Pre_GI: BLASTP Hits

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Query: NC_007948:4646344:4672616 Polaromonas sp. JS666, complete genome

Start: 4672616, End: 4672984, Length: 369

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015724:339500:351931351931352311381Cupriavidus necator N-1 plasmid BB2p, complete sequenceendoribonuclease L-PSP3e-51200
NC_007948:4620661:464117646411764641538363Polaromonas sp. JS666, complete genomeEndoribonuclease L-PSP8e-38155
NC_008752:620802:625054625054625431378Acidovorax avenae subsp. citrulli AAC00-1, complete genomeEndoribonuclease L-PSP1e-27121
NC_002947:4994335:503248050324805032833354Pseudomonas putida KT2440, complete genomehypothetical protein1e-26118
NC_008700:3927896:394708839470883947441354Shewanella amazonensis SB2B, complete genomeconserved hypothetical translation initiation inhibitor, YjgF family2e-23107
NC_014924:1701952:172350917235091723853345Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeEndoribonuclease L-PSP1e-21102
NC_016147:1788219:179286217928621793203342Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeendoribonuclease l-psp protein9e-22102
NC_010611:208268:231345231345231698354Acinetobacter baumannii ACICU, complete genomeputative translation initiation inhibitor, yjgF family7e-2199
NC_011144:2674242:269121226912122691571360Phenylobacterium zucineum HLK1, complete genometranslation initiation inhibitor, yjgF family9e-2095.5
NC_016513:1859767:186698918669891867342354Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeputative translation initiation inhibitor1e-1995.1
NC_013416:1526920:153183815318381532191354Aggregatibacter actinomycetemcomitans D11S-1, complete genomeputative translation initiation inhibitor, YjgF family protein1e-1995.1
NC_013757:1343396:135492513549251355287363Geodermatophilus obscurus DSM 43160, complete genomeEndoribonuclease L-PSP5e-1993.2
NC_016027:2446806:244789724478972448247351Gluconacetobacter xylinus NBRC 3288, complete genometranslation initiation inhibitor5e-1889.7
NC_010125:955863:957436957436957786351Gluconacetobacter diazotrophicus PAl 5, complete genomeputative endoribonuclease7e-1889.4
NC_007948:4646344:465957146595714659939369Polaromonas sp. JS666, complete genomeEndoribonuclease L-PSP5e-1786.7
NC_007948:4558000:457382245738224574193372Polaromonas sp. JS666, complete genomeEndoribonuclease L-PSP8e-1785.9
NC_015136:2282488:232364623236462323990345Burkholderia sp. CCGE1001 chromosome 1, complete sequenceendoribonuclease L-PSP2e-1580.9
NC_006677:1255079:125996212599621260312351Gluconobacter oxydans 621H, complete genomehypothetical protein5e-1476.6
NC_013209:2582878:261799526179952618345351Acetobacter pasteurianus IFO 3283-01, complete genometranslation initiation inhibitor YjgF5e-1476.3
NC_016002:2825017:283421028342102834527318Pseudogulbenkiania sp. NH8B, complete genomeendoribonuclease L-PSP family protein4e-1373.6
NC_009085:1232890:125221212522121252520309Acinetobacter baumannii ATCC 17978, complete genomehypothetical protein6e-1372.8
NC_013282:2582720:260612826061282606472345Cronobacter turicensis, complete genomeUPF0076 protein yoaB2e-1271.2
NC_010645:1341475:136041313604131360799387Bordetella avium 197N, complete genomeendoribonuclease9e-1165.5
NC_004129:926479:930194930194930571378Pseudomonas fluorescens Pf-5, complete genomeendoribonuclease, putative1e-1065.5
NC_015727:1076927:108296410829641083347384Cupriavidus necator N-1 plasmid BB1p, complete sequenceendoribonuclease L-PSP family protein 65e-1063.2
NC_014221:398636:411607411607411999393Truepera radiovictrix DSM 17093 chromosome, complete genomeendoribonuclease L-PSP7e-1062.8
NC_009481:676478:688498688498688896399Synechococcus sp. WH 7803 chromosome, complete genomeputative translation initiation inhibitor8e-1062.4
NC_008698:560529:563553563553563933381Thermofilum pendens Hrk 5, complete genomeputative endoribonuclease L-PSP1e-0962
NC_014632:11925:310333103331416384Ilyobacter polytropus DSM 2926 chromosome, complete genomeendoribonuclease L-PSP2e-0961.2
