Pre_GI Gene

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Host: NC_010673 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010673:291679 Borrelia hermsii DAH, complete genome

Host Lineage: Borrelia hermsii; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated from a case of relapsing fever in western Washington, USA. Borrelia hermsii is the causative agent of tick-borne relapsing fever in the western United States and Canada. Borrelia then multiplies rapidly, causing a generalized infection throughout the tick. While feeding, the tick passes the organism into a mammalian host through its infectious saliva. Relapsing fever is characterized by a period of chills, fever, headache, and malaise, an asymptomatic period, followed by another episode of symptoms. This cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another. These plasmids carry genes involved in antigenic variation and pathogenicity.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
291679292320642flagellar biosynthetic protein FliZQuickGO ontologyBLASTP
292313292657345flagellar motor switch protein FliNQuickGO ontologyBLASTP
2927082937661059flagellar motor switch protein FliMQuickGO ontologyBLASTP
293786294319534flagellar protein FliLQuickGO ontologyBLASTP
294362295150789chemotaxis MotB proteinQuickGO ontologyBLASTP
295147295932786chemotaxis MotA proteinQuickGO ontologyBLASTP
295929296150222motility proteinQuickGO ontologyBLASTP
2961672974951329flagellar hook protein FlgEQuickGO ontologyBLASTP
297500297934435basal-body rod modification protein FlgDQuickGO ontologyBLASTP
2979472991161170flagellar hook-length control proteinQuickGO ontologyBLASTP
299120299734615FlbB proteinQuickGO ontologyBLASTP
299727300158432flagellar proteinQuickGO ontologyBLASTP
3001553014651311flagellum-specific ATP synthaseQuickGO ontologyBLASTP
301479302405927flagellar assembly protein FliHQuickGO ontologyBLASTP
3024143034481035flagellar motor switch protein FliGQuickGO ontologyBLASTP
3034643051701707flagellar M-ring protein FliFQuickGO ontologyBLASTP
305184305513330flagellar hook-basal body complex protein FliEQuickGO ontologyBLASTP
305529305987459flagellar basal-body rod protein FlgCQuickGO ontologyBLASTP
306013306420408flagellar basal-body rod protein FlgBQuickGO ontologyBLASTP
3064543078091356ATP-dependent hsl protease ATP-binding subunit HslUQuickGO ontologyBLASTP
307806308348543ATP-dependent protease HslVQuickGO ontologyBLASTP
308358309302945Smf proteinQuickGO ontologyBLASTP
309308309997690hypothetical proteinBLASTP
3099983112391242cell division protein FtsZQuickGO ontologyBLASTP
3112153124561242cell division protein FtsAQuickGO ontologyBLASTP
312456313199744DivIB proteinQuickGO ontologyBLASTP
3132393143421104cell division protein FtsWQuickGO ontologyBLASTP
3143503154051056phospho-N-acetylmuramoyl-pentapeptide- transferaseQuickGO ontologyBLASTP
3154233168171395UDP-N-acetylmuramoylalanyl-D-glutamyl-L- ornithine--D-alanyl-D-alanine ligaseQuickGO ontologyBLASTP