Pre_GI: BLASTP Hits

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Query: NC_006361:3047788:3061213 Nocardia farcinica IFM 10152, complete genome

Start: 3061213, End: 3061884, Length: 672

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016887:3201976:320721632072163207887672Nocardia cyriacigeorgica GUH-2, complete genomeputative two-component system response regulator1e-125448
NC_008726:6335961:636620263662026366543342Mycobacterium vanbaalenii PYR-1, complete genomeresponse regulator receiver protein5e-1684.7
NC_016887:3201976:320315732031573203894738Nocardia cyriacigeorgica GUH-2, complete genomeputative two-component system response regulator, LuxR family5e-1684.7
NC_016114:3275004:328292532829253283557633Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeLuxR family transcriptional regulator4e-1271.6
NC_013037:2043921:206658620665862067209624Dyadobacter fermentans DSM 18053, complete genometwo component transcriptional regulator, LuxR family5e-1167.8
NC_020054:2147857:215246421524642153132669Fibrella aestuarina BUZ 2 drat genometwo component transcriptional regulator, LuxR family6e-1167.8
NC_013730:834500:857155857155857811657Spirosoma linguale DSM 74, complete genometwo component transcriptional regulator, LuxR family6e-1167.8
NC_013501:1140390:115172711517271152362636Rhodothermus marinus DSM 4252, complete genometwo component transcriptional regulator, LuxR family8e-1167.4
NC_014960:1697818:172914817291481729801654Anaerolinea thermophila UNI-1, complete genomeNarL family two-component response regulator2e-1065.9
NC_016887:2269177:229490122949012295518618Nocardia cyriacigeorgica GUH-2, complete genomeresponse regulator, two-component system2e-1065.9
NC_010572:188500:209287209287209964678Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative two-component system response regulator4e-1065.1
NC_007005:2191500:221341922134192214087669Pseudomonas syringae pv. syringae B728a, complete genomeregulatory protein, LuxR:Response regulator receiver5e-1064.7
NC_012660:3179980:320614832061483206801654Pseudomonas fluorescens SBW25 chromosome, complete genomeputative two-component system response regulator5e-1064.7
NC_012962:869295:873436873436874068633Photorhabdus asymbiotica, complete genometwo-component response regulator. hexose phosphate transport syste regulatory protein uhpa1e-0963.5
NC_006087:345976:347512347512348201690Leifsonia xyli subsp. xyli str. CTCB07, complete genome2e-0963.2
NC_012796:3267569:331239733123973313032636Desulfovibrio magneticus RS-1, complete genomeNarL family two-component response regulator2e-0962.4
NC_008321:2649781:265542726554272656092666Shewanella sp. MR-4, complete genometwo component transcriptional regulator, LuxR family4e-0961.6
NC_015683:2469481:247103224710322471670639Corynebacterium ulcerans BR-AD22 chromosome, complete genometwo-component system transcriptional regulator6e-0960.8
NC_008322:2716676:272338927233892724054666Shewanella sp. MR-7, complete genometwo component transcriptional regulator, LuxR family1e-0860.1
NC_009142:2565561:258504625850462585729684Saccharopolyspora erythraea NRRL 2338, complete genomeresponse regulator, two-component system1e-0860.1
NC_015497:2859724:287195728719572872604648Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genometwo component transcriptional regulator, LuxR family1e-0860.1
NC_004547:2285092:230556023055602306210651Erwinia carotovora subsp. atroseptica SCRI1043, complete genomenitrate/nitrite response regulator2e-0859.3
NC_013173:2305394:231684223168422317501660Desulfomicrobium baculatum DSM 4028, complete genometwo component transcriptional regulator, LuxR family3e-0858.9
NC_014837:1570500:157467515746751575334660Pantoea sp. At-9b chromosome, complete genomeLuxR family two component transcriptional regulator3e-0858.9
NC_016887:3255500:326288632628863263536651Nocardia cyriacigeorgica GUH-2, complete genomeLuxR family two component transcriptional regulator3e-0858.5
NC_010627:532407:532407532407533048642Burkholderia phymatum STM815 plasmid pBPHY02, complete sequencetwo component transcriptional regulator, LuxR family5e-0857.8
NC_003272:2560329:256736625673662567995630Nostoc sp. PCC 7120, complete genometwo-component response regulator6e-0857.8
