Pre_GI: BLASTP Hits

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Query: NC_008271:140846:161508 Rhodococcus sp. RHA1 plasmid pRHL3, complete sequence

Start: 161508, End: 162521, Length: 1014

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012522:2031786:2033292203329220342991008Rhodococcus opacus B4, complete genomeF420-dependent glucose-6-phosphate dehydrogenase1e-179629
NC_008268:2313583:2314567231456723155741008Rhodococcus sp. RHA1, complete genomeprobable 5,10-methylenetetrahydromethanopterin reductase1e-175615
NC_008271:35909:5945859458604651008Rhodococcus sp. RHA1 plasmid pRHL3, complete sequencepossible F420-dependent glucose-6-phosphate dehydrogenase1e-174612
NC_000962:475816:4907834907834917931011Mycobacterium tuberculosis H37Rv, complete genomePROBABLE F420-DEPENDENT GLUCOSE-6-PHOSPHATE DEHYDROGENASE FGD15e-165580
NC_012207:477500:4919314919314929411011Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative F420-dependent glucose-6-phosphate dehydrogenase5e-165580
NC_008769:507000:5215985215985226081011Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomeputative f420-dependent glucose-6-phosphate dehydrogenase fgd15e-165580
NC_002755:472872:4922324922324932421011Mycobacterium tuberculosis CDC1551, complete genomeglucose-6-phosphate dehydrogenase, F420-dependent5e-165580
NC_009565:479500:4939534939534949631011Mycobacterium tuberculosis F11, complete genomeF420-dependent glucose-6-phosphate dehydrogenase fgd15e-165580
NC_009525:477093:4920934920934931031011Mycobacterium tuberculosis H37Ra, complete genomeputative f420-dependent glucose-6-phosphate dehydrogenase Fgd15e-165580
NC_002945:476835:4918024918024928121011Mycobacterium bovis AF2122/97, complete genomeF420-dependent glucose-6-phosphate dehydrogenase5e-165580
NC_012943:476500:4910424910424920521011Mycobacterium tuberculosis KZN 1435 chromosome, complete genomeF420-dependent glucose-6-phosphate dehydrogenase5e-165580
NC_016768:476500:4910424910424920521011Mycobacterium tuberculosis KZN 4207 chromosome, complete genomeF420-dependent glucose-6-phosphate dehydrogenase fgd15e-165580
NC_016804:477500:4919324919324929421011Mycobacterium bovis BCG str. Mexico chromosome, complete genomeF420-dependent glucose-6-phosphate dehydrogenase5e-165580
NC_019950:481881:4971714971714981811011Mycobacterium canettii CIPT 140060008 complete genomeF420-dependent glucose-6-phosphate dehydrogenase Fgd14e-165580
NC_015848:483500:5011525011525021621011Mycobacterium canettii CIPT 140010059, complete genomeputative F420-dependent glucose-6-phosphate dehydrogenase FGD11e-164578
NC_010612:835648:8529698529698539791011Mycobacterium marinum M, complete genomeF420-dependent glucose-6-phosphate dehydrogenase Fgd13e-163574
NC_016604:1285277:1306137130613713071471011Mycobacterium rhodesiae NBB3 chromosome, complete genomeglucose-6-phosphate dehydrogenase (coenzyme-F420)2e-162572
NC_002677:332923:3530073530073540171011Mycobacterium leprae TN, complete genomeputative F420-dependent glucose-6-phosphate dehydrogenase2e-159561
NC_011896:332939:3530233530233540331011Mycobacterium leprae Br4923, complete genomeputative F420-dependent glucose-6-phosphate dehydrogenase2e-159561
NC_007355:499764:5060865060865071141029Methanosarcina barkeri str. fusaro chromosome 1, complete sequenceF420-dependent glucose-6-phosphate dehydrogenase5e-56218
NC_012522:7837071:784454878445487844892345Rhodococcus opacus B4, complete genomehypothetical protein8e-55214
