Pre_GI: BLASTP Hits

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Query: NC_012808:1979000:1989426 Methylobacterium extorquens AM1, complete genome

Start: 1989426, End: 1990091, Length: 666

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011894:3578500:357959235795923580242651Methylobacterium nodulans ORS 2060, complete genomecobyrinic acid ac-diamide synthase6e-22103
NC_010511:3674178:372664037266403727275636Methylobacterium sp. 4-46 chromosome, complete genomecobyrinic acid ac-diamide synthase8e-22103
NC_011365:2996488:299648829964882997141654Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeCobyrinic acid ac-diamide synthase1e-20100
NC_005296:4574213:461630746163074616981675Rhodopseudomonas palustris CGA009, complete genomeATPase, ParA type6e-2097.4
NC_010514:6000:133121331213956645Methylobacterium radiotolerans JCM 2831 plasmid pMRAD03, completeCobyrinic acid ac-diamide synthase1e-1893.2
NC_015221:12389:217952179522427633Nitrosomonas sp. AL212 plasmid pNAL21202, complete sequencecobyrinic acid ac-diamide synthase3e-1892
NC_017059:2957911:297497729749772975606630Rhodospirillum photometricum DSM 122, complete genomeATPase involved in chromosome partitioning,putative2e-1686.3
NC_009445:6621996:666380366638036664465663Bradyrhizobium sp. ORS 278 chromosome, complete genomepartition protein (ParA)3e-1685.1
NC_015844:3159046:316873531687353169319585Zobellia galactanivorans, complete genomeconjugative transposon protein TraA2e-1582
NC_007650:2901751:290851329085132909175663Burkholderia thailandensis E264 chromosome II, complete sequenceParA family protein7e-1580.5
NC_007509:1383013:138986513898651390560696Burkholderia sp. 383 chromosome 3, complete sequenceCobyrinic acid a,c-diamide synthase2e-1479.3
NC_016511:1354949:136454513645451365129585Propionibacterium acnes TypeIA2 P.acn31 chromosome, completeplasmid partition protein ParA2e-1479.3
NC_015853:1:108241082411453630Acidithiobacillus caldus SM-1 plasmid pLAtc2, complete sequencepartition protein A2e-1479
NC_008784:1151305:115908611590861159748663Burkholderia mallei SAVP1 chromosome I, complete sequenceParA family protein3e-1478.6
NC_007435:1825741:183284218328421833504663Burkholderia pseudomallei 1710b chromosome II, complete sequenceParA family protein3e-1478.6
NC_009078:3087759:309454930945493095211663Burkholderia pseudomallei 1106a chromosome II, complete sequenceCobQ/CobB/MinD/ParA nucleotide-binding domain protein3e-1478.6
NC_009075:3113393:312121131212113121873663Burkholderia pseudomallei 668 chromosome II, complete sequenceParA family protein3e-1478.6
NC_008835:1483237:148862414886241489286663Burkholderia mallei NCTC 10229 chromosome I, complete sequenceParA family protein3e-1478.6
NC_006349:2311817:231867423186742319336663Burkholderia mallei ATCC 23344 chromosome 2, complete sequenceParA family protein3e-1478.6
NC_006351:3159630:316674431667443167406663Burkholderia pseudomallei K96243 chromosome 2, complete sequencepartition protein ParA3e-1478.6
NC_009079:2339756:234600223460022346664663Burkholderia mallei NCTC 10247 chromosome I, complete sequenceCobQ/CobB/MinD/ParA nucleotide-binding domain protein3e-1478.6
NC_016512:1357225:136399013639901364574585Propionibacterium acnes TypeIA2 P.acn17 chromosome, completeplasmid partition protein ParA3e-1478.6
NC_010557:274945:283905283905284600696Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceCobyrinic acid ac-diamide synthase3e-1478.6
NC_008392:542000:553230553230553925696Burkholderia cepacia AMMD chromosome 3, complete sequenceCobyrinic acid a,c-diamide synthase3e-1478.6
