Pre_GI: BLASTP Hits

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Query: NC_007492:6372900:6405917 Pseudomonas fluorescens PfO-1, complete genome

Start: 6405917, End: 6406774, Length: 858

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011386:931140:942349942349943251903Oligotropha carboxidovorans OM5, complete genometranscriptional regulator, AraC-family5e-49194
NC_015684:3157941:318130731813073182107801Oligotropha carboxidovorans OM5 chromosome, complete genomeAraC family transcriptional regulator2e-48192
NC_007348:1903937:192325319232531923978726Ralstonia eutropha JMP134 chromosome 2, complete sequenceHelix-turn-helix, AraC type2e-43176
NC_002516:4285477:428779442877944288606813Pseudomonas aeruginosa PAO1, complete genomeprobable transcriptional regulator2e-42172
NC_011770:1226923:124137212413721242184813Pseudomonas aeruginosa LESB58, complete genomeputative transcriptional regulator3e-42172
NC_008463:1223012:123718312371831237995813Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative transcriptional regulator3e-42172
NC_010512:866932:867480867480868280801Burkholderia cenocepacia MC0-3 chromosome 3, complete sequencetranscriptional regulator, AraC family7e-39160
NC_009483:936000:937489937489938325837Geobacter uraniireducens Rf4 chromosome, complete genomehelix-turn-helix domain-containing protein3e-38159
NC_009656:4527457:455663845566384557474837Pseudomonas aeruginosa PA7 chromosome, complete genomeputative HTH-type transcriptional regulator YeaM2e-38159
NC_018080:1100047:111602911160291116757729Pseudomonas aeruginosa DK2 chromosome, complete genometranscriptional regulator4e-38158
NC_014840:76232:754807548076235756Pantoea sp. At-9b plasmid pPAT9B03, complete sequencetranscriptional regulator, AraC family4e-36151
NC_013956:1762171:178360717836071784491885Pantoea ananatis LMG 20103 chromosome, complete genomeYeaM7e-36150
NC_016845:2729654:274359227435922744359768Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative AraC-type regulatory protein5e-34145
NC_012731:2693091:270144927014492702216768Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeAraC family transcriptional regulator5e-34145
NC_009648:1956070:196782919678291968596768Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative ARAC-type regulatory protein6e-34144
NC_011283:2627050:263208426320842632851768Klebsiella pneumoniae 342 chromosome, complete genomeAraC family transcriptional regulator7e-34144
NC_013850:2624899:262993326299332630700768Klebsiella variicola At-22 chromosome, complete genomeAraC protein arabinose-binding/dimerization3e-33142
NC_012560:201237:213263213263214153891Azotobacter vinelandii DJ, complete genomeTranscriptional regulator, AraC-family3e-32139
NC_021150:201237:213263213263214153891Azotobacter vinelandii CA6, complete genomeTranscriptional regulator, AraC-family3e-32139
NC_009040:43791:590355903559835801Rhodobacter sphaeroides ATCC 17029 plasmid pRSPH01, completetranscriptional regulator, AraC family6e-32137
NC_007511:3080849:308140230814023082220819Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, AraC family7e-32137
NC_008543:259450:277247277247278065819Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetranscriptional regulator, AraC family8e-32137
NC_008391:2253188:227088422708842271702819Burkholderia cepacia AMMD chromosome 2, complete sequencetranscriptional regulator, AraC family3e-31135
NC_010552:293703:319588319588320406819Burkholderia ambifaria MC40-6 chromosome 2, complete sequencetranscriptional regulator, AraC family3e-31135
NC_005296:5238882:525889052588905259636747Rhodopseudomonas palustris CGA009, complete genomeCUPIN domain:transcriptional regulator, AraC family8e-30130
NC_014500:1862000:188072318807231881490768Dickeya dadantii 3937 chromosome, complete genomeAraC family transcriptional regulator5e-29128