NC_015574:2322811:233672223367222337678957Methanobacterium sp. SWAN-1 chromosome, complete genomeF420-dependent oxidoreductase, G6PDH family2e-48192
NC_014659:2769486:278434827843482785298951Rhodococcus equi 103S, complete genomeFMN-dependent monooxygenase4e-41168
NC_014625:1903277:191122719112271912180954Ketogulonicigenium vulgare Y25 chromosome, complete genomedehydrogenase protein2e-39163
NC_019792:3219333:322031532203153221280966Natronobacterium gregoryi SP2 chromosome, complete genomenon-F420 flavinoid oxidoreductase5e-38158
NC_014158:233733:288586288586289368783Tsukamurella paurometabola DSM 20162 chromosome, complete genomeF420-dependent oxidoreductase, G6PDH family9e-36150
NC_014815:2363460:238765523876552388620966Micromonospora sp. L5 chromosome, complete genomef420-dependent oxidoreductase, g6pdh family5e-35148
NC_015588:475723:4989794989795000041026Isoptericola variabilis 225 chromosome, complete genomeF420-dependent oxidoreductase, G6PDH family8e-32137
NC_013849:627811:645634645634646632999Ferroglobus placidus DSM 10642 chromosome, complete genome5,10-methylenetetrahydromethanopterin reductase2e-20100
NC_015562:1299648:130121013012101302205996Methanotorris igneus Kol 5 chromosome, complete genome5,10-methylenetetrahydromethanopterin reductase3e-2099.4
NC_014830:3438504:3463866346386634650021137Intrasporangium calvum DSM 43043 chromosome, complete genomeLuciferase-like, subgroup9e-2097.8
NC_003551:478065:4872644872644883131050Methanopyrus kandleri AV19, complete genomemethylenetetrahydromethanopterin reductase2e-1894
NC_014122:143446:148423148423149418996Methanocaldococcus infernus ME chromosome, complete genome5,10-methylenetetrahydromethanopterin reductase1e-1894
NC_013407:146000:162714162714163709996Methanocaldococcus vulcanius M7, complete genome5,10-methylenetetrahydromethanopterin reductase2e-1893.2
NC_014253:2113233:213386221338622134848987Methanohalobium evestigatum Z-7303 chromosome, complete genome5,10-methylenetetrahydromethanopterin reductase9e-1787.8
NC_009921:3419978:343679634367963437671876Frankia sp. EAN1pec, complete genomeluciferase family protein4e-1685.9
NC_013849:19404:4081540815418311017Ferroglobus placidus DSM 10642 chromosome, complete genomeLuciferase-like, subgroup2e-1583.2
NC_008278:925231:939757939757940668912Frankia alni ACN14a, complete genomehypothetical protein4e-1582.4
NC_014165:2888961:2906558290655829081891632Thermobispora bispora DSM 43833 chromosome, complete genomeluciferase-like monooxygenase4e-1479.3
NC_013510:3117837:3148924314892431499521029Thermomonospora curvata DSM 43183, complete genomeLuciferase-like monooxygenase7e-1478.6
NC_015957:5082172:5086986508698650880471062Streptomyces violaceusniger Tu 4113 chromosome, complete genomeputative F420-dependent oxidoreductase6e-1478.6
NC_008595:2252830:225646422564642257324861Mycobacterium avium 104, complete genomehypothetical protein7e-1375.1
NC_013523:2560000:2577966257796625790451080Sphaerobacter thermophilus DSM 20745 chromosome 1, complete genomeLuciferase-like monooxygenase2e-1273.9
NC_013530:423540:4431224431224453832262Xylanimonas cellulosilytica DSM 15894, complete genomeFAD linked oxidase domain protein3e-1272.8
NC_009565:3299937:3314576331457633157211146Mycobacterium tuberculosis F11, complete genomehypothetical oxidoreductase1e-1170.9
NC_009525:3300456:3315095331509533162401146Mycobacterium tuberculosis H37Ra, complete genomeN5,N10-methylenetetrahydromethanopterin reductase-related protein1e-1170.9
NC_008769:3242453:3257264325726432584091146Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomeputative oxidoreductase1e-1170.9
