Pre_GI Gene

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Host: NC_003197 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003197:4005857 Salmonella typhimurium LT2, complete genome

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
40058574006387531putative cytoplasmic proteinQuickGO ontologyBLASTP
40063844006746363putative inner membrane proteinQuickGO ontologyBLASTP
40067364007083348putative inner membrane proteinQuickGO ontologyBLASTP
400752740091881662hypothetical proteinBLASTP
40093784009812435small heat shock proteinQuickGO ontologyBLASTP
40099164010335420small heat shock proteinQuickGO ontologyBLASTP
40106364010971336putative outer membrane lipoproteinQuickGO ontologyBLASTP
401097340121991227putative cytoplasmic proteinQuickGO ontologyBLASTP
401232140133641044putative heme lyase subunitQuickGO ontologyBLASTP
40133614013918558heme lyase disulfide oxidoreductaseQuickGO ontologyBLASTP
401391540158461932cytochrome c-type biogenesis proteinQuickGO ontologyBLASTP
40158434016322480periplasmic heme-dependent peroxidaseQuickGO ontologyBLASTP
40163194016531213heme exporter protein CQuickGO ontologyBLASTP
40165284017265738heme exporter proteinQuickGO ontologyBLASTP
40173174017976660heme exporter proteinQuickGO ontologyBLASTP
40179734018590618heme exporter proteinQuickGO ontologyBLASTP
401859640199961401putative cytochrome c peroxidaseQuickGO ontologyBLASTP
40201864020818633chaperone protein TorDQuickGO ontologyBLASTP
402081140233632553trimethylamine N-oxide reductase subunitQuickGO ontologyBLASTP
402335340245371185trimethylamine N-oxide reductase cytochrome c-like subunitQuickGO ontologyBLASTP
40246674025359693response regulatorQuickGO ontologyBLASTP
402533240263721041periplasmic sensorQuickGO ontologyBLASTP
402645240291872736sensor kinaseQuickGO ontologyBLASTP