Pre_GI: BLASTP Hits

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Query: NC_009792:4658909:4658909 Citrobacter koseri ATCC BAA-895, complete genome

Start: 4658909, End: 4659595, Length: 687

Host Lineage: Citrobacter koseri; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter koseri ATCC BAA-895 is a clinical isolate from a human infant. Causative agent of neonatal meningitis. Citrobacter koseri, previously known as Citrobacter diversus, Levinea diversus or Levinea malonatica resides in a wide range of environments, including soil, water and food products. It is an occasional inhabitant of human and animal intestines, but is mainly characterized as being a causative agent of neonatal meningitis with an extreme high rate of multiple brain abscess initiations and a concomitant high moratility rate. The bacteria are used in neonatal rat models to study the mechanism of blood-brain barrier penetration, host immune response evasion and its resistance to phagocytotic killing.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016822:4093000:410163841016384102330693Shigella sonnei 53G, complete genomelipopolysaccharide core biosynthesis protein1e-1790.1
NC_009800:3821824:383199338319933832685693Escherichia coli HS, complete genomelipopolysaccharide core biosynthesis protein RfaY1e-1789.7
NC_007606:3784847:379468137946813795373693Shigella dysenteriae Sd197, complete genomeLipopolysaccharide core biosynthesis protein rfaY2e-1789.4
CU928160:3862935:387310438731043873796693Escherichia coli IAI1 chromosome, complete genomelipopolysaccharide core biosynthesis protein2e-1789.4
NC_011741:3862935:387310438731043873796693Escherichia coli IAI1 chromosome, complete genomelipopolysaccharide core biosynthesis protein2e-1789.4
NC_007384:3956465:396477839647783965470693Shigella sonnei Ss046, complete genomelipopolysaccharide core biosynthesis2e-1789.4
NC_010468:80000:886718867189363693Escherichia coli ATCC 8739, complete genomelipopolysaccharide core biosynthesis protein2e-1789.4
CP002516:88500:971009710097792693Escherichia coli KO11, complete genomelipopolysaccharide core biosynthesis protein3e-1789
NC_009801:4108179:411834841183484119040693Escherichia coli E24377A, complete genomelipopolysaccharide core biosynthesis protein RfaY3e-1789
CP002185:3998112:400828140082814008973693Escherichia coli W, complete genomelipopolysaccharide core biosynthesis protein3e-1789
NC_016902:88500:971009710097792693Escherichia coli KO11FL chromosome, complete genomelipopolysaccharide core biosynthesis protein3e-1789
NC_020063:97436:105744105744106442699Enterobacteriaceae bacterium strain FGI 57, complete genomeMn2+-dependent serine/threonine protein kinase3e-1789
NC_012947:94930:103754103754104446693Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completelipopolysaccharide core biosynthesis protein2e-1789
NC_011750:4307166:431733243173324318024693Escherichia coli IAI39 chromosome, complete genomelipopolysaccharide core biosynthesis protein2e-1789
NC_004431:4223232:423341042334104234102693Escherichia coli CFT073, complete genomeLipopolysaccharide core biosynthesis protein rfaY2e-1789
NC_008563:4083558:409373640937364094428693Escherichia coli APEC O1, complete genomelipopolysaccharide core biosynthesis protein RfaY2e-1789
NC_008253:3896704:390688239068823907574693Escherichia coli 536, complete genomelipopolysaccharide core biosynthesis protein WaaY2e-1789
NC_007946:4050762:406094040609404061632693Escherichia coli UTI89, complete genomelipopolysaccharide core biosynthesis protein rfaY2e-1789
NC_011742:3998285:400846340084634009155693Escherichia coli S88 chromosome, complete genomelipopolysaccharide core biosynthesis protein2e-1789
NC_007613:3637832:364801036480103648702693Shigella boydii Sb227, complete genomeWaaY2e-1789
NC_010498:4031500:404043340404334041125693Escherichia coli SMS-3-5, complete genomelipopolysaccharide core biosynthesis protein RfaY4e-1788.2
NC_011740:4007000:401578940157894016487699Escherichia fergusonii ATCC 35469, complete genomelipopolysaccharide core biosynthesis protein4e-1788.2
NC_010658:3774110:378523437852343785926693Shigella boydii CDC 3083-94, complete genomelipopolysaccharide core biosynthesis protein RfaY1e-1686.7
NC_012759:3675396:368661636866163687314699Escherichia coli BW2952 chromosome, complete genomelipopolysaccharide core biosynthesis protein3e-1685.5
NC_010473:3883701:389586738958673896565699Escherichia coli str. K-12 substr. DH10B, complete genomelipopolysaccharide core biosynthesis protein3e-1685.5
NC_000913:3786124:379829037982903798988699Escherichia coli K12, complete genomelipopolysaccharide core biosynthesis protein3e-1685.5
AC_000091:3827856:383945038394503840148699Escherichia coli W3110 DNA, complete genomelipopolysaccharide core biosynthesis protein3e-1685.5
NC_011601:4036590:404664140466414047339699Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomelipopolysaccharide core biosynthesis protein4e-1684.7
NC_015761:3611993:362086736208673621565699Salmonella bongori NCTC 12419, complete genomelipopolysaccharide core biosynthesis protein5e-1684.7
NC_012967:3729813:373999137399913740539549Escherichia coli B str. REL606 chromosome, complete genomelipopolysaccharide core biosynthesis protein1e-1480.1
