Pre_GI Gene

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Host: NC_008543 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008543:90312 Burkholderia cenocepacia HI2424 chromosome 2, complete sequence

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
90312919491638AMP-dependent synthetase and ligaseQuickGO ontologyBLASTP
9198792808822transcriptional regulator AraC familyQuickGO ontologyBLASTP
9302793791765Enoyl-CoA hydrataseisomeraseQuickGO ontologyBLASTP
9379494573780CreatininaseQuickGO ontologyBLASTP
94864960181155luciferase family proteinQuickGO ontologyBLASTP
9602396811789Enoyl-CoA hydrataseisomeraseQuickGO ontologyBLASTP
96808987151908AMP-dependent synthetase and ligaseQuickGO ontologyBLASTP
9880699387582flavin reductase domain protein FMN-bindingQuickGO ontologyBLASTP
996411014401800Integrase catalytic regionQuickGO ontologyBLASTP
101450102319870TniB family proteinQuickGO ontologyBLASTP
102300102824525hypothetical proteinBLASTP
102833103174342hypothetical proteinBLASTP
1032611034792194-oxalocrotonate tautomeraseQuickGO ontologyBLASTP
1035381047461209aminotransferase class I and IIQuickGO ontologyBLASTP
1051271062361110NADHflavin oxidoreductaseNADH oxidaseQuickGO ontologyBLASTP
106385107065681DSBA oxidoreductaseQuickGO ontologyBLASTP
107135107476342alkylhydroperoxidase like protein AhpD familyQuickGO ontologyBLASTP
107603108166564transcriptional regulator TetR familyQuickGO ontologyBLASTP
108525109079555OsmC family proteinQuickGO ontologyBLASTP
109232110002771short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP