Pre_GI Gene

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Host: NC_008268 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008268:2313583 Rhodococcus sp. RHA1, complete genome

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
23135832314497915hypothetical proteinBLASTP
231456723155741008probable 510-methylenetetrahydromethanopterin reductaseQuickGO ontologyBLASTP
23156302315995366possible inner membrane proteinQuickGO ontologyBLASTP
23160642317023960probable 85 complex protein A85 antigen familyQuickGO ontologyBLASTP
2316979232851911541non-ribosomal peptide synthetaseQuickGO ontologyBLASTP
232850623293668613-hydroxybutyryl-CoA dehydrogenaseQuickGO ontologyBLASTP
232936323337934431probable polyketide synthaseQuickGO ontologyBLASTP
233381423429549141non-ribosomal peptide synthetaseQuickGO ontologyBLASTP
234294723444881542non-ribosomal peptide synthetaseQuickGO ontologyBLASTP