Pre_GI: BLASTP Hits

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Query: CP002797:4656327:4669409 Escherichia coli NA114, complete genome

Start: 4669409, End: 4669588, Length: 180

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007613:4403070:441474344147434415345603Shigella boydii Sb227, complete genomeFimB3e-29127
NC_011751:5070597:508031650803165080918603Escherichia coli UMN026 chromosome, complete genometyrosine recombinase3e-29126
NC_013364:5255700:527110552711055271707603Escherichia coli O111:H- str. 11128, complete genometyrosine recombinase/inversion of on/off regulator of fimA4e-29126
NC_013008:5411285:542557454255745426176603Escherichia coli O157:H7 str. TW14359 chromosome, complete genometyrosine recombinase4e-29126
NC_011745:5114500:512723451272345127836603Escherichia coli ED1a chromosome, complete genometyrosine recombinase4e-29126
NC_011601:4856717:487958948795894880191603Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometyrosine recombinase4e-29126
NC_010498:4930649:494558149455814946183603Escherichia coli SMS-3-5, complete genometype 1 fimbriae regulatory protein FimB4e-29126
NC_008563:4905186:492192949219294922531603Escherichia coli APEC O1, complete genometype 1 fimbriae regulatory protein FimB4e-29126
NC_007946:4875997:490570049057004906302603Escherichia coli UTI89, complete genometype 1 fimbriae regulatory protein FimB4e-29126
NC_004431:5123325:513568951356895136291603Escherichia coli CFT073, complete genomeType 1 fimbriae Regulatory protein fimB4e-29126
NC_011750:4978000:498841149884114989013603Escherichia coli IAI39 chromosome, complete genometyrosine recombinase4e-29126
NC_008253:4817864:484619648461964846798603Escherichia coli 536, complete genometype 1 fimbriae regulatory protein FimB4e-29126
NC_000913:4528278:453898045389804539582603Escherichia coli K12, complete genometyrosine recombinase/inversion of on/off regulator of fimA3e-29126
CP002516:4199133:420886842088684209470603Escherichia coli KO11, complete genomeintegrase family protein3e-29126
NC_016902:4199133:420886842088684209470603Escherichia coli KO11FL chromosome, complete genomeintegrase family protein3e-29126
NC_013941:5219841:523413052341305234732603Escherichia coli O55:H7 str. CB9615 chromosome, complete genometype 1 fimbriae regulatory protein fimB3e-29126
NC_013361:5580741:558947355894735590075603Escherichia coli O26:H11 str. 11368 chromosome, complete genometyrosine recombinase3e-29126
NC_011742:4873351:488377648837764884378603Escherichia coli S88 chromosome, complete genometyrosine recombinase3e-29126
NC_011741:4570498:460160146016014602203603Escherichia coli IAI1 chromosome, complete genometyrosine recombinase3e-29126
NC_011353:5455224:546951354695135470115603Escherichia coli O157:H7 str. EC4115 chromosome, complete genometyrosine recombinase3e-29126
AC_000091:4534935:454563745456374546239603Escherichia coli W3110 DNA, complete genometyrosine recombinase/inversion of on/off regulator of fimA3e-29126
CU928160:4570498:460160146016014602203603Escherichia coli IAI1 chromosome, complete genometyrosine recombinase/inversion of on/off regulator of fimA3e-29126
NC_009800:4529504:454596045459604546562603Escherichia coli HS, complete genometype 1 fimbriae regulatory protein FimB3e-29126
NC_002695:5381576:539586553958655396467603Escherichia coli O157:H7 str. Sakai, complete genomeFimB3e-29126
CP002185:4791811:480340048034004804002603Escherichia coli W, complete genometyrosine recombinase/inversion of on/off regulator of FimA3e-29126
NC_011283:819970:827179827179827808630Klebsiella pneumoniae 342 chromosome, complete genometyrosine recombinase2e-25114
NC_016822:4889656:490369349036934904019327Shigella sonnei 53G, complete genometyrosine recombinase2e-21101
NC_020211:689451:689451689451690068618Serratia marcescens WW4, complete genometyrosine recombinase/inversion of on/off regulator of fimA3e-1890.5
NC_006511:2090058:210835021083502108916567Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCprobable DNA recombinase3e-1890.5
NC_011147:2085241:210353321035332104099567Salmonella enterica subsp. enterica serovar Paratyphi A strDNA recombinase3e-1890.5
NC_004631:2205821:222336022233602223926567Salmonella enterica subsp. enterica serovar Typhi Ty2, completeprobable DNA recombinase3e-1890.5
NC_010102:2322866:234189323418932342459567Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-1890.5
NC_003198:751779:757169757169757735567Salmonella enterica subsp. enterica serovar Typhi str. CT18,probable DNA recombinase3e-1890.5
NC_011080:780850:786239786239786805567Salmonella enterica subsp. enterica serovar Newport str. SL254,HbiF3e-1890.5
NC_003197:776238:781628781628782194567Salmonella typhimurium LT2, complete genomeputative phage integrase3e-1890.5
NC_011083:824659:830049830049830615567Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,HbiF3e-1890.5
NC_011094:842038:847428847428847994567Salmonella enterica subsp. enterica serovar Schwarzengrund strHbiF3e-1890.5
NC_016810:775649:781039781039781605567Salmonella enterica subsp. enterica serovar Typhimurium strputative type 1 fimbriae regulatory protein3e-1890.5
NC_016832:2201860:222012522201252220691567Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein3e-1890.5
NC_016856:776735:782125782125782691567Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative phage integrase3e-1890.5
NC_016857:775649:781039781039781605567Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74DNA recombinase3e-1890.5
NC_016860:816000:820458820458821024567Salmonella enterica subsp. enterica serovar Typhimurium strHbiF3e-1890.5
NC_016863:776734:782124782124782690567Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative phage integrase3e-1890.5
NC_017046:775636:781026781026781592567Salmonella enterica subsp. enterica serovar Typhimurium str. 798type 1 fimbriae regulatory protein3e-1890.5
NC_015963:117178:119778119778120362585Enterobacter asburiae LF7a plasmid pENTAS01, complete sequenceintegrase family protein5e-1889.7
NC_013508:3188978:320194032019403202479540Edwardsiella tarda EIB202, complete genomeprobable DNA recombinase7e-1889
NC_011283:819970:826107826107826715609Klebsiella pneumoniae 342 chromosome, complete genometyrosine recombinase5e-1786.3
NC_010498:2555706:256516025651602565789630Escherichia coli SMS-3-5, complete genometype 1 fimbriae regulatory protein5e-1786.3
NC_011750:2585015:259614225961422596771630Escherichia coli IAI39 chromosome, complete genomeType 1 fimbriae regulatory protein fimB5e-1786.3
NC_011415:351810:364008364008364571564Escherichia coli SE11 chromosome, complete genomeputative phage integrase5e-1786.3
NC_008253:334467:406588406588407151564Escherichia coli 536, complete genomeputative phage integrase6e-1786.3
NC_004431:364000:414420414420415022603Escherichia coli CFT073, complete genomeType 1 fimbriae Regulatory protein fimB9e-1785.5
NC_008563:318993:351484351484352086603Escherichia coli APEC O1, complete genomehypothetical protein9e-1785.5
NC_007946:289425:349892349892350494603Escherichia coli UTI89, complete genometype 1 fimbriae regulatory protein FimX9e-1785.5
AC_000091:4534935:454671745467174547313597Escherichia coli W3110 DNA, complete genometyrosine recombinase/inversion of on/off regulator of fimA2e-1684.7
NC_009800:4529504:454704045470404547636597Escherichia coli HS, complete genometype 1 fimbriae regulatory protein FimE2e-1684.7
NC_011750:4978000:498949149894914990087597Escherichia coli IAI39 chromosome, complete genometyrosine recombinase2e-1684.7
NC_004431:5123325:513676951367695137365597Escherichia coli CFT073, complete genomeType 1 fimbriae Regulatory protein fimE2e-1684.7
CP002516:4199133:420779442077944208390597Escherichia coli KO11, complete genomeintegrase family protein2e-1684.7
CP002185:4791811:480448048044804805076597Escherichia coli W, complete genometyrosine recombinase/inversion of on/off regulator of FimA2e-1684.7
NC_011751:5070597:508139650813965081992597Escherichia coli UMN026 chromosome, complete genometyrosine recombinase2e-1684.7
CU928160:4570498:460268146026814603277597Escherichia coli IAI1 chromosome, complete genometyrosine recombinase/inversion of on/off regulator of fimA2e-1684.7
NC_004337:4374500:438258543825854383181597Shigella flexneri 2a str. 301, complete genomerecombinase; regulator for fimA2e-1684.7
NC_013941:5219841:523521052352105235806597Escherichia coli O55:H7 str. CB9615 chromosome, complete genometype 1 fimbriae regulatory protein FimE2e-1684.7
NC_013008:5411285:542665454266545427250597Escherichia coli O157:H7 str. TW14359 chromosome, complete genometyrosine recombinase2e-1684.7
NC_011353:5455224:547059354705935471189597Escherichia coli O157:H7 str. EC4115 chromosome, complete genometyrosine recombinase2e-1684.7
NC_002695:5381576:539694553969455397541597Escherichia coli O157:H7 str. Sakai, complete genomeFimE2e-1684.7
NC_007613:4403070:441582344158234416419597Shigella boydii Sb227, complete genomeFimE2e-1684.7
NC_010498:4930649:494666149466614947257597Escherichia coli SMS-3-5, complete genometype 1 fimbriae regulatory protein FimE2e-1684.7