NC_014844:659829:693730693730694356627Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeresponse regulator receiver7e-0857.4
NC_016599:3616204:363452036345203635173654Owenweeksia hongkongensis DSM 17368 chromosome, complete genomeresponse regulator containing a CheY-like receiver domain and an HTH DNA-binding domain7e-0857.4
NC_016816:2953530:298141929814192982078660Pantoea ananatis LMG 5342, complete genomeLuxR family two component transcriptional regulator9e-0857
NC_007907:4692336:471296347129634713610648Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-0757
NC_006513:1379735:140149814014981402118621Azoarcus sp. EbN1, complete genometwo-component response regulator1e-0757
NC_006177:520055:533611533611534207597Symbiobacterium thermophilum IAM 14863, complete genometwo-component response regulator1e-0757
NC_013508:2130681:215927421592742159930657Edwardsiella tarda EIB202, complete genometwo-component transcriptional regulator, LuxR family2e-0756.2
NC_009328:448224:494722494722495354633Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeDNA-binding response regulator2e-0755.8
NC_016514:2950860:295268929526892953345657Enterobacter cloacae EcWSU1 chromosome, complete genomeresponse regulator uvrY2e-0755.8
NC_016801:394400:406743406743407444702Corynebacterium diphtheriae C7 (beta) chromosome, complete genometwo-component system response regulator2e-0755.8
NC_014562:2563466:257057225705722571219648Pantoea vagans C9-1 chromosome, complete genomeNitrate/nitrite response regulator protein3e-0755.5
NC_007907:5185510:524467952446795245317639Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-0755.5
NC_014829:3305762:330576233057623306394633Bacillus cellulosilyticus DSM 2522 chromosome, complete genometwo component transcriptional regulator, LuxR family4e-0755.1
NC_020995:2255521:225627422562742256903630Enterococcus casseliflavus EC20, complete genomeLuxR family DNA-binding response regulator4e-0755.1
NC_018581:4992952:501621750162175016894678Gordonia sp. KTR9 chromosome, complete genomeResponse regulator containing a CheY-like receiver domain and an HTH DNA-binding domain3e-0755.1
NC_005125:4283345:429527242952724295949678Gloeobacter violaceus PCC 7421, complete genometwo-component response regulator5e-0754.7
NC_016582:6811273:682559468255946826280687Streptomyces bingchenggensis BCW-1 chromosome, complete genometwo component LuxR family transcriptional regulator5e-0754.7
NC_013595:5176000:519685251968525197490639Streptosporangium roseum DSM 43021, complete genomeresponse regulator receiver protein5e-0754.7
NC_012779:2184927:218675221867522187408657Edwardsiella ictaluri 93-146, complete genomeresponse regulator UvrY6e-0754.3
NC_014394:2228470:223795022379502238585636Gallionella capsiferriformans ES-2 chromosome, complete genometwo component transcriptional regulator, LuxR family9e-0753.9
NC_018691:896464:906830906830907471642Alcanivorax dieselolei B5 chromosome, complete genomeTwo component transcriptional regulator, LuxR family8e-0753.9
NC_006351:142788:151956151956152618663Burkholderia pseudomallei K96243 chromosome 2, complete sequencetwo-component system response regulator8e-0753.9
NC_019757:2243796:224509122450912245771681Cylindrospermum stagnale PCC 7417, complete genomeresponse regulator containing a CheY-like receiver domain and an HTH DNA-binding domain7e-0753.9
NC_011146:2614500:262223026222302622880651Geobacter bemidjiensis Bem, complete genometwo component transcriptional regulator, LuxR family1e-0653.5
NC_008025:1799106:181593418159341816599666Deinococcus geothermalis DSM 11300, complete genometwo component transcriptional regulator, LuxR family1e-0653.5
NC_003197:3971905:399055439905543991144591Salmonella typhimurium LT2, complete genomeresponse regulator9e-0753.5
NC_011083:3985618:400476340047634005353591Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,transcriptional regulatory protein UhpA9e-0753.5
NC_016810:3993863:401186640118664012456591Salmonella enterica subsp. enterica serovar Typhimurium strtwo-component system response regulator protein9e-0753.5
NC_016856:3985597:400424640042464004836591Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SDNA-binding transcriptional activator UhpA9e-0753.5
