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Query: NC_004838:51013:96910 Yersinia pestis KIM plasmid pMT-1, complete sequence

Start: 96910, End: 97986, Length: 1077

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011891:4169796:417534641753464176296951Anaeromyxobacter dehalogenans 2CP-1, complete genomerecA protein4e-36152
NC_015696:105748:1134681134681145411074Francisella sp. TX077308 chromosome, complete genomeRecA protein5e-36152
NC_014014:153837:159532159532160515984Mycoplasma crocodyli MP145 chromosome, complete genomeRecombinase protein RecA6e-36151
NC_010673:113133:1270221270221280921071Borrelia hermsii DAH, complete genomeRecA protein2e-35150
NC_008095:1697157:1699253169925317002811029Myxococcus xanthus DK 1622, complete genomerecA protein2e-35150
NC_009943:1499111:1514181151418115152571077Candidatus Desulfococcus oleovorans Hxd3, complete genomerecA protein4e-35149
NC_010995:2547164:2564442256444225655031062Cellvibrio japonicus Ueda107, complete genomerecA protein6e-35148
NC_007760:4143301:414650341465034147453951Anaeromyxobacter dehalogenans 2CP-C, complete genomerecA protein5e-35148
NC_015711:346436:3622633622633632881026Myxococcus fulvus HW-1 chromosome, complete genomerecA protein1e-34147
NC_010336:733751:7458777458777469591083Francisella philomiragia subsp. philomiragia ATCC 25017, completeCalcium-transporting ATPase5e-34145
NC_015978:113656:1158181158181169301113Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completeprotein recA7e-34144
NC_020541:2769419:2794047279404727950841038Rhodanobacter sp. 2APBS1, complete genomeprotein RecA7e-34144
NC_006448:59654:6465464654658081155Streptococcus thermophilus LMG 18311, complete genomerecombinase A9e-34144
NC_006449:58436:6343763437645911155Streptococcus thermophilus CNRZ1066, complete genomerecombinase A9e-34144
NC_020126:1830147:1830147183014718311751029Myxococcus stipitatus DSM 14675, complete genomerecA protein1e-33144
NC_011653:1463743:1474359147435914754201062Thermosipho africanus TCF52B, complete genomeprotein RecA2e-33143
NC_015760:61345:6634866348674871140Streptococcus salivarius CCHSS3, complete genomerecombinase A4e-33142
NC_015391:695350:7006137006137016561044Carnobacterium sp. 17-4 chromosome, complete genomerecombinase A5e-33142
NC_004842:62000:6881068810698891080Anaplasma marginale str. St. Maries, complete genomerecombinase A9e-33141
NC_014484:1163576:1194050119405011951771128Spirochaeta thermophila DSM 6192 chromosome, complete genomeDNA integration/recombination/invertion protein2e-32140
NC_008767:1363288:1378364137836413794101047Neisseria meningitidis FAM18, complete genomeRecA protein1e-32140
NC_011035:933269:9332699332699343151047Neisseria gonorrhoeae NCCP11945 chromosome, complete genomerecombinase A1e-32140
NC_014921:688978:7147787147787157971020Mycoplasma fermentans M64 chromosome, complete genomeprotein reca1e-32140
NC_016842:748419:7603127603127615351224Treponema pallidum subsp. pertenue str. SamoaD chromosome, completerecombination protein A4e-32139
NC_015714:741044:7535937535937548161224Treponema paraluiscuniculi Cuniculi A chromosome, complete genomerecombination protein A4e-32139
NC_006350:845513:9033389033389044081071Burkholderia pseudomallei K96243 chromosome 1, complete sequencerecombinase A4e-32139
NC_007434:1001514:1022326102232610233961071Burkholderia pseudomallei 1710b chromosome I, complete sequencerecombinase A4e-32139
NC_009076:779407:7989687989688000381071Burkholderia pseudomallei 1106a chromosome I, complete sequencerecA protein4e-32139
NC_015381:3789661:3790785379078537918641080Burkholderia gladioli BSR3 chromosome 1, complete sequencerecombinase A5e-32139
NC_016843:747950:7604997604997617221224Treponema pallidum subsp. pertenue str. Gauthier chromosome,recombination protein A4e-32139
NC_016848:748873:7607667607667619891224Treponema pallidum subsp. pertenue str. CDC2 chromosome, completerecombination protein A4e-32139
NC_014760:299392:301427301427302419993Mycoplasma bovis PG45 chromosome, complete genomeRecA protein3e-32139
NC_021508:745388:7602087602087614311224Treponema pallidum subsp. pallidum SS14, complete genomerecombination protein A3e-32139
NC_016844:748117:7606667606667618891224Treponema pallidum subsp. pallidum DAL-1 chromosome, completerecombination protein A3e-32139