NC_012207:3237440:3250091325009132512361146Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative oxidoreductase1e-1170.9
NC_002945:3246278:3259791325979132609361146Mycobacterium bovis AF2122/97, complete genomeoxidoreductase1e-1170.9
NC_000962:3288464:3303103330310333042481146Mycobacterium tuberculosis H37Rv, complete genomePOSSIBLE OXIDOREDUCTASE1e-1170.9
NC_016804:3221818:3236629323662932377741146Mycobacterium bovis BCG str. Mexico chromosome, complete genomeputative oxidoreductase1e-1170.9
NC_017026:3282405:3297048329704832981931146Mycobacterium tuberculosis RGTB327 chromosome, complete genomeoxidoreductase1e-1170.9
NC_019950:3306419:3324033332403333251781146Mycobacterium canettii CIPT 140060008 complete genomePutative oxidoreductase1e-1170.9
NC_015848:3343731:3359724335972433608691146Mycobacterium canettii CIPT 140010059, complete genomeputative oxidoreductase1e-1170.9
NC_002755:3282785:3297424329742432985691146Mycobacterium tuberculosis CDC1551, complete genomeN5,N10-methylenetetrahydromethanopterin reductase-related protein3e-1169.7
NC_015276:1531159:1531159153115915322441086Marinomonas mediterranea MMB-1 chromosome, complete genomepyrimidine utilization protein A5e-1168.9
NC_012522:7837071:784362278436227844551930Rhodococcus opacus B4, complete genomeputative oxidoreductase7e-1168.6
NC_014507:2196539:219954921995492200547999Methanoplanus petrolearius DSM 11571 chromosome, complete genome5,10-methylenetetrahydromethanopterin reductase6e-1168.6
NC_015574:1970967:198397119839711984936966Methanobacterium sp. SWAN-1 chromosome, complete genome5,10-methylenetetrahydromethanopterin reductase8e-1168.2
NC_013093:7222000:723693572369357237816882Actinosynnema mirum DSM 43827, complete genomeLuciferase-like monooxygenase2e-1067.4
NC_002677:173170:1754411754411765891149Mycobacterium leprae TN, complete genomeputative oxidoreductase2e-1067
NC_011896:173197:1754681754681766161149Mycobacterium leprae Br4923, complete genomeputative oxidoreductase2e-1067
NC_009380:4702815:472372647237264724616891Salinispora tropica CNB-440 chromosome, complete genomehypothetical protein3e-1066.6
NC_013526:955848:977624977624978514891Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeLuciferase-like monooxygenase2e-1066.6
NC_010296:2695186:2709065270906527101141050Microcystis aeruginosa NIES-843, complete genomealkanesulfonate monooxygenase3e-1066.2
NC_013131:5226919:523047052304705231336867Catenulispora acidiphila DSM 44928, complete genomeLuciferase-like monooxygenase4e-1065.9
NC_016109:4485925:449765444976544498541888Kitasatospora setae KM-6054, complete genomehypothetical protein4e-1065.9
NC_013174:650986:664735664735665733999Jonesia denitrificans DSM 20603, complete genomeLuciferase-like monooxygenase9e-1064.7
NC_003155:921494:929152929152930075924Streptomyces avermitilis MA-4680, complete genomemonooxygenase1e-0964.3
NC_015671:3153325:317564031756403176575936Cellvibrio gilvus ATCC 13127 chromosome, complete genomeputative F420-dependent oxidoreductase2e-0963.5
NC_006361:3132000:313741631374163138288873Nocardia farcinica IFM 10152, complete genomehypothetical protein3e-0963.2
NC_013093:125363:128739128739129671933Actinosynnema mirum DSM 43827, complete genomeLuciferase-like monooxygenase3e-0963.2
NC_009953:3426344:342932634293263430213888Salinispora arenicola CNS-205 chromosome, complete genomehypothetical protein4e-0962.8
NC_016582:6509792:652535565253556526248894Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein5e-0962.4
