presentation of antigens (SPOA) protein1e-1686.7
NC_004129:1848701:185182918518291852290462Pseudomonas fluorescens Pf-5, complete genomeflagellar motor switch protein2e-1686.3
NC_016894:2931213:2937868293786829390011134Acetobacterium woodii DSM 1030 chromosome, complete genomeflagellar motor switch protein FliN2e-1686.3
NC_007492:1735595:173559517355951736053459Pseudomonas fluorescens PfO-1, complete genomeflagellar motor switch protein2e-1686.3
NC_014366:1814000:183272818327281833141414Gamma proteobacterium HdN1, complete genomeFlagellar motor switch FliN2e-1685.9
NC_019940:293476:298826298826299197372Thioflavicoccus mobilis 8321 chromosome, complete genomeflagellar motor switch protein FliN2e-1685.9
NC_012225:1575432:159993915999391600193255Brachyspira hyodysenteriae WA1, complete genomeflagellar motor switch protein4e-1685.1
NC_020911:2921925:294418129441812944477297Octadecabacter antarcticus 307, complete genomeflagellar motor switch protein FliN4e-1685.1
NC_009698:2727203:2743920274392027450801161Clostridium botulinum A str. Hall chromosome, complete genomeflagellar motor switch protein1e-1583.6
NC_009697:2790277:2806994280699428081541161Clostridium botulinum A str. ATCC 19397 chromosome, completeflagellar motor switch protein1e-1583.6
NC_009495:2876865:2893582289358228947421161Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeflagellar motor switch protein1e-1583.6
NC_012563:3090954:3107671310767131088311161Clostridium botulinum A2 str. Kyoto, complete genomeflagellar motor switch protein FliN1e-1583.6
NC_010520:2937981:2953084295308429542441161Clostridium botulinum A3 str. Loch Maree, complete genomeflagellar motor switch protein FliN1e-1583.6
NC_021182:2921000:2936970293697029381181149Clostridium pasteurianum BC1, complete genomeflagellar motor switch protein FliN1e-1583.6
NC_009699:2901497:2917261291726129184211161Clostridium botulinum F str. Langeland chromosome, complete genomeflagellar motor switch protein1e-1583.6
NC_012658:2930244:2945156294515629463161161Clostridium botulinum Ba4 str. 657 chromosome, complete genomeflagellar motor switch protein1e-1583.6
NC_017297:2905138:2917398291739829185581161Clostridium botulinum F str. 230613 chromosome, complete genomeflagellar motor switch protein FliN1e-1583.6
NC_010516:2900057:2912728291272829138881161Clostridium botulinum B1 str. Okra, complete genomeflagellar motor switch protein FliN1e-1583.6
NC_004344:26828:572215722157628408Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein1e-1583.6
NC_007759:1356439:135643913564391356930492Syntrophus aciditrophicus SB, complete genomeflagellar motor switch protein1e-1583.2
NC_004557:1826977:1838003183800318392531251Clostridium tetani E88, complete genomeflagellar motor switch protein3e-1582.4
NC_014328:1046958:1058621105862110598261206Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative flagellar motor switch protein2e-1582.4
NC_017295:2286911:2305431230543123066181188Clostridium acetobutylicum EA 2018 chromosome, complete genomeflagellar motor switch protein4e-1582
NC_018664:1663324:1671062167106216722071146Clostridium acidurici 9a chromosome, complete genomeflagellar motor switch phosphatase FliY4e-1582
NC_015425:1207314:1211758121175812130111254Clostridium botulinum BKT015925 chromosome, complete genomeflagellar motor switch protein FliN5e-1581.6
NC_015391:2099472:2099472209947221005511080Carnobacterium sp. 17-4 chromosome, complete genomeflagellar motor switching and energizing phosphatase2e-1479.3
NC_021184:2238500:2244250224425022456381389Desulfotomaculum gibsoniae DSM 7213, complete genomeflagellar motor switch protein FliN3e-1479
NC_012440:659646:686871686871687443573Persephonella marina EX-H1, complete genomeflagellar motor switch protein FliN6e-1478.2
NC_008593:1060548:1080379108037910815691191Clostridium novyi NT, complete genomeflagellar switch protein FliY, contains CheC-like domain1e-1377
NC_015913:624859:6266526266526277281077Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomeflagellar motor switch phosphatase FliY4e-1375.5
NC_016012:561687:5662645662645673401077Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeflagellar motor switch protein5e-1375.1
NC_013223:685628:705832705832706161330Desulfohalobium retbaense DSM 5692, complete genomeflagellar motor switch protein FliN5e-1374.7
NC_012438:1211940:124043012404301241008579Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeflagellar motor switch protein FliN5e-1374.7
NC_008576:4467745:447890444789044479317414Magnetococcus sp. MC-1, complete genomeflagellar motor switch protein FliN2e-1169.7
NC_015186:1698000:170739517073951707715321Acidiphilium multivorum AIU301, complete genomeflagellar motor switch protein FliN2e-1169.3
NC_014758:1387470:138896413889641389248285Calditerrivibrio nitroreducens DSM 19672 chromosome, completesurface presentation of antigens (spoa) protein2e-1169.3
NC_009484:1627734:163713316371331637531399Acidiphilium cryptum JF-5 chromosome, complete genomeflagellar motor switch protein FliN2e-1169.3
NC_021184:2238500:225945022594502259845396Desulfotomaculum gibsoniae DSM 7213, complete genomeflagellar motor switch/type III secretory pathway protein6e-1167.8
NC_006677:435652:446810446810447127318Gluconobacter oxydans 621H, complete genomeflagellar motor switch protein8e-1167.4
NC_008599:1489868:149197814919781492808831Campylobacter fetus subsp. fetus 82-40, complete genomeflagellar motor switch protein2e-0962.8
NC_007645:4195500:422258742225874222922336Hahella chejuensis KCTC 2396, complete genomeflagellar motor switch protein1e-0860.1
NC_017192:2469667:247767524776752477962288Arcobacter sp. L, complete genomeflagellar motor switch protein FliN6e-0857.8
NC_017187:1832045:184266018426601842947288Arcobacter butzleri ED-1, complete genomeflagellar motor switch protein FliN7e-0857.8
NC_009850:1954969:196445219644521964739288Arcobacter butzleri RM4018, complete genomeflagellar motor switch protein FliN7e-0857.8
NC_008435:1215437:130955713095571309955399Rhodopseudomonas palustris BisA53, complete genomeflagellar motor switch protein FliN1e-0757.4
NC_009253:2615777:261907526190752619461387Desulfotomaculum reducens MI-1 chromosome, complete genomesurface presentation of antigens (SPOA) protein4e-0755.5
NC_009850:1954969:195604519560451956914870Arcobacter butzleri RM4018, complete genomeflagellar motor switch protein FliY7e-0754.7
NC_017192:2469667:246966724696672470548882Arcobacter sp. L, complete genomeflagellar motor switch protein FliY7e-0754.7
NC_017187:1832045:183426918342691835135867Arcobacter butzleri ED-1, complete genomeflagellar motor switch protein FliY6e-0754.7
NC_011772:1575674:159544815954481595807360Bacillus cereus G9842, complete genomeputative flagellar motor switch protein FliN2e-0652.8
NC_011894:6382636:638822663882266388531306Methylobacterium nodulans ORS 2060, complete genomesurface presentation of antigens (SPOA) protein3e-0652.8
NC_012440:659646:666224666224666463240Persephonella marina EX-H1, complete genomeflagellar motor switch phosphatase FliY6e-0651.2