NC_010741:745357:7601777601777614001224Treponema pallidum subsp. pallidum SS14, complete genomeprotein RecA4e-32139
NC_000919:746875:7587297587297599521224Treponema pallidum subsp. pallidum str. Nichols, complete genomerecA protein (recA)4e-32139
NC_017268:747429:7599787599787612041227Treponema pallidum subsp. pallidum str. Chicago chromosome,protein RecA4e-32139
NC_016785:1407892:1436271143627114373891119Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomerecombinase A6e-32138
NC_016782:1450674:1458102145810214592201119Corynebacterium diphtheriae 241 chromosome, complete genomerecombinase A6e-32138
NC_002935:1461458:1469776146977614708941119Corynebacterium diphtheriae NCTC 13129, complete genomerecombinase A6e-32138
NC_009256:3056000:3056864305686430579341071Burkholderia vietnamiensis G4 chromosome 1, complete sequencerecombinase A8e-32138
NC_014932:985882:1011740101174010127831044Bartonella clarridgeiae 73, complete genomeRecA protein8e-32138
NC_011000:1023800:1041169104116910422121044Burkholderia cenocepacia J2315 chromosome 1, complete sequencerecombinase A8e-32138
NC_016787:1441350:1449668144966814507861119Corynebacterium diphtheriae HC03 chromosome, complete genomerecombinase A6e-32138
NC_016788:1445705:1453133145313314542511119Corynebacterium diphtheriae HC04 chromosome, complete genomerecombinase A6e-32138
NC_016802:1317365:1442889144288914440071119Corynebacterium diphtheriae HC02 chromosome, complete genomerecombinase A6e-32138
NC_016801:1422500:1499883149988315010011119Corynebacterium diphtheriae C7 (beta) chromosome, complete genomerecombinase A6e-32138
NC_016800:1477937:1486255148625514873731119Corynebacterium diphtheriae BH8 chromosome, complete genomerecombinase A6e-32138
NC_016799:1501578:1509896150989615110141119Corynebacterium diphtheriae 31A chromosome, complete genomerecombinase A6e-32138
NC_016790:1417421:1425739142573914268571119Corynebacterium diphtheriae VA01 chromosome, complete genomerecombinase A6e-32138
NC_016789:1495274:1503592150359215047101119Corynebacterium diphtheriae PW8 chromosome, complete genomerecombinase A6e-32138
NC_008781:4178115:4220381422038142215351155Polaromonas naphthalenivorans CJ2, complete genomerecA protein2e-31137
NC_013421:1173051:1200637120063712017101074Pectobacterium wasabiae WPP163, complete genomerecA protein2e-31137
NC_015722:209722:2185062185062195641059Candidatus Midichloria mitochondrii IricVA chromosome, completerecombinase A1e-31137
NC_010793:1075388:1080311108031110813811071Orientia tsutsugamushi str. Ikeda, complete genomeRecA protein1e-31137
NC_016781:1361704:1368201136820113693101110Corynebacterium pseudotuberculosis 3/99-5 chromosome, completerecombinase A1e-31137
NC_017031:1361687:1368185136818513692941110Corynebacterium pseudotuberculosis P54B96 chromosome, completerecombinase A1e-31137
NC_017300:1358260:1365765136576513668741110Corynebacterium pseudotuberculosis 1002 chromosome, completerecombinase A1e-31137
NC_017301:1360565:1368094136809413692031110Corynebacterium pseudotuberculosis C231 chromosome, completerecombinase A1e-31137
NC_017303:1361706:1368204136820413693131110Corynebacterium pseudotuberculosis I19 chromosome, complete genomerecombinase A1e-31137
NC_015733:1398083:1414688141468814157551068Pseudomonas putida S16 chromosome, complete genomerecombinase A9e-32137
NC_005955:947500:9476429476429486851044Bartonella quintana str. Toulouse, complete genomerecombinase A3e-31136
NC_015437:697051:7007507007507018351086Selenomonas sputigena ATCC 35185 chromosome, complete genomerecA protein2e-31136
NC_008261:2157713:2163448216344821645061059Clostridium perfringens ATCC 13124, complete genomerecA protein2e-31136
NC_008262:1835613:1837496183749618385541059Clostridium perfringens SM101, complete genomerecA protein2e-31136
NC_012880:1127997:1138027113802711391181092Dickeya dadantii Ech703, complete genomerecA protein5e-31135
NC_016913:83988:9446094460954911032Rickettsia rickettsii str. Brazil chromosome, complete genomerecombinase A4e-31135
NC_009439:442890:4490654490654501111047Pseudomonas mendocina ymp, complete genomerecA protein4e-31135
NC_021177:7815791:7819114781911478202171104Streptomyces fulvissimus DSM 40593, complete genomeProtein RecA 23e-31135