NC_012669:96966:116343116343117266924Beutenbergia cavernae DSM 12333, complete genomeLuciferase-like monooxygenase5e-0962.4
NC_008146:3401743:3405232340523234062541023Mycobacterium sp. MCS, complete genomeluciferase-like protein8e-0961.6
NC_008705:3430839:3433514343351434345361023Mycobacterium sp. KMS, complete genomeluciferase family protein8e-0961.6
NC_009077:3376351:3379026337902633800481023Mycobacterium sp. JLS, complete genomeluciferase family protein8e-0961.6
NC_016947:2380500:2395352239535223963951044Mycobacterium intracellulare MOTT-02 chromosome, complete genomeluciferase family protein9e-0961.2
NC_009515:510121:522158522158523123966Methanobrevibacter smithii ATCC 35061, complete genomemethylenetetrahydromethanopterin reductase1e-0860.8
NC_008578:1827605:184917718491771850124948Acidothermus cellulolyticus 11B, complete genomeluciferase family protein1e-0860.8
NC_012522:7837071:784196178419617842878918Rhodococcus opacus B4, complete genomehypothetical protein2e-0860.5
NC_013093:2633000:265936326593632660220858Actinosynnema mirum DSM 43827, complete genomeLuciferase-like monooxygenase3e-0860.1
NC_020272:2077795:2083485208348520845581074Bacillus amyloliquefaciens IT-45, complete genomeluciferase family protein4e-0859.3
NC_019673:9084045:9098660909866090998021143Saccharothrix espanaensis DSM 44229 complete genomeAlkanesulfonate monooxygenase5e-0858.9
NC_019974:2179000:222854122285412229461921Natronococcus occultus SP4, complete genomeluciferase-type oxidoreductase, BA3436 family5e-0858.9
NC_012589:633500:6482936482936493211029Sulfolobus islandicus L.S.2.15, complete genomeLuciferase-like monooxygenase4e-0858.9
NC_011896:427660:4382714382714393231053Mycobacterium leprae Br4923, complete genomeputative coenzyme F420-dependent oxidoreductase7e-0858.2
NC_002677:427500:4382624382624393141053Mycobacterium leprae TN, complete genomepossible coenzyme F420-dependent oxidoreductase7e-0858.2
NC_008596:2873675:287367528736752874541867Mycobacterium smegmatis str. MC2 155, complete genomehydride transferase 19e-0858.2
NC_018750:6717315:6722665672266567236781014Streptomyces venezuelae ATCC 10712, complete genomeF420-dependent N(5),N(10)-methylenetetrahydromethanopterin reductase9e-0858.2
NC_016948:3023940:303165530316553032569915Mycobacterium intracellulare MOTT-64 chromosome, complete genomehypothetical protein1e-0757.8
NC_008596:4152916:4168736416873641698061071Mycobacterium smegmatis str. MC2 155, complete genomealkanal monooxygenase1e-0757.8
NC_019962:492000:512613512613513536924Natrinema pellirubrum DSM 15624, complete genomeluciferase-type oxidoreductase, BA3436 family2e-0757.4
NC_008595:2546696:257861725786172579612996Mycobacterium avium 104, complete genome5,10-methylenetetrahydromethanopterin reductase1e-0757.4
NC_008800:2127918:2129142212914221302451104Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,alkanesulfonate monooxygenase1e-0757.4
NC_015957:5136500:513912751391275140086960Streptomyces violaceusniger Tu 4113 chromosome, complete genomeluciferase-like protein2e-0757
NC_015567:547500:5767055767055777961092Serratia sp. AS9 chromosome, complete genomealkanesulfonate monooxygenase2e-0757
NC_015566:547387:5765195765195776101092Serratia sp. AS12 chromosome, complete genomealkanesulfonate monooxygenase2e-0757
NC_013131:8480384:852485585248558525784930Catenulispora acidiphila DSM 44928, complete genomeLuciferase-like monooxygenase2e-0756.6
NC_010557:316000:3380693380693391721104Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceLuciferase-like monooxygenase2e-0756.6