NC_011004:5520771:554078055407805541526747Rhodopseudomonas palustris TIE-1, complete genometranscriptional regulator, AraC family5e-29128
NC_015968:2110175:212686921268692127654786Enterobacter asburiae LF7a chromosome, complete genomeAraC family transcriptional regulator5e-29128
NC_014540:1835493:184139518413951842174780Burkholderia sp. CCGE1003 chromosome 2, complete sequenceAraC family transcriptional regulator4e-29128
NC_014323:992978:102778110277811028596816Herbaspirillum seropedicae SmR1 chromosome, complete genomeAraC family transcription regulator protein6e-29127
NC_020126:3426439:343244534324453433212768Myxococcus stipitatus DSM 14675, complete genomeAraC family transcriptional regulator8e-29127
NC_008543:90312:919879198792808822Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetranscriptional regulator, AraC family9e-29127
NC_008700:3927896:393709039370903937857768Shewanella amazonensis SB2B, complete genomeAraC-type DNA-binding domain-containing protein4e-28125
NC_011883:487187:506470506470507279810Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,transcriptional regulator, AraC family3e-28125
NC_011283:2627050:263595226359522636752801Klebsiella pneumoniae 342 chromosome, complete genomeAraC family transcriptional regulator3e-28125
NC_008061:2153495:217696521769652177786822Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, AraC family6e-28124
NC_012731:2693091:269821426982142699014801Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeAraC family transcriptional regulator7e-28124
NC_009648:1956070:196297019629701963770801Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative ARAC-type regulatory protein7e-28124
NC_007802:3807500:381372638137263814487762Jannaschia sp. CCS1, complete genometranscriptional regulator, AraC family1e-27124
NC_013850:2624899:263287526328752633648774Klebsiella variicola At-22 chromosome, complete genomeAraC protein arabinose-binding/dimerization2e-27123
NC_016027:2580477:259361925936192594443825Gluconacetobacter xylinus NBRC 3288, complete genometranscriptional regulator3e-27122
NC_014121:2514544:253240025324002533191792Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeAraC family transcriptional regulator5e-27121
NC_012723:71637:914479144792229783Burkholderia glumae BGR1 plasmid bglu_1p, complete sequenceTranscriptional Regulator, AraC family protein1e-26120
NC_016628:763833:765986765986766717732Vibrio furnissii NCTC 11218 chromosome 2, complete sequenceAraC family transcriptional regulator8e-25114
NC_010943:2815865:283222528322252833019795Stenotrophomonas maltophilia K279a, complete genomeputative transcriptional regulator7e-25114
NC_014118:987889:992476992476993264789Burkholderia sp. CCGE1002 chromosome chromosome 2, completetranscriptional regulator, AraC family1e-24113
NC_014666:5449884:547133154713315472074744Frankia sp. EuI1c chromosome, complete genometranscriptional regulator, AraC family3e-24112
NC_009654:304000:309532309532310299768Marinomonas sp. MWYL1, complete genomeAraC family transcriptional regulator1e-23110
NC_008228:2295841:230915323091532309944792Pseudoalteromonas atlantica T6c, complete genometranscriptional regulator, AraC family3e-23108
NC_009832:622969:642567642567643334768Serratia proteamaculans 568, complete genometranscriptional regulator, AraC family3e-23108
NC_010511:1691753:170494717049471705747801Methylobacterium sp. 4-46 chromosome, complete genomeAraC family transcriptional regulator1e-22106
NC_014966:1668822:167527516752751676093819Vibrio vulnificus MO6-24/O chromosome II, complete sequenceAraC family transcripitonal regulator4e-22105
NC_013850:3303500:330401633040163304807792Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, AraC family3e-22105
NC_008752:725189:755815755815756645831Acidovorax avenae subsp. citrulli AAC00-1, complete genometranscriptional regulator, AraC family3e-22105