NC_016860:4055117:409566540956654096255591Salmonella enterica subsp. enterica serovar Typhimurium strDNA-binding transcriptional activator UhpA9e-0753.5
NC_016863:3933848:395185339518533952443591Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1DNA-binding transcriptional activator UhpA9e-0753.5
NC_017046:3991551:401069440106944011284591Salmonella enterica subsp. enterica serovar Typhimurium str. 798two-component system response regulator protein9e-0753.5
NC_007435:1981164:199033219903321990994663Burkholderia pseudomallei 1710b chromosome II, complete sequenceDNA-binding response regulator1e-0653.1
NC_016857:3993864:401186740118674012520654Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74DNA-binding transcriptional activator UhpA1e-0653.1
NC_004337:3590323:390070439007043901294591Shigella flexneri 2a str. 301, complete genomeresponse regulator1e-0653.1
NC_015566:1941407:194834019483401948996657Serratia sp. AS12 chromosome, complete genometwo component LuxR family transcriptional regulator2e-0653.1
NC_012912:1701231:173674617367461737408663Dickeya zeae Ech1591, complete genometwo component transcriptional regulator, LuxR family2e-0652.8
NC_011830:1288984:130235713023571302995639Desulfitobacterium hafniense DCB-2, complete genometwo component transcriptional regulator, LuxR family2e-0652.8
NC_006511:1506915:153549215354921536130639Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative two-component response regulator3e-0652.4
NC_006905:1509093:151391015139101514548639Salmonella enterica subsp. enterica serovar Choleraesuis strSecretion system regulator: transcriptonal activator, homologous with degU/uvrY/bvgA3e-0652.4
NC_011147:1502096:153067315306731531311639Salmonella enterica subsp. enterica serovar Paratyphi A strtwo-component response regulator3e-0652.4
NC_012125:2360815:238933223893322389970639Salmonella enterica subsp. enterica serovar Paratyphi C straintwo-component response regulator3e-0652.4
NC_011601:4096427:415036341503634150953591Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeDNA-binding transcriptional activator UhpA2e-0652.4
NC_015224:2061951:207502520750252075681657Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,response regulator2e-0652.4
NC_008800:2013450:201632220163222016978657Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,response regulator2e-0652.4
NC_011149:3895921:391506639150663915656591Salmonella enterica subsp. enterica serovar Agona str. SL483,transcriptional regulatory protein UhpA2e-0652.4
NC_018720:993869:101953210195321020158627Bifidobacterium asteroides PRL2011 chromosome, complete genometwo component transcriptional regulator, LuxR family2e-0652.4
NC_011147:3755725:377436437743643774954591Salmonella enterica subsp. enterica serovar Paratyphi A strDNA-binding transcriptional activator UhpA2e-0652.4
NC_011094:3853036:387226638722663872856591Salmonella enterica subsp. enterica serovar Schwarzengrund strDNA-binding transcriptional activator UhpA2e-0652.4
NC_010102:3919999:393864839386483939238591Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-0652.4
NC_006511:3759550:377868537786853779275591Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCtwo-component system response regulator protein2e-0652.4
NC_011080:3941909:396113839611383961728591Salmonella enterica subsp. enterica serovar Newport str. SL254,transcriptional regulatory protein UhpA2e-0652.4
NC_011294:1723852:175236917523691753007639Salmonella enterica subsp. enterica serovar Enteritidis strtwo-component response regulator3e-0652
NC_011274:1763676:179219317921931792831639Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91two-component response regulator3e-0652
NC_011205:1852665:188118218811821881820639Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein3e-0652
NC_011094:1435347:144013414401341440772639Salmonella enterica subsp. enterica serovar Schwarzengrund strEsrB3e-0652
NC_010102:1616530:164510816451081645746639Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-0652
NC_011083:1476894:148168214816821482320639Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,EsrB3e-0652