CP002797:4656327:467000546700054670601597Escherichia coli NA114, complete genomeTyrosine recombinase2e-1684.7
NC_004741:4364235:437368143736814374277597Shigella flexneri 2a str. 2457T, complete genomerecombinase; regulator for fimA2e-1684.7
NC_012759:4467288:447853644785364479141606Escherichia coli BW2952 chromosome, complete genometyrosine recombinase1e-1684.7
NC_011745:5114500:512831451283145128910597Escherichia coli ED1a chromosome, complete genometyrosine recombinase1e-1684.7
NC_008253:4817864:484727648472764847872597Escherichia coli 536, complete genometype 1 fimbriae regulatory protein FimE1e-1684.7
NC_007946:4875997:490678049067804907376597Escherichia coli UTI89, complete genometype 1 fimbriae regulatory protein FimE1e-1684.7
NC_008563:4905186:492300949230094923605597Escherichia coli APEC O1, complete genometype 1 fimbriae regulatory protein FimE1e-1684.7
NC_017328:4417000:442503044250304425626597Shigella flexneri 2002017 chromosome, complete genomeType 1 fimbriae regulatory protein fimE2e-1684.7
NC_016902:4199133:420779442077944208390597Escherichia coli KO11FL chromosome, complete genomeintegrase family protein2e-1684.7
NC_013364:5255700:527218552721855272781597Escherichia coli O111:H- str. 11128, complete genometyrosine recombinase/inversion of on/off regulator of fimA2e-1684.7
NC_013361:5580741:559055355905535591149597Escherichia coli O26:H11 str. 11368 chromosome, complete genometyrosine recombinase2e-1684.7
NC_012967:4510393:452295145229514523547597Escherichia coli B str. REL606 chromosome, complete genometyrosine recombinase2e-1684.7
NC_012947:3883484:389056138905613891157597Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completetyrosine recombinase2e-1684.7
NC_011742:4873351:488485548848554885451597Escherichia coli S88 chromosome, complete genometyrosine recombinase2e-1684.7
NC_011741:4570498:460268146026814603277597Escherichia coli IAI1 chromosome, complete genometyrosine recombinase2e-1684.7
NC_000913:4528278:454006045400604540656597Escherichia coli K12, complete genometyrosine recombinase/inversion of on/off regulator of fimA2e-1684.7
NC_010498:2555706:256653825665382567107570Escherichia coli SMS-3-5, complete genometype 1 fimbriae regulatory protein2e-1684.3
NC_011750:2585015:259752025975202598089570Escherichia coli IAI39 chromosome, complete genomeType 1 fimbriae regulatory protein fimB2e-1684.3
NC_004431:2747237:275810627581062758675570Escherichia coli CFT073, complete genomeType 1 fimbriae Regulatory protein fimB2e-1684.3
NC_008258:4345400:435325343532534353807555Shigella flexneri 5 str. 8401, complete genomeType 1 fimbriae Regulatory protein fimE2e-1684.3
NC_004431:2747237:275672927567292757358630Escherichia coli CFT073, complete genomeType 1 fimbriae Regulatory protein fimB3e-1684
NC_010694:3178842:319643831964383196998561Erwinia tasmaniensis, complete genomeType 1 fimbriae regulatory protein, FimB7e-1682.4
NC_012796:1600600:162005416200541620605552Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase2e-1581.3
NC_012962:820909:822971822971823546576Photorhabdus asymbiotica, complete genomerecombinase, type 1 fimbriae regulatory protein3e-1580.5
NC_012731:560199:587739587739588329591Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomerecombinase involved in phase variation8e-1579
NC_020211:689451:709057709057709677621Serratia marcescens WW4, complete genomehypothetical protein2e-1478.2
NC_020064:3790472:380848038084803809028549Serratia marcescens FGI94, complete genomesite-specific recombinase XerD2e-1477.8
NC_020064:3790472:379655937965593797110552Serratia marcescens FGI94, complete genomesite-specific recombinase XerD3e-1477.4
NC_009930:4909:133911339114008618Acaryochloris marina MBIC11017 plasmid pREB5, complete sequencephage integrase family protein3e-1270.5
NC_009927:253250:264976264976265548573Acaryochloris marina MBIC11017 plasmid pREB2, complete sequencephage integrase family protein5e-1269.7
NC_009930:4909:202612026120410150Acaryochloris marina MBIC11017 plasmid pREB5, complete sequencehypothetical protein8e-1269.3
NC_014394:2111985:211231021123102112963654Gallionella capsiferriformans ES-2 chromosome, complete genomeintegrase family protein1e-1065.5
NC_014394:1594071:160976616097661610419654Gallionella capsiferriformans ES-2 chromosome, complete genomeintegrase family protein1e-1065.5
NC_009925:6253059:627023562702356270450216Acaryochloris marina MBIC11017, complete genomehypothetical protein2e-0754.3
NC_014532:3596097:361037336103733610999627Halomonas elongata DSM 2581, complete genomeK07357 type 1 fimbriae regulatory protein FimB2e-0651.2