NC_015663:1869000:188558618855861886341756Enterobacter aerogenes KCTC 2190 chromosome, complete genometranscriptional regulator7e-22104
NC_014541:1753776:175619617561961756999804Ferrimonas balearica DSM 9799 chromosome, complete genometranscriptional regulator, AraC family9e-22104
NC_009792:2688747:269857326985732699328756Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-21102
NC_014158:1479313:148723614872361488009774Tsukamurella paurometabola DSM 20162 chromosome, complete genomeAraC protein arabinose-binding/dimerization4e-21102
NC_012490:2660089:266542026654202666226807Rhodococcus erythropolis PR4, complete genomeAraC family transcriptional regulator5e-21101
NC_014931:4234288:426418542641854264967783Variovorax paradoxus EPS chromosome, complete genometranscriptional regulator, AraC family6e-21101
NC_014839:12519:319763197632758783Pantoea sp. At-9b plasmid pPAT9B02, complete sequencetranscriptional regulator, AraC family3e-2099.4
NC_018691:4619245:464288746428874643687801Alcanivorax dieselolei B5 chromosome, complete genomeputative transcriptional regulator5e-2098.6
NC_016628:1190366:120559712055971206388792Vibrio furnissii NCTC 11218 chromosome 2, complete sequenceAraC family transcriptional regulator5e-2098.2
NC_015637:325561:338615338615339502888Vibrio anguillarum 775 chromosome chromosome II, complete sequenceAraC family transcriptional regulator1e-1997.4
NC_015947:3991696:399428339942833995086804Burkholderia sp. JV3 chromosome, complete genomeAraC family transcriptional regulator6e-1994.7
NC_016582:3763476:376347637634763764261786Streptomyces bingchenggensis BCW-1 chromosome, complete genomeAraC family transcription regulator9e-1994.4
NC_014210:2747787:276307727630772763898822Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, AraC family2e-1893.2
NC_016628:763833:767654767654768496843Vibrio furnissii NCTC 11218 chromosome 2, complete sequencesubstrate-binding transcriptional regulator, AraC family protein2e-1892.8
NC_011887:72364:951569515695977822Methylobacterium nodulans ORS 2060 plasmid pMNOD02, completetranscriptional regulator, AraC family2e-1892.8
NC_014973:4503054:450961545096154510385771Geobacter sp. M18 chromosome, complete genomeAraC family transcriptional regulator3e-1892.4
NC_010694:63654:738347383474679846Erwinia tasmaniensis, complete genomeProbable transcriptional regulator2e-1790.1
NC_015663:3742738:375106637510663751380315Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative AraC-type regulatory protein2e-1789.7
NC_020260:2725201:272979427297942730303510Cronobacter sakazakii Sp291, complete genomeAraC family transcriptional regulator4e-1789
NC_010170:1551923:156014815601481560621474Bordetella petrii, complete genomeputative transcriptional regulator6e-1788.2
NC_014310:2017927:204064720406472041450804Ralstonia solanacearum PSI07 megaplasmid, complete sequencetranscriptional regulator1e-1687.4
NC_015277:2096266:210040521004052101220816Sphingobacterium sp. 21 chromosome, complete genometranscriptional regulator, AraC family2e-1686.7
NC_011071:4000620:400570140057014006504804Stenotrophomonas maltophilia R551-3, complete genometranscriptional regulator, AraC family8e-1684.3
NC_020209:47504:523785237852890513Pseudomonas poae RE*1-1-14, complete genomeAraC family transcriptional regulator5e-1581.6
NC_014837:33014:419974199742845849Pantoea sp. At-9b chromosome, complete genomeHelix-turn-helix, AraC domain-containing protein8e-1581.3
NC_013421:1696746:170689217068921707548657Pectobacterium wasabiae WPP163, complete genometranscriptional regulator, AraC family2e-1480.1
NC_020209:47504:921739217392502330Pseudomonas poae RE*1-1-14, complete genomeDNA-binding domain-containing protein6e-1271.6
NC_016845:2729654:273873327387332739047315Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative AraC-type regulatory protein2e-1170.1
