Pre_GI: OUP Neighbours

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Query: NC_012779:1449500 Edwardsiella ictaluri 93-146, complete genome

D: 41.6091

Host Lineage: Edwardsiella ictaluri; Edwardsiella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Edwardsiella ictaluri is the causative agent of enteric septicemia in catfish (ESC), an economically significant disease of farm-raised catfish. The acute form of ESC causes bacterial septicemia (proliferation of bacteria in the blood) which rapidly leads to death. The chronic form of this disease causes a characteristic head lesion, and may also proceed to septicemia and death. Two plasmids, which are consistently present in Edwardsiella ictaluri isolates, have been sequenced. Both plasmids contain genes for the type III secretory system, which is involved in translocating pathogenicity proteins into the eukaryotic cell.

Number of Neighbours: 96




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_014561:153143Pantoea vagans C9-1 plasmid pPag1, complete sequence78.6397 %Subject Query28.1767
NC_010465:429095Yersinia pseudotuberculosis YPIII, complete genome75.1869 %Subject Query29.1646
NC_005810:4469156Yersinia pestis biovar Microtus str. 91001, complete genome78.0392 %Subject Query29.5112
NC_003143:4006884Yersinia pestis CO92, complete genome75.913 %Subject Query29.6176
NC_008149:4053363Yersinia pestis Nepal516, complete genome77.8585 %Subject Query30.0006
NC_004088:266543Yersinia pestis KIM, complete genome77.9044 %Subject Query30.0081
NC_006155:4302826Yersinia pseudotuberculosis IP 32953, complete genome75.8517 %Subject Query30.1556
NC_015968:204969*Enterobacter asburiae LF7a chromosome, complete genome75.0092 %Subject Query30.2205
NC_010634:4234932Yersinia pseudotuberculosis PB1/+, complete genome75.9375 %Subject Query30.3016
NC_014562:1935088Pantoea vagans C9-1 chromosome, complete genome77.212 %Subject Query30.3988
NC_008149:1221637Yersinia pestis Nepal516, complete genome77.886 %Subject Query30.5812
NC_015968:4389871Enterobacter asburiae LF7a chromosome, complete genome75.6648 %Subject Query30.7332
NC_012912:2800884*Dickeya zeae Ech1591, complete genome75.4197 %Subject Query31.095
NC_003277:22257Salmonella typhimurium LT2 plasmid pSLT, complete sequence77.6348 %Subject Query31.1132
NC_006511:3759550Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC75.9926 %Subject Query31.1345
NC_008150:3529430Yersinia pestis Antiqua, complete genome76.7402 %Subject Query31.4433
NC_012962:3864000*Photorhabdus asymbiotica, complete genome75.0613 %Subject Query31.492
NC_015663:4447984Enterobacter aerogenes KCTC 2190 chromosome, complete genome76.0754 %Subject ←→ Query31.6444
NC_004631:3841975Salmonella enterica subsp. enterica serovar Typhi Ty2, complete75.2206 %Subject ←→ Query32.0647
NC_010102:3919999Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,75.3339 %Subject ←→ Query32.0708
NC_003197:3971905Salmonella typhimurium LT2, complete genome75.2206 %Subject ←→ Query32.0829
NC_014500:3519722Dickeya dadantii 3937 chromosome, complete genome76.78 %Subject ←→ Query32.164
NC_012779:916000Edwardsiella ictaluri 93-146, complete genome75.7047 %Subject ←→ Query32.2167
NC_012912:1229333Dickeya zeae Ech1591, complete genome75.1409 %Subject ←→ Query32.2592
NC_007712:1893066*Sodalis glossinidius str. 'morsitans', complete genome79.905 %Subject ←→ Query32.276
NC_012912:325913Dickeya zeae Ech1591, complete genome75.3493 %Subject ←→ Query32.3565