NC_009254:23000:292242922429919696Burkholderia vietnamiensis G4 chromosome 3, complete sequencecobyrinic acid a,c-diamide synthase3e-1478.6
NC_016516:1345840:135543513554351356019585Propionibacterium acnes TypeIA2 P.acn33 chromosome, completeplasmid partition protein ParA4e-1478.2
NC_010512:734834:740950740950741645696Burkholderia cenocepacia MC0-3 chromosome 3, complete sequenceCobyrinic acid ac-diamide synthase5e-1477.8
NC_008062:370902:377091377091377786696Burkholderia cenocepacia AU 1054 chromosome 3, complete sequenceCobyrinic acid a,c-diamide synthase5e-1477.8
NC_008544:348500:354911354911355606696Burkholderia cenocepacia HI2424 chromosome 3, complete sequenceCobyrinic acid a,c-diamide synthase5e-1477.8
NC_006085:1379370:138896613889661389631666Propionibacterium acnes KPA171202, complete genomeplasmid partition protein ParA2e-1376.3
NC_012720:114489:100100789690Burkholderia glumae BGR1 plasmid bglu_3p, complete sequenceParA family protein2e-1375.9
NC_019012:61360:676806768068285606Fibrella aestuarina BUZ 2 plasmid pFAES01, complete sequencechromosome partitioning protein2e-1272.8
NC_010682:1593108:160025316002531600951699Ralstonia pickettii 12J chromosome 1, complete sequenceCobyrinic acid ac-diamide synthase2e-1272.8
NC_014506:157396:157396157396158049654Sulfurimonas autotrophica DSM 16294 chromosome, complete genomeplasmid partitioning protein2e-1272.8
NC_014550:3377834:340415434041543404747594Arthrobacter arilaitensis Re117, complete genomeParA family protein4e-1271.6
NC_010170:4800000:482228048222804823236957Bordetella petrii, complete genomeputative partition protein5e-1271.2
NC_007643:1781723:179601217960121796650639Rhodospirillum rubrum ATCC 11170, complete genomeCobyrinic acid a,c-diamide synthase5e-1271.2
NC_009668:445134:511677511677512330654Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequencecobyrinic acid ac-diamide synthase1e-1170.1
NC_017249:18493:441224412244760639Bradyrhizobium japonicum USDA 6, complete genomepartition protein2e-1169.7
NC_004463:18497:441304413044768639Bradyrhizobium japonicum USDA 110, complete genomeputative partition protein2e-1169.7
NC_009930:4909:121201212012761642Acaryochloris marina MBIC11017 plasmid pREB5, complete sequenceParA protein, putative2e-1168.9
NC_008344:811386:830575830575831204630Nitrosomonas eutropha C91, complete genomeCobyrinic acid a,c-diamide synthase3e-1168.6
NC_009720:622262:653829653829654482654Xanthobacter autotrophicus Py2, complete genomecobyrinic acid ac-diamide synthase3e-1168.6
NC_014840:205723:215231215231215851621Pantoea sp. At-9b plasmid pPAT9B03, complete sequenceCobyrinic acid ac-diamide synthase4e-1168.2
NC_009720:4406991:444263144426314443284654Xanthobacter autotrophicus Py2, complete genomecobyrinic acid ac-diamide synthase5e-1168.2
NC_016835:128757:142563142563143189627Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq201,chromosome partitioning ATPase5e-1167.8
NC_009927:253250:266190266190266798609Acaryochloris marina MBIC11017 plasmid pREB2, complete sequencechromosome partitioning protein, ParA family, putative9e-1167
NC_014305:97055:109690109690110310621Erwinia billingiae Eb661 plasmid pEB170, complete sequencePlasmid partitioning protein F1e-1066.6
NC_005230:32647:381313813138712582Synechocystis sp. PCC 6803 plasmid pSYSA, complete sequencehypothetical protein2e-1065.9
NC_013862:27991:7979714636Allochromatium vinosum DSM 180 plasmid pALVIN02, complete sequenceCobyrinic acid ac-diamide synthase1e-0963.2
NC_012988:2455807:249229024922902492991702Methylobacterium extorquens DM4, complete genomepartitioning protein, ATPase2e-0962.8