NC_018524:5066720:508661950866195087341723Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomebacterial regulatory helix-turn-helix s, AraC family protein2e-1170.1
NC_016628:763833:780408780408780857450Vibrio furnissii NCTC 11218 chromosome 2, complete sequencesubstrate-binding transcriptional regulator, AraC family protein2e-1169.7
NC_014839:68308:782907829078913624Pantoea sp. At-9b plasmid pPAT9B02, complete sequencehypothetical protein8e-1167.8
NC_009921:6483660:649183664918366492549714Frankia sp. EAN1pec, complete genometranscriptional regulator, AraC family3e-1065.9
NC_009921:3551036:3574481357448135760221542Frankia sp. EAN1pec, complete genometranscriptional regulator, AraC family9e-1064.3
NC_007963:814148:840043840043840843801Chromohalobacter salexigens DSM 3043, complete genometranscriptional regulator, AraC family1e-0963.9
NC_007802:1240989:125477712547771255535759Jannaschia sp. CCS1, complete genometranscriptional regulator, AraC family1e-0963.5
NC_015859:3177199:3208944320894432104971554Corynebacterium variabile DSM 44702 chromosome, complete genomeAraC DNA-binding transcription regulator8e-0961.2
NC_014121:3188928:320787632078763208088213Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein1e-0860.8
NC_015577:3621777:363507336350733635843771Treponema azotonutricium ZAS-9 chromosome, complete genometwo-component response regulator YesN1e-0860.5
NC_008686:1383891:143018614301861430767582Paracoccus denitrificans PD1222 chromosome 1, complete sequencehelix-turn-helix- domain containing protein, AraC type3e-0859.3
NC_008782:1277117:129423112942311295220990Acidovorax sp. JS42, complete genometranscriptional regulator, AraC family4e-0858.9
NC_013729:6217500:623254162325416233518978Kribbella flavida DSM 17836, complete genometranscriptional regulator, AraC family8e-0857.8
NC_016816:2508204:250921625092162510118903Pantoea ananatis LMG 5342, complete genomeAraC family transcriptional regulator9e-0857.8
NC_013956:1994970:201277120127712013718948Pantoea ananatis LMG 20103 chromosome, complete genomeYkgD1e-0757.4
NC_014844:762794:781918781918782757840Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeAraC type helix-turn-helix- domain-containing protein2e-0757
NC_016626:1825845:185472818547281855714987Burkholderia sp. YI23 plasmid byi_1p, complete sequenceAraC family transcriptional regulator1e-0757
NC_004369:531579:558983558983559948966Corynebacterium efficiens YS-314, complete genomehypothetical protein2e-0756.6
NC_016612:5231065:525519452551945255376183Klebsiella oxytoca KCTC 1686 chromosome, complete genomeAraC family transcriptional regulator2e-0756.2
NC_011884:2422000:2433017243301724340331017Cyanothece sp. PCC 7425, complete genometranscriptional regulator, AraC family3e-0756.2
NC_014718:791528:795900795900796277378Burkholderia rhizoxinica HKI 454 chromosome, complete genomeTranscriptional regulator, AraC family4e-0755.5
NC_003197:1170746:117274611727461173525780Salmonella typhimurium LT2, complete genomebacterial regulatory protein8e-0754.7
NC_016810:1126693:112906811290681129847780Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator8e-0754.7
NC_016856:1128715:113109011310901131869780Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sregulatory protein8e-0754.7
NC_016860:1168431:117043111704311171210780Salmonella enterica subsp. enterica serovar Typhimurium strAraC family transcriptional regulator8e-0754.7
NC_016863:1128381:113038111303811131160780Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1regulatory protein8e-0754.7
NC_003155:6295078:6296882629688262979071026Streptomyces avermitilis MA-4680, complete genomeAraC-family transcriptional regulator8e-0754.7
NC_018691:4619245:4644618464461846456521035Alcanivorax dieselolei B5 chromosome, complete genomeTranscriptional regulator, AraC family protein8e-0754.7