NC_008319:1727686:173335017333501733754405Synechococcus sp. CC9311, complete genomeputative endoribonuclease L-PSP2e-0960.8
NC_012669:96966:100822100822101265444Beutenbergia cavernae DSM 12333, complete genomeEndoribonuclease L-PSP4e-0960.1
NC_019978:1022209:102664010266401027026387Halobacteroides halobius DSM 5150, complete genomeendoribonuclease L-PSP, putative4e-0960.1
NC_012489:1874415:187402618740261874418393Gemmatimonas aurantiaca T-27, complete genomeputative endoribonuclease5e-0959.7
NC_016025:807226:829399829399829797399Candidatus Chloracidobacterium thermophilum B chromosome chromosomeendoribonuclease L-PSP9e-0958.9
NC_016791:1980844:200449120044912004871381Clostridium sp. BNL1100 chromosome, complete genomeendoribonuclease L-PSP2e-0858.2
NC_017277:3083494:311081331108133111205393Synechocystis sp. PCC 6803, complete genomehypothetical protein2e-0857.8
NC_013744:159861:178667178667179047381Haloterrigena turkmenica DSM 5511 plasmid pHTUR01, completeendoribonuclease L-PSP3e-0857.4
NC_016885:809000:814549814549814929381Pyrobaculum oguniense TE7 chromosome, complete genomeendoribonuclease L-PSP3e-0857
NC_011979:2352961:238206923820692382455387Geobacter sp. FRC-32, complete genomeendoribonuclease L-PSP3e-0857
NC_014632:113420:126595126595126978384Ilyobacter polytropus DSM 2926 chromosome, complete genomeendoribonuclease L-PSP4e-0857
NC_010465:660207:668352668352668732381Yersinia pseudotuberculosis YPIII, complete genomeendoribonuclease L-PSP5e-0856.6
NC_006155:4062000:407068240706824071062381Yersinia pseudotuberculosis IP 32953, complete genomeputative translational inhibitor protein5e-0856.6
NC_010159:1071937:107785110778511078231381Yersinia pestis Angola, complete genomeputative endoribonuclease L-PSP5e-0856.6
NC_008150:3495851:350498335049833505363381Yersinia pestis Antiqua, complete genomeputative translational inhibitor protein5e-0856.6
NC_003143:675622:688077688077688457381Yersinia pestis CO92, complete genomeputative translational inhibitor protein5e-0856.6
NC_010634:4001154:401088840108884011268381Yersinia pseudotuberculosis PB1/+, complete genomeendoribonuclease L-PSP5e-0856.6
NC_004088:3923804:393208239320823932462381Yersinia pestis KIM, complete genomehypothetical protein5e-0856.6
NC_005810:3272765:328090632809063281286381Yersinia pestis biovar Microtus str. 91001, complete genomeputative translational inhibitor protein5e-0856.6
NC_008149:587689:599607599607599987381Yersinia pestis Nepal516, complete genometranslational inhibitor protein5e-0856.6
NC_020272:3396800:342115334211533421530378Bacillus amyloliquefaciens IT-45, complete genomehypothetical protein5e-0856.6
NC_009708:633054:641199641199641579381Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeendoribonuclease L-PSP5e-0856.6
NC_017265:3790750:379744437974443797824381Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative translational inhibitor protein5e-0856.6
NC_017160:676249:685923685923686303381Yersinia pestis D182038 chromosome, complete genomeputative translational inhibitor protein5e-0856.6
NC_017154:671816:683738683738684118381Yersinia pestis D106004 chromosome, complete genomeputative translational inhibitor protein5e-0856.6
NC_014029:729675:741586741586741966381Yersinia pestis Z176003 chromosome, complete genomeputative translational inhibitor protein5e-0856.6
NC_009381:460358:470044470044470424381Yersinia pestis Pestoides F chromosome, complete genometranslational inhibitor protein5e-0856.6
NC_011297:1167615:117385711738571174234378Dictyoglomus thermophilum H-6-12, complete genomeendoribonuclease L-PSP7e-0856.2
NC_015144:1526669:153075515307551531147393Weeksella virosa DSM 16922 chromosome, complete genomeendoribonuclease L-PSP8e-0855.8
NC_014328:4387303:438918143891814389555375Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative endoribonuclease L-PSP1e-0755.5
NC_009840:544816:562030562030562422393Prochlorococcus marinus str. MIT 9215, complete genomePutative translation initiation inhibitor, yjgF family1e-0755.5
NC_009802:1827138:184306818430681843502435Campylobacter concisus 13826, complete genomeputative endoribonuclease L-PSP1e-0755.5