NC_011083:3985618Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,75.5729 %Subject ←→ Query32.4599
NC_013421:1954915*Pectobacterium wasabiae WPP163, complete genome75.6587 %Subject ←→ Query32.6483
NC_013592:3397304Dickeya dadantii Ech586, complete genome76.0325 %Subject ←→ Query32.6808
NC_013508:1262333Edwardsiella tarda EIB202, complete genome78.9216 %Subject ←→ Query32.8692
NC_010634:1565788Yersinia pseudotuberculosis PB1/+, complete genome77.1078 %Subject ←→ Query33.0113
NC_006155:1567306Yersinia pseudotuberculosis IP 32953, complete genome77.3101 %Subject ←→ Query33.2342
NC_012880:3645304Dickeya dadantii Ech703, complete genome77.3989 %Subject ←→ Query33.3293
NC_012779:1820244*Edwardsiella ictaluri 93-146, complete genome75.3431 %Subject ←→ Query33.3621
NC_013716:1756545*Citrobacter rodentium ICC168, complete genome75.1593 %Subject ←→ Query33.4286
NC_004088:3955933Yersinia pestis KIM, complete genome77.2273 %Subject ←→ Query33.4603
NC_012779:3652737Edwardsiella ictaluri 93-146, complete genome76.8137 %Subject ←→ Query33.7001
NC_012779:2664849Edwardsiella ictaluri 93-146, complete genome76.2102 %Subject ←→ Query33.7832
NC_012912:777592*Dickeya zeae Ech1591, complete genome75.5484 %Subject ←→ Query33.9737
NC_010159:1101241Yersinia pestis Angola, complete genome77.2365 %Subject ←→ Query33.9894
NC_005810:3238391Yersinia pestis biovar Microtus str. 91001, complete genome76.9884 %Subject ←→ Query34.2139
NC_003143:645559Yersinia pestis CO92, complete genome77.0588 %Subject ←→ Query34.4007
NC_013508:3593000Edwardsiella tarda EIB202, complete genome79.0441 %Subject ←→ Query34.4706
NC_012779:1939747Edwardsiella ictaluri 93-146, complete genome77.163 %Subject ←→ Query34.6849
NC_012779:3316877Edwardsiella ictaluri 93-146, complete genome79.5558 %Subject ←→ Query34.9445
NC_009792:808332Citrobacter koseri ATCC BAA-895, complete genome76.8137 %Subject ←→ Query35.0274
NC_010694:3055403Erwinia tasmaniensis, complete genome77.9105 %Subject ←→ Query35.0644
NC_014562:1402863Pantoea vagans C9-1 chromosome, complete genome75.7138 %Subject ←→ Query35.29
NC_003198:3824187Salmonella enterica subsp. enterica serovar Typhi str. CT18,75.6189 %Subject ←→ Query35.4207
NC_010694:614985Erwinia tasmaniensis, complete genome78.8634 %Subject ←→ Query35.5876
NC_010067:3753971Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete75.7782 %Subject ←→ Query35.7065
NC_006905:3942753Salmonella enterica subsp. enterica serovar Choleraesuis str76.4491 %Subject ←→ Query35.749
NC_010067:632683Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete77.6317 %Subject ←→ Query35.8098
NC_009832:1946401Serratia proteamaculans 568, complete genome75.2267 %Subject ←→ Query35.908
NC_012779:2424967*Edwardsiella ictaluri 93-146, complete genome79.1728 %Subject ←→ Query35.992
NC_004631:3809678Salmonella enterica subsp. enterica serovar Typhi Ty2, complete75.5515 %Subject ←→ Query36.1376
NC_013961:3083816Erwinia amylovora, complete genome76.9884 %Subject ←→ Query36.2172
NC_003197:4005857Salmonella typhimurium LT2, complete genome75.098 %Subject ←→ Query36.3904
NC_007712:2287053Sodalis glossinidius str. 'morsitans', complete genome76.5594 %Subject ←→ Query36.533
NC_012880:2778795Dickeya dadantii Ech703, complete genome75.8425 %Subject ←→ Query36.5333
NC_012779:2064582Edwardsiella ictaluri 93-146, complete genome82.6593 %Subject ←→ Query37.0151