NC_015160:2002570:202775320277532028511759Odoribacter splanchnicus DSM 20712 chromosome, complete genomechromosome-partitioning ATPase2e-0962.4
NC_010322:4623867:466762346676234668270648Pseudomonas putida GB-1 chromosome, complete genomecobyrinic acid ac-diamide synthase3e-0962
NC_016113:994469:101220710122071012923717Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequenceplasmid partitioning protein9e-0960.5
NC_008260:2340824:235884723588472359614768Alcanivorax borkumensis SK2, complete genomeParA family protein9e-0960.5
NC_014910:242845:264014264014264652639Alicycliphilus denitrificans BC chromosome, complete genomecobyrinic acid ac-diamide synthase1e-0860.1
NC_008752:725189:747663747663748301639Acidovorax avenae subsp. citrulli AAC00-1, complete genomeCobyrinic acid a,c-diamide synthase1e-0860.1
NC_008538:46469:505885058851220633Arthrobacter sp. FB24 plasmid 2, complete sequenceCobyrinic acid a,c-diamide synthase2e-0859.3
NC_015147:9761:243062430624938633Arthrobacter phenanthrenivorans Sphe3 plasmid pASPHE302, completeplasmid segregation oscillating ATPase ParF4e-0858.5
NC_008577:1455000:147866614786661479304639Shewanella sp. ANA-3 chromosome 1, complete sequenceCobyrinic acid a,c-diamide synthase4e-0858.5
NC_014642:236896:245102245102245851750Achromobacter xylosoxidans A8 plasmid pA82, complete sequencecobyrinic acid a,c-diamide synthase4e-0858.5
NC_003295:2787371:280827628082762808914639Ralstonia solanacearum GMI1000, complete genomePUTATIVE PARTITION PROTEIN3e-0858.5
NC_015977:3011177:302197030219703022788819Roseburia hominis A2-183 chromosome, complete genomechromosome partitioning ATPase4e-0858.2
NC_008319:962968:100887710088771009569693Synechococcus sp. CC9311, complete genomeParA family chromosome partitioning protein6e-0857.8
NC_008758:12000:341703417034868699Polaromonas naphthalenivorans CJ2 plasmid pPNAP02, completeCobyrinic acid a,c-diamide synthase5e-0857.8
NC_015381:2859000:289466928946692895307639Burkholderia gladioli BSR3 chromosome 1, complete sequencecobyrinic Acid a,c-diamide synthase5e-0857.8
NC_016147:1961000:198868219886821989320639Pseudoxanthomonas spadix BD-a59 chromosome, complete genomecobyrinic acid a,c-diamide synthase7e-0857.4
NC_010943:3069082:311255531125553113151597Stenotrophomonas maltophilia K279a, complete genomeputative plasmid partitioning like protein7e-0857.4
NC_018691:3041851:306362230636223064260639Alcanivorax dieselolei B5 chromosome, complete genomePlasmid segregation oscillating ATPase ParF1e-0756.6
NC_015556:2265940:228756922875692288207639Pseudomonas fulva 12-X chromosome, complete genomeCobyrinic acid ac-diamide synthase1e-0756.6
NC_010943:1332243:134940913494091350047639Stenotrophomonas maltophilia K279a, complete genomeputative ParA/CobQ/CobB/MinD nucleotide binding domain protein3e-0755.5
NC_005140:960261:966338966338966979642Vibrio vulnificus YJ016 chromosome II, complete sequencehypothetical protein4e-0755.1
NC_011365:1135750:116314511631451163975831Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeCobyrinic acid ac-diamide synthase4e-0755.1
NC_008044:3024125:303649930364993037311813Silicibacter sp. TM1040, complete genomeCobyrinic acid a,c-diamide synthase3e-0755.1
NC_007005:1738500:174882817488281749769942Pseudomonas syringae pv. syringae B728a, complete genomeCobyrinic acid a,c-diamide synthase5e-0754.7
NC_015677:2939301:296296429629642963806843Ramlibacter tataouinensis TTB310 chromosome, complete genomechromosome partitioning protein5e-0754.3
NC_015382:266000:100100753654Burkholderia gladioli BSR3 plasmid bgla_1p, complete sequenceChromosome partition protein ParA8e-0753.9