NC_010084:695817:7141677141677152401074Burkholderia multivorans ATCC 17616 chromosome 1, completerecombinase A3e-31135
NC_017042:1206000:1216681121668112177121032Rickettsia rhipicephali str. 3-7-female6-CWPP chromosome, completerecombinase A3e-31135
NC_010804:2808676:2809533280953328105791047Burkholderia multivorans ATCC 17616 chromosome 1, completerecombination protein3e-31135
NC_013592:3618248:3625645362564536267271083Dickeya dadantii Ech586, complete genomerecA protein1e-30134
NC_012563:2680246:2707139270713927082061068Clostridium botulinum A2 str. Kyoto, complete genomerecA protein1e-30134
NC_012658:2584355:2591099259109925921661068Clostridium botulinum Ba4 str. 657 chromosome, complete genomerecombinase A1e-30134
NC_009379:1910891:1913680191368019147711092Polynucleobacter sp. QLW-P1DMWA-1, complete genomerecA protein1e-30134
NC_015497:1287877:1289855128985512908861032Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomerecA protein1e-30134
NC_010520:2585014:2595380259538025964471068Clostridium botulinum A3 str. Loch Maree, complete genomerecA protein9e-31134
NC_010516:2511035:2520849252084925219161068Clostridium botulinum B1 str. Okra, complete genomerecA protein9e-31134
NC_008820:2027977:2028325202832520294641140Prochlorococcus marinus str. MIT 9303, complete genomeRecA bacterial DNA recombination protein9e-31134
NC_009831:1539159:1544274154427415453351062Shewanella sediminis HAW-EB3, complete genomeCalcium-transporting ATPase2e-30133
NC_009495:2524000:2532627253262725336851059Clostridium botulinum A str. ATCC 3502 chromosome, complete genomerecombinase A2e-30133
NC_009697:2394826:2404650240465024057081059Clostridium botulinum A str. ATCC 19397 chromosome, completerecombinase A2e-30133
NC_009698:2367171:2376995237699523780531059Clostridium botulinum A str. Hall chromosome, complete genomerecombinase A2e-30133
NC_009699:2576500:2581364258136425824221059Clostridium botulinum F str. Langeland chromosome, complete genomerecombinase A2e-30133
NC_017297:2575306:2581504258150425825621059Clostridium botulinum F str. 230613 chromosome, complete genomerecA protein2e-30133
NC_016050:1088223:1098501109850110995891089Rickettsia japonica YH, complete genomerecombinase A2e-30133
NC_016893:563890:5638905638905648911002Wigglesworthia glossinidia endosymbiont of Glossina morsitansDNA strand exchange/recombination protease/nuclease5e-30132
NC_014733:2201485:2203140220314022041741035Methylovorus sp. MP688 chromosome, complete genomereca protein5e-30132
NC_020300:960692:9606929606929617351044Bartonella australis Aust/NH1, complete genomerecombinase A3e-30132
NC_010694:2971170:2974685297468529757521068Erwinia tasmaniensis, complete genomeRecombinase A3e-30132
NC_013971:2876733:2880244288024428813111068Erwinia amylovora ATCC 49946 chromosome, complete genomerecombinase A3e-30132
NC_005042:1552074:1567932156793215690711140Prochlorococcus marinus subsp. marinus str. CCMP1375, completerecombinase A3e-30132
NC_007335:1053876:1069645106964510707781134Prochlorococcus marinus str. NATL2A, complete genomerecombinase A8e-30131
NC_008819:1635838:1650618165061816517511134Prochlorococcus marinus str. NATL1A, complete genomeRecA bacterial DNA recombination protein7e-30131
NC_007577:1517000:1541645154164515427421098Prochlorococcus marinus str. MIT 9312, complete genomerecA protein7e-30131
NC_008816:1476209:1501345150134515024421098Prochlorococcus marinus str. AS9601, complete genomeRecA bacterial DNA recombination protein7e-30131
NC_014328:1405484:1427327142732714284151089Clostridium ljungdahlii ATCC 49587 chromosome, complete genomerecombinase RecA6e-30131
NC_016818:749673:7677287677287687921065Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeprotein RecA1e-29130
NC_014246:1730000:1746489174648917476011113Mobiluncus curtisii ATCC 43063 chromosome, complete genomerecombination protein A2e-29130
NC_009952:1680682:1704693170469317057601068Dinoroseobacter shibae DFL 12, complete genomebacterial DNA recombination3e-29129
NC_008710:108057:1267631267631278541092Borrelia turicatae 91E135, complete genomeRecA protein6e-29128
NC_015277:689519:6965516965516975671017Sphingobacterium sp. 21 chromosome, complete genomeProtein recA2e-28127
