Pre_GI Gene

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Host: NC_006177 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006177:520055 Symbiobacterium thermophilum IAM 14863, complete genome

Host Lineage: Symbiobacterium thermophilum; Symbiobacterium; Shewanellaceae; Clostridiales; Firmicutes; Bacteria

General Information: This symbiotic and thermophilic bacterium was discovered by screening for thermostable tryptanophases in Japanese compost. Cultured growth of this organism requires the presence of another bacterial species, such as a Bacillus or Escherichia coli, which provides diffusable metabolites required for its growth. Pure cultures can be obtained by growing Symbiobacterium thermophilum in a bioreactor, separated from its symbiotic counterpart by a dialysis membrane. Because of its symbiotic nature, it cannot be cultured with conventional methods. Despite a negative reaction for gram stain, this species is placed with the gram-positive bacteria based on 16s phylogenetic analysis.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5200555218661812GTP-binding protein LepAQuickGO ontologyBLASTP
5219195231691251coproporphyrinogen III oxidaseQuickGO ontologyBLASTP
523273523563291hypothetical protein
523560524219660hypothetical protein
5243435257281386argininosuccinate lyaseQuickGO ontologyBLASTP
5285655302621698alkaline proteinaseQuickGO ontologyBLASTP
530325530984660amino acid ABC transporter permease proteinQuickGO ontologyBLASTP
530981531670690amino acid ABC transporter permease proteinQuickGO ontologyBLASTP
531674532501828amino acid ABC transporter substrate-binding proteinQuickGO ontologyBLASTP
532545533270726amino acid ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
533611534207597two-component response regulatorQuickGO ontologyBLASTP
5342435361441902two-component sensor histidine kinaseQuickGO ontologyBLASTP
536180536773594molybdopterin-guanine dinucleotide biosynthesis protein AQuickGO ontologyBLASTP
536793537680888hypothetical protein
537687538229543mutTnudix family proteinQuickGO ontologyBLASTP
538408538755348hypothetical protein glycine-richQuickGO ontology
538785539702918hypothetical protein
539921540538618hypothetical proteinBLASTP