NC_017371:1470582:149017814901781490846669Helicobacter pylori Gambia94/24 chromosome, complete genomehypothetical protein8e-0753.9
NC_014560:1366747:139539413953941396062669Helicobacter pylori SJM180 chromosome, complete genomehypothetical protein8e-0753.9
NC_014256:485969:505645505645506313669Helicobacter pylori B8 chromosome, complete genomehypothetical protein7e-0753.9
NC_017063:834674:868078868078868746669Helicobacter pylori ELS37 chromosome, complete genomehypothetical protein7e-0753.9
NC_020409:621792:658299658299658862564Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeputative Chromosome partitioning ATPase-like protein1e-0653.5
NC_014393:2771774:278149027814902782269780Clostridium cellulovorans 743B chromosome, complete genomesporulation initiation inhibitor soj family protein2e-0652.8
NC_013729:5497814:5518180551818055192471068Kribbella flavida DSM 17836, complete genomeCobyrinic acid ac-diamide synthase2e-0652.8
NC_015693:53196:627716277163715945Runella slithyformis DSM 19594 plasmid pRUNSL01, complete sequenceCobyrinic acid ac-diamide synthase2e-0652.8
NC_009350:137645:150244150244151139896Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete2e-0652.4
NC_012560:3667177:366717736671773667815639Azotobacter vinelandii DJ, complete genomeATPase, ParA type2e-0652.4
NC_021150:3667176:366717636671763667814639Azotobacter vinelandii CA6, complete genomeATPase, ParA type2e-0652.4
NC_009439:3770282:379108337910833791721639Pseudomonas mendocina ymp, complete genomecobyrinic acid a,c-diamide synthase2e-0652.4
NC_016783:1169821:118367511836751184544870Corynebacterium diphtheriae INCA 402 chromosome, complete genomeputative regulatory protein3e-0652
NC_010815:40357:403574035741007651Geobacter lovleyi SZ plasmid pGLOV01, complete sequenceCobyrinic acid ac-diamide synthase3e-0652
NC_013204:1135397:114124411412441142011768Eggerthella lenta DSM 2243, complete genomeCobyrinic acid ac-diamide synthase3e-0652
NC_013169:1545890:156208715620871563031945Kytococcus sedentarius DSM 20547, complete genomeATPase involved in chromosome partitioning3e-0652
NC_014391:2579919:257991925799192580842924Micromonospora aurantiaca ATCC 27029 chromosome, complete genomecobyrinic acid ac-diamide synthase4e-0651.6
NC_017375:77142:899468994690623678Helicobacter pylori 83 chromosome, complete genomePARA protein4e-0651.6
NC_017362:1512959:153600315360031536671669Helicobacter pylori Lithuania75 chromosome, complete genomehypothetical protein4e-0651.6
NC_017378:1518529:153698015369801537648669Helicobacter pylori Puno120 chromosome, complete genomehypothetical protein6e-0651.2
NC_007777:3231649:323940132394013240342942Frankia sp. CcI3, complete genomeCobyrinic acid a,c-diamide synthase5e-0651.2
NC_017366:1055319:107175710717571072407651Helicobacter pylori F32, complete genomePARA protein5e-0651.2
NC_017372:748097:768038768038768688651Helicobacter pylori India7 chromosome, complete genomehypothetical protein5e-0651.2
NC_012471:1197534:127118412711841271960777Streptococcus equi subsp. equi 4047, complete genomesporulation initiation inhibitor Soj homolog5e-0651.2
NC_018606:40000:439174391744681765Cardinium endosymbiont cPer1 of Encarsia pergandiella plasmidChromosome partitioning protein ParA5e-0651.2
NC_015057:268000:286455286455287168714Acidobacterium sp. MP5ACTX9 plasmid pACIX901, complete sequencechromosome partitioning ATPase5e-0651.2
NC_013193:38918:476114761148318708Candidatus Accumulibacter phosphatis clade IIA str. UW-1 plasmidhypothetical protein8e-0650.4