NC_012438:132456:1425231425231435451023Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeprotein RecA1e-28127
NC_010546:4786000:4791407479140747924561050Cyanothece sp. ATCC 51142 chromosome circular, complete sequencerecombination protein1e-28127
NC_009921:8147947:8147947814794781489841038Frankia sp. EAN1pec, complete genomerecA protein9e-29127
NC_007947:577315:5949415949415959751035Methylobacillus flagellatus KT, complete genomerecA protein2e-28126
NC_011661:1175743:1181777118177711828471071Dictyoglomus turgidum DSM 6724, complete genomerecA protein6e-28125
NC_008346:1431051:1447035144703514480691035Syntrophomonas wolfei subsp. wolfei str. Goettingen, completehypothetical protein6e-28125
NC_011144:1073944:1092056109205610931411086Phenylobacterium zucineum HLK1, complete genomerecombinase A protein4e-28125
NC_010475:420978:4471994471994482451047Synechococcus sp. PCC 7002, complete genomerecA protein (recombinase A)4e-28125
NC_014109:27500:498574985750855999Candidatus Riesia pediculicola USDA chromosome, complete genomeprotein RecA4e-28125
NC_010184:3590895:3607354360735436083851032Bacillus weihenstephanensis KBAB4, complete genomerecA protein1e-27124
NC_011725:3785769:3795395379539537964261032Bacillus cereus B4264 chromosome, complete genomerecombinase A1e-27124
NC_014171:3661512:3674658367465836756891032Bacillus thuringiensis BMB171 chromosome, complete genomerecombinase A1e-27124
NC_012440:1874896:1880826188082618818421017Persephonella marina EX-H1, complete genomeprotein RecA1e-27124
NC_011772:3705878:3719029371902937200601032Bacillus cereus G9842, complete genomeprotein RecA1e-27124
NC_008600:3611038:3617419361741936184501032Bacillus thuringiensis str. Al Hakam, complete genomeRecA protein, group I intron-containing2e-27123
NC_012472:3625800:3635426363542636364571032Bacillus cereus 03BB102, complete genomeprotein RecA2e-27123
NC_014721:1028841:1038495103849510395651071Caldicellulosiruptor kristjanssonii 177R1B chromosome, completereca protein2e-27123
NC_014652:1758787:1769917176991717709871071Caldicellulosiruptor hydrothermalis 108 chromosome, completereca protein2e-27123
NC_013192:1765981:1788637178863717897491113Leptotrichia buccalis DSM 1135, complete genomerecA protein3e-27122
NC_015499:119200:1609911609911620221032Thermodesulfobium narugense DSM 14796 chromosome, complete genomeProtein recA3e-27122
NC_007644:280000:3023653023653033841020Moorella thermoacetica ATCC 39073, complete genomerecA protein3e-26119
NC_014166:2959688:2978880297888029799201041Arcobacter nitrofigilis DSM 7299 chromosome, complete genomerecombination protein RecA3e-25116
NC_018497:421248:4268714268714278931023Mycoplasma genitalium M6320 chromosome, complete genomerecombinase A7e-22105
NC_000908:421467:4270904270904281121023Mycoplasma genitalium G37, complete genomerecombinase A7e-22105
NC_005957:3602744:361266936126693613295627Bacillus thuringiensis serovar konkukian str. 97-27, completerecA protein (recombinase A), N-terminal region2e-1997.1
NC_014335:3531931:354184935418493542475627Bacillus cereus biovar anthracis str. CI chromosome, completeRecA protein, N-terminal region2e-1997.1
NC_012581:639329:646935646935647561627Bacillus anthracis str. CDC 684 chromosome, complete genomerecombinase A2e-1997.1
NC_012659:3579999:359102735910273591653627Bacillus anthracis str. A0248, complete genomeprotein RecA2e-1997.1
NC_017200:3622838:363276136327613633387627Bacillus thuringiensis serovar finitimus YBT-020 chromosome,RecA protein, N-terminal protein2e-1997.1
NC_016771:3520522:353155135315513532177627Bacillus cereus NC7401, complete genomerecombinase A2e-1996.7
NC_006274:3661194:367155236715523672178627Bacillus cereus E33L, complete genomerecA protein (recombinase A), N-terminal region2e-1996.7
NC_011773:3615998:362592236259223626548627Bacillus cereus AH820 chromosome, complete genomerecombinase A9e-1994.7
NC_018604:838932:8435638435638447531191Brachyspira pilosicoli WesB complete genomerecA protein1e-1894.4
NC_015434:1671532:1671532167153216736702139Verrucosispora maris AB-18-032 chromosome, complete genomerecA protein1e-1687.4
NC_011766:1106739:113669711366971137683987Desulfurococcus kamchatkensis 1221n chromosome, complete genomeDNA repair and recombination protein RadA3e-0756.2