Pre_GI Gene

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Host: NC_008596 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008596:2873675 Mycobacterium smegmatis str. MC2 155, complete genome

Host Lineage: Mycobacterium smegmatis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Causes opportunistic infections. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium smegmatis was initially isolated from human smegma. It is associated with soft tissue lesions following trauma or surgery. It is also reported as a possible factor in penile carcinogenesis.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
28736752874541867hydride transferase 1QuickGO ontologyBLASTP
28745642875436873C-5 sterol desaturaseQuickGO ontologyBLASTP
287559028767471158sensor kinaseQuickGO ontologyBLASTP
28802082880504297ABC efflux pump fused inner membrane and ATPase subunitsQuickGO ontology
28805732881502930ISMsm1 transposase orfBQuickGO ontologyBLASTP
28814992881834336ISMsm1 transposase orfAQuickGO ontologyBLASTP
288287928840481170hypothetical protein
288586928873351467IS1549 transposaseQuickGO ontologyBLASTP
288894828901711224hypothetical proteinBLASTP
28901622890698537hypothetical proteinBLASTP
289041728917391323IS1096 tnpA proteinQuickGO ontologyBLASTP
28917472892448702IS1096 tnpR proteinQuickGO ontologyBLASTP
289262228939891368ISMsm4 transposaseQuickGO ontologyBLASTP
28941432894352210hypothetical protein
28946482894974327hypothetical protein
2895086289516075tRNA-ValQuickGO ontology