NC_007577:503440:520657520657521049393Prochlorococcus marinus str. MIT 9312, complete genomeYjgF-like protein1e-0755.1
NC_008817:539349:556560556560556952393Prochlorococcus marinus str. MIT 9515, complete genomePutative translation initiation inhibitor, yjgF family1e-0755.1
NC_014364:2904443:290909329090932909467375Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeendoribonuclease L-PSP2e-0754.7
NC_005072:508827:526041526041526433393Prochlorococcus marinus subsp. pastoris str. CCMP1986, completehypothetical protein2e-0754.3
AC_000091:4472000:447520744752074475593387Escherichia coli W3110 DNA, complete genomeketoacid-binding protein2e-0754.3
NC_010473:4564590:457035845703584570744387Escherichia coli str. K-12 substr. DH10B, complete genomeketoacid-binding protein2e-0754.3
NC_007613:4217557:425144742514474251872426Shigella boydii Sb227, complete genomehypothetical protein2e-0754.3
NC_000913:4462782:446855044685504468936387Escherichia coli K12, complete genomeketoacid-binding protein2e-0754.3
NC_011742:4795733:479996147999614800347387Escherichia coli S88 chromosome, complete genomeketoacid-binding protein2e-0754.3
NC_012947:3947238:395991839599183960304387Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeendoribonuclease L-PSP2e-0754.3
NC_012967:4449576:445380444538044454190387Escherichia coli B str. REL606 chromosome, complete genomeketoacid-binding protein2e-0754.3
NC_010658:4494103:450877145087714509157387Shigella boydii CDC 3083-94, complete genomeputative endoribonuclease L-PSP2e-0754.3
NC_010498:4821519:482574748257474826172426Escherichia coli SMS-3-5, complete genomeputative endoribonuclease L-PSP2e-0754.3
NC_011126:129937:135039135039135419381Hydrogenobaculum sp. Y04AAS1, complete genomeendoribonuclease L-PSP3e-0753.9
NC_015733:2581324:260361526036152603959345Pseudomonas putida S16 chromosome, complete genomeendoribonuclease L-PSP family protein3e-0753.9
NC_021066:1712905:172235817223581722735378Raoultella ornithinolytica B6, complete genomeendoribonuclease L-PSP3e-0753.9
NC_020063:4170464:418221241822124182598387Enterobacteriaceae bacterium strain FGI 57, complete genomeendoribonuclease L-PSP, putative3e-0753.9
NC_007511:3512100:352445935244593524809351Burkholderia sp. 383 chromosome 2, complete sequenceEndoribonuclease L-PSP4e-0753.5
NC_014618:586240:610365610365610754390Enterobacter cloacae SCF1 chromosome, complete genomeendoribonuclease L-PSP4e-0753.5
NC_015873:1411718:141171814117181412104387Megasphaera elsdenii DSM 20460, complete genomeputative endoribonuclease L-PSP5e-0753.1
NC_012121:139741:149032149032149412381Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative purine regulatory protein5e-0753.1
NC_015500:2417041:243375424337542434122369Treponema brennaborense DSM 12168 chromosome, complete genomeendoribonuclease L-PSP7e-0752.8
NC_005070:1486496:148833414883341488741408Synechococcus sp. WH 8102, complete genomeputative translation initiation inhibitor9e-0752.4
NC_005042:513931:532072532072532470399Prochlorococcus marinus subsp. marinus str. CCMP1375, completePutative translation initiation inhibitor9e-0752.4
NC_016077:2044876:205277020527702053153384Acidaminococcus intestini RyC-MR95 chromosome, complete genomeendoribonuclease L-PSP2e-0651.6
NC_009614:3714770:372855137285513728928378Bacteroides vulgatus ATCC 8482 chromosome, complete genomeendoribonuclease L-PSP1e-0651.6
NC_013385:90331:993919939199813423Ammonifex degensii KC4, complete genomeendoribonuclease L-PSP1e-0651.6
NC_013501:931418:931418931418931816399Rhodothermus marinus DSM 4252, complete genomeendoribonuclease L-PSP4e-0650.4
NC_015966:2337833:235673623567362357134399Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeendoribonuclease L-PSP4e-0650.4
NC_015666:1293500:129843212984321298812381Halopiger xanaduensis SH-6 chromosome, complete genomeendoribonuclease L-PSP4e-0650.1
NC_006087:28490:633956339563799405Leifsonia xyli subsp. xyli str. CTCB07, complete genomeprotein synthesis inhibitor7e-0649.3