NC_012912:4071859:408833840883384089192855Dickeya zeae Ech1591, complete genometranscriptional regulator, AraC family1e-0654.3
NC_016831:1950650:196440919644091965197789Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative transcriptional regulator1e-0654.3
NC_011149:1035990:104229310422931043081789Salmonella enterica subsp. enterica serovar Agona str. SL483,bacterial regulatory protein9e-0754.3
NC_011083:1173802:117746211774621178250789Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,bacterial regulatory protein9e-0754.3
NC_011094:1127983:113164311316431132431789Salmonella enterica subsp. enterica serovar Schwarzengrund strregulatory protein9e-0754.3
NC_012125:2687980:270174127017412702529789Salmonella enterica subsp. enterica serovar Paratyphi C strainAraC family transcriptional regulator9e-0754.3
NC_016857:1126693:112900511290051129847843Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74regulatory protein8e-0754.3
NC_017046:1127325:112926211292621130104843Salmonella enterica subsp. enterica serovar Typhimurium str. 798transcriptional regulator8e-0754.3
NC_014837:387868:409063409063410022960Pantoea sp. At-9b chromosome, complete genomeAraC family transcriptional regulator1e-0653.9
NC_018691:761560:7629207629207639421023Alcanivorax dieselolei B5 chromosome, complete genomePutative AraC family transcription regulator1e-0653.9
NC_015434:1885373:188757818875781888468891Verrucosispora maris AB-18-032 chromosome, complete genomehelix-turn-helix, arac domain-containing protein1e-0653.9
NC_010102:2020762:203451220345122035300789Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-0653.9
NC_014008:669170:679249679249680019771Coraliomargarita akajimensis DSM 45221 chromosome, complete genometranscriptional regulator, AraC family1e-0653.9
NC_011205:1147556:115121611512161152004789Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853AraC family transcriptional regulator1e-0653.9
NC_006511:1808815:182479918247991825578780Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCbacterial regulatory protein, AraC family1e-0653.9
NC_011147:1802535:181998218199821820761780Salmonella enterica subsp. enterica serovar Paratyphi A straraC family transcriptional regulator1e-0653.9
NC_011294:1048223:105059810505981051377780Salmonella enterica subsp. enterica serovar Enteritidis strtranscriptional regulator1e-0653.9
NC_016832:1880174:189439218943921894934543Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Bacterial regulatory protein, AraC2e-0653.5
NC_014538:985339:9853399853399869311593Thermoanaerobacter sp. X513 chromosome, complete genomeAraC family two component transcriptional regulator2e-0653.5
NC_010320:1949852:1967413196741319690051593Thermoanaerobacter sp. X514 chromosome, complete genomeresponse regulator receiver protein2e-0653.5
NC_014618:57707:577075770758609903Enterobacter cloacae SCF1 chromosome, complete genomeAraC family transcriptional regulator2e-0653.5
NC_003198:1078113:1081781108178110832711491Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative transcriptional regulator (pseudogene)3e-0652.8
NC_017986:5467279:546819554681955469016822Pseudomonas putida ND6 chromosome, complete genomeAraC family transcriptional regulator3e-0652.8
NC_009512:3068495:308791530879153088736822Pseudomonas putida F1, complete genomehelix-turn-helix- domain containing protein, AraC type3e-0652.8
NC_016514:1627664:162959516295951630386792Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YbcM3e-0652.8
NC_012669:2399649:240303224030322403997966Beutenbergia cavernae DSM 12333, complete genometranscriptional regulator, AraC family6e-0651.6
NC_015663:1356982:138623613862361387189954Enterobacter aerogenes KCTC 2190 chromosome, complete genomeAraC family transcriptional regulator7e-0651.6
NC_011757:5102732:512939951293995130358960Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, AraC family9e-0651.2