NC_013131:2517861:253478725347872535719933Catenulispora acidiphila DSM 44928, complete genomehypothetical protein4e-0755.8
NC_010296:2695186:2710629271062927117261098Microcystis aeruginosa NIES-843, complete genomealkanesulfonate monooxygenase6e-0755.5
NC_016111:5515462:5532511553251155335601050Streptomyces cattleya NRRL 8057, complete genomeFMN-dependent monooxygenase6e-0755.5
NC_014815:841484:856510856510857466957Micromonospora sp. L5 chromosome, complete genomef420-dependent oxidoreductase6e-0755.5
NC_013172:3093467:3110773311077331118281056Brachybacterium faecium DSM 4810, complete genomeflavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase6e-0755.5
NC_008268:442657:4615894615894628121224Rhodococcus sp. RHA1, complete genomemonooxygenase5e-0755.5
NC_013790:756000:758519758519759475957Methanobrevibacter ruminantium M1 chromosome, complete genome5,10-methylenetetrahydromethanopterin reductase Mer5e-0755.5
NC_019962:3331849:333184933318493332721873Natrinema pellirubrum DSM 15624, complete genomeputative F420-dependent oxidoreductase, Rv2161c family6e-0755.1
NC_015312:1371530:1393925139392513950281104Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeluciferase-like protein7e-0755.1
NC_003888:5443832:545801954580195458891873Streptomyces coelicolor A3(2), complete genomeoxidoreductase9e-0754.7
NC_016948:3104403:311090131109013111896996Mycobacterium intracellulare MOTT-64 chromosome, complete genome5,10-methylenetetrahydromethanopterin reductase8e-0754.7
NC_009725:1787262:1816767181676718178401074Bacillus amyloliquefaciens FZB42, complete genomehypothetical protein2e-0653.9
NC_017186:7480714:750030975003097501199891Amycolatopsis mediterranei S699 chromosome, complete genomeflavin-dependent oxidoreductase2e-0653.5
NC_014318:7480669:750026475002647501154891Amycolatopsis mediterranei U32 chromosome, complete genomeputative flavin-dependent oxidoreductase2e-0653.5
NC_014814:1425500:1426123142612314271721050Mycobacterium sp. Spyr1 chromosome, complete genomeflavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase2e-0653.1
NC_011283:2323687:2336190233619023373171128Klebsiella pneumoniae 342 chromosome, complete genomemonooxygenase, luciferase family2e-0653.1
NC_009077:4810379:4812151481215148132001050Mycobacterium sp. JLS, complete genomeluciferase family protein3e-0653.1
NC_008595:1869284:1881648188164818828501203Mycobacterium avium 104, complete genomehypothetical protein3e-0653.1
NC_016582:10227196:1027079110270791102718191029Streptomyces bingchenggensis BCW-1 chromosome, complete genomeluciferase family protein4e-0652.8
NC_015312:681678:6816786816786827451068Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeluciferase-like protein4e-0652.4
NC_009921:565947:570804570804571682879Frankia sp. EAN1pec, complete genomeluciferase family protein4e-0652.4
NC_013510:517878:5352065352065363691164Thermomonospora curvata DSM 43183, complete genomeAlkanesulfonate monooxygenase5e-0652.4
NC_016109:4485925:451577045157704516450681Kitasatospora setae KM-6054, complete genomehypothetical protein6e-0652
NC_016906:1458158:147728314772831478281999Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative F420-dependent oxidoreductase7e-0652
NC_015594:160848:1675491675491686551107Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeAlkanal monooxygenase7e-0651.6
NC_019673:3559185:3562156356215635632291074Saccharothrix espanaensis DSM 44229 complete genomeLuciferase-like monooxygenase7e-0651.6