Pre_GI Gene

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Host: NC_009455 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009455:820821 Dehalococcoides sp. BAV1 chromosome, complete genome

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
820821821414594indolepyruvate oxidoreductase subunit betaQuickGO ontologyBLASTP
821411821899489hypothetical protein
821914822114201hypothetical protein
822116822499384NifU domain-containing proteinQuickGO ontologyBLASTP
822668822922255hypothetical proteinBLASTP
8229328254182487heavy metal translocating P-type ATPaseQuickGO ontologyBLASTP
825516826004489heat shock protein Hsp20QuickGO ontologyBLASTP
826057826884828rubrerythrinQuickGO ontologyBLASTP
826914827492579manganese and iron superoxide dismutaseQuickGO ontologyBLASTP
827590828360771hypothetical proteinBLASTP
8288138309872175hypothetical protein
831000831857858hypothetical protein
8322648332801017hypothetical protein
8332778343831107phage integrase family proteinQuickGO ontologyBLASTP
8349608365101551reductive dehalogenaseQuickGO ontologyBLASTP
8371488382391092PASPAC sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
838232838861630two component LuxR family transcriptional regulatorQuickGO ontologyBLASTP
83907383914876tRNA-ArgQuickGO ontology
839311839619309Smr proteinMutS2QuickGO ontologyBLASTP