NC_008150:1420825*Yersinia pestis Antiqua, complete genome75.9252 %Subject ←→ Query37.0184
NC_005810:1794490*Yersinia pestis biovar Microtus str. 91001, complete genome76.0233 %Subject ←→ Query37.035
NC_007712:433500Sodalis glossinidius str. 'morsitans', complete genome80.5576 %Subject ←→ Query37.0845
NC_003143:2137945*Yersinia pestis CO92, complete genome75.6985 %Subject ←→ Query37.3318
NC_010694:2189652*Erwinia tasmaniensis, complete genome75.6556 %Subject ←→ Query37.4179
NC_011083:4020000Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,75.2727 %Subject ←→ Query37.6885
NC_014500:894136Dickeya dadantii 3937 chromosome, complete genome76.3909 %Subject ←→ Query37.8586
NC_012779:261438*Edwardsiella ictaluri 93-146, complete genome77.886 %Subject ←→ Query37.9045
NC_011149:2040396Salmonella enterica subsp. enterica serovar Agona str. SL483,78.6458 %Subject ←→ Query37.9381
NC_014500:1646854*Dickeya dadantii 3937 chromosome, complete genome76.0172 %Subject ←→ Query37.9513
NC_005126:1265071Photorhabdus luminescens subsp. laumondii TTO1, complete genome77.6838 %Subject ←→ Query37.9976
NC_015942:63440*Acidithiobacillus ferrivorans SS3 chromosome, complete genome75.4718 %Subject ←→ Query38.0588
NC_012779:957558Edwardsiella ictaluri 93-146, complete genome77.546 %Subject ←→ Query38.2879
NC_013282:1256769Cronobacter turicensis, complete genome77.2365 %Subject ←→ Query38.8742
NC_014228:2883500Xenorhabdus nematophila ATCC 19061, complete genome76.4522 %Subject ←→ Query39.0811
NC_014228:3022903Xenorhabdus nematophila ATCC 19061, complete genome75.2022 %Subject ←→ Query39.1304
NC_013508:1687432Edwardsiella tarda EIB202, complete genome76.5564 %Subject ←→ Query39.3906
NC_012779:3176820*Edwardsiella ictaluri 93-146, complete genome80.4596 %Subject ←→ Query39.7546
NC_012779:996879Edwardsiella ictaluri 93-146, complete genome76.97 %Subject ←→ Query39.7678
NC_012779:305969Edwardsiella ictaluri 93-146, complete genome78.5601 %Subject ←→ Query39.836
NC_012779:2281700*Edwardsiella ictaluri 93-146, complete genome81.2714 %Subject ←→ Query40.1776
NC_012779:2856051Edwardsiella ictaluri 93-146, complete genome82.0956 %Subject ←→ Query40.677
NC_014228:3282500Xenorhabdus nematophila ATCC 19061, complete genome78.7439 %Subject ←→ Query41.4806
NC_012779:2928000*Edwardsiella ictaluri 93-146, complete genome77.5368 %Subject ←→ Query41.5453
NC_013508:876431*Edwardsiella tarda EIB202, complete genome77.0956 %Subject ←→ Query41.7282
NC_013508:2130681*Edwardsiella tarda EIB202, complete genome79.0288 %Subject ←→ Query42.2435
NC_009648:293052*Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome78.4712 %Subject ←→ Query43.5401
NC_013508:2356865*Edwardsiella tarda EIB202, complete genome76.7831 %Subject ←→ Query44.5077
NC_013508:1289159*Edwardsiella tarda EIB202, complete genome75.769 %Subject ←→ Query44.7971
NC_008343:1548020*Granulibacter bethesdensis CGDNIH1, complete genome75.2727 %Subject ←→ Query44.918
NC_012779:1286500Edwardsiella ictaluri 93-146, complete genome76.4645 %Subject ←→ Query45.1799
NC_012779:2586175Edwardsiella ictaluri 93-146, complete genome77.0588 %Subject ←→ Query45.323
NC_012779:2957000Edwardsiella ictaluri 93-146, complete genome78.9032 %Subject ←→ Query46.4521
NC_009648:1487692Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome79.5435 %Subject ←→ Query49.6231
NC_009648:2465613*Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome79.5343 %Subject ←→ Query50.7802