NC_004631:1325817:133063413306341331272639Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative two-component response regulator3e-0652
NC_003197:1471349:147616714761671476805639Salmonella typhimurium LT2, complete genometranscriptional activator3e-0652
NC_007298:1129889:113127411312741131921648Dechloromonas aromatica RCB, complete genomeregulatory protein, LuxR:Response regulator receiver3e-0652
NC_016810:1428201:143301914330191433657639Salmonella enterica subsp. enterica serovar Typhimurium strputative two-component response regulator3e-0652
NC_016831:1236786:124160112416011242239639Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative two-component response regulator3e-0652
NC_016832:1324820:132960713296071330245639Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein3e-0652
NC_012803:1753138:177323917732391773913675Micrococcus luteus NCTC 2665, complete genomeresponse regulator containing a CheY-like receiver domain and an HTH DNA-binding domain3e-0652
NC_012125:3905782:392501239250123925665654Salmonella enterica subsp. enterica serovar Paratyphi C strainDNA-binding transcriptional activator UhpA3e-0652
NC_006905:3913988:393022039302203930873654Salmonella enterica subsp. enterica serovar Choleraesuis strresponse regulator (repressor) in two-component regulatory system wtih UhpB, regulates uhpT operon (LuxR/UhpA family)3e-0652
NC_011080:1470794:147560814756081476246639Salmonella enterica subsp. enterica serovar Newport str. SL254,EsrB3e-0652
NC_017046:1428272:143309014330901433728639Salmonella enterica subsp. enterica serovar Typhimurium str. 798two-component response regulator3e-0652
NC_016863:1429516:143433414343341434972639Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1transcriptional activator3e-0652
NC_016860:1469066:147385414738541474492639Salmonella enterica subsp. enterica serovar Typhimurium strputative two-component response regulator3e-0652
NC_016857:1428201:143301914330191433657639Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative two-component response regulator3e-0652
NC_016856:1481325:148614314861431486781639Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Stranscriptional activator3e-0652
NC_009455:820821:838232838232838861630Dehalococcoides sp. BAV1 chromosome, complete genometwo component LuxR family transcriptional regulator4e-0651.6
NC_002678:3701500:372794937279493728596648Mesorhizobium loti MAFF303099, complete genometwo-component system response regulator4e-0651.6
NC_009767:5464796:546773054677305468371642Roseiflexus castenholzii DSM 13941, complete genometwo component transcriptional regulator, LuxR family6e-0651.2
NC_012967:1967675:197269619726961973205510Escherichia coli B str. REL606 chromosome, complete genomeresponse regulator6e-0651.2
NC_008610:1068429:108364410836441084273630Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica),two component transcriptional regulator, LuxR family5e-0651.2
NC_010086:20876:442254422544869645Burkholderia multivorans ATCC 17616 chromosome 2, completetwo component transcriptional regulator, LuxR family5e-0651.2
NC_013595:196493:198184198184198825642Streptosporangium roseum DSM 43021, complete genomeresponse regulator receiver protein5e-0651.2
NC_015065:18189:387313873139354624Acidobacterium sp. MP5ACTX9 plasmid pACIX902, complete sequencetwo component transcriptional regulator, LuxR family7e-0650.8
NC_015376:1752883:175326617532661753910645Burkholderia gladioli BSR3 chromosome chromosome 2, completeDNA-binding response regulator, LuxR family8e-0650.8
NC_008825:2761499:277522827752282775896669Methylibium petroleiphilum PM1, complete genometwo-component response regulator8e-0650.8
NC_012669:96966:110175110175110840666Beutenbergia cavernae DSM 12333, complete genometwo component transcriptional regulator, LuxR family8e-0650.4
NC_003888:4031299:403129940312994032045747Streptomyces coelicolor A3(2), complete genometwo-component system regulator8e-0650.4
NC_015856:4975815:499871249987124999350639Collimonas fungivorans Ter331 chromosome, complete genometwo component LuxR family transcriptional regulator9e-0650.4
NC_016943:1314500:133087813308781331534657Blastococcus saxobsidens DD2, complete genomeLuxR family two component transcriptional regulator1e-0550.4