Pre_GI Gene

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Host: NC_009380 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009380:4702815 Salinispora tropica CNB-440 chromosome, complete genome

Host Lineage: Salinispora tropica; Salinispora; Micromonosporaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from coarse beach sand off the Bahamas. An obligate marine actinomycete. Salinispora strains are commonly isolated from tropical marine sediment. Members of this genus produce branched hyphae and require media which contain seawater or sodium. A survey of the cultured species identified over 90 isolates which produce compounds that inhibited cancer cells. These organisms may be a new source of bioactive chemicals for use in disease and cancer treatments. This species produces the chemicals salinosporamide A and B which may be useful for cancer treatment.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
47028154703813999helix-turn-helix type 11 domain-containing proteinQuickGO ontologyBLASTP
47038044704718915short chain dehydrogenaseQuickGO ontologyBLASTP
47048194705493675resolvase domain-containing proteinQuickGO ontologyBLASTP
470594347074781536transposase IS204IS1001IS1096IS1165 family proteinQuickGO ontologyBLASTP
470762747090931467RNA-directed DNA polymeraseQuickGO ontologyBLASTP
47095954710458864transposase IS4 family proteinQuickGO ontologyBLASTP
47116014712491891hypothetical proteinBLASTP
47125834712936354hypothetical protein
471447847171352658phosphoenolpyruvate synthaseQuickGO ontologyBLASTP
471713247188171686AMP-dependent synthetase and ligaseQuickGO ontologyBLASTP
471881447204901677DNA polymerase subunit betaQuickGO ontologyBLASTP
47204904720750261hypothetical proteinBLASTP
472074747218471101hypothetical proteinBLASTP
47218444722824981nucleoside diphosphate kinaseQuickGO ontologyBLASTP
47228214723729909hypothetical proteinBLASTP
47237264724616891hypothetical proteinBLASTP
47246134725572960hypothetical proteinBLASTP