NC_013716:4408201:441989844198984420596699Citrobacter rodentium ICC168, complete genomelipopolysaccharide core biosynthesis protein1e-1480.1
NC_010067:3846962:385742738574273858125699Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-1479
NC_016857:3924000:393308139330813933779699Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74lipopolysaccharide core biosynthesis protein6e-1477.8
NC_016856:3916500:392545839254583926156699Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Slipopolysaccharide core biosynthesis protein6e-1477.8
NC_011147:3686500:369538736953873696085699Salmonella enterica subsp. enterica serovar Paratyphi A strlipopolysaccharide core biosynthesis protein6e-1477.8
NC_006511:3690828:369971036997103700408699Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCClipopolysaccharide core biosynthesis protein6e-1477.8
NC_011083:3915500:392477639247763925474699Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,lipopolysaccharide core biosynthesis protein RfaY6e-1477.8
NC_003197:3902500:391176639117663912464699Salmonella typhimurium LT2, complete genomelipopolysaccharide core biosynthetic protein6e-1477.8
NC_011149:3822000:383113438311343831832699Salmonella enterica subsp. enterica serovar Agona str. SL483,lipopolysaccharide core biosynthesis protein RfaY6e-1477.8
NC_016860:3925500:393466239346623935360699Salmonella enterica subsp. enterica serovar Typhimurium strlipopolysaccharide core biosynthesis protein6e-1477.8
NC_016863:3864000:387306538730653873763699Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1lipopolysaccharide core biosynthesis protein6e-1477.8
NC_006905:3845000:385406738540673854765699Salmonella enterica subsp. enterica serovar Choleraesuis strlipopolysaccharide core biosynthesis; modification of heptose region of the core5e-1477.8
NC_010102:3851500:386071338607133861411699Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-1477.8
NC_011080:3875320:388420338842033884901699Salmonella enterica subsp. enterica serovar Newport str. SL254,lipopolysaccharide core biosynthesis protein RfaY6e-1477.8
NC_016832:3900000:391097039109703911668699Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Lipopolysaccharide core heptose(II) kinase rfaY6e-1477.8
NC_004631:3910451:392217339221733922871699Salmonella enterica subsp. enterica serovar Typhi Ty2, completelipopolysaccharide core biosynthesis protein6e-1477.8
NC_003198:3924952:393667439366743937372699Salmonella enterica subsp. enterica serovar Typhi str. CT18,lipopolysaccharide core biosynthesis protein6e-1477.8
NC_017046:3923000:393190739319073932605699Salmonella enterica subsp. enterica serovar Typhimurium str. 798lipopolysaccharide core biosynthesis protein6e-1477.8
NC_016810:3923988:393308039330803933634555Salmonella enterica subsp. enterica serovar Typhimurium strlipopolysaccharide core biosynthesis protein9e-1477
NC_011094:3778000:378712037871203787818699Salmonella enterica subsp. enterica serovar Schwarzengrund strlipopolysaccharide core biosynthesis protein9e-1477
NC_016831:3875134:388601838860183886716699Salmonella enterica subsp. enterica serovar Gallinarum/pullorumlipopolysaccharide core biosynthesis protein1e-1376.6
NC_011205:3942500:395146439514643952162699Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853lipopolysaccharide core biosynthesis protein2e-1375.9
NC_011274:3894387:390527139052713905969699Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91lipopolysaccharide core biosynthesis protein2e-1375.9
NC_011294:3782655:379286737928673793565699Salmonella enterica subsp. enterica serovar Enteritidis strlipopolysaccharide core biosynthesis protein2e-1375.9
NC_011751:4251296:426265342626534263360708Escherichia coli UMN026 chromosome, complete genomelipopolysaccharide core biosynthesis protein3e-1168.9
NC_011353:4639002:465033846503384650844507Escherichia coli O157:H7 str. EC4115 chromosome, complete genomelipopolysaccharide core biosynthesis protein4e-1168.2
NC_011745:4226186:423753942375394238246708Escherichia coli ED1a chromosome, complete genomelipopolysaccharide core biosynthesis protein4e-1168.2
AP010958:4668181:467665846766584677365708Escherichia coli O103:H2 str. 12009 DNA, complete genomelipopolysaccharide core biosynthesis protein WaaY7e-1167.4
NC_004337:3761865:377287337728733773580708Shigella flexneri 2a str. 301, complete genomeputative LPS biosynthesis protein7e-1167.4
NC_004741:3992384:400163740016374002344708Shigella flexneri 2a str. 2457T, complete genomeputative LPS biosynthesis protein7e-1167.4
NC_004337:3590323:377287337728733773580708Shigella flexneri 2a str. 301, complete genomeputative LPS biosynthesis protein7e-1167.4
NC_013008:4595043:460637946063794607086708Escherichia coli O157:H7 str. TW14359 chromosome, complete genomelipopolysaccharide core biosynthesis protein7e-1167.4
NC_002655:4606000:461621746162174616924708Escherichia coli O157:H7 EDL933, complete genomeputative LPS biosynthesis protein7e-1167.4
NC_002695:4537000:454723445472344547941708Escherichia coli O157:H7 str. Sakai, complete genomelipopolysaccharide core biosynthesis protein WaaY7e-1167.4
NC_011748:4167043:417839741783974179104708Escherichia coli 55989, complete genomelipopolysaccharide core biosynthesis protein7e-1167.4
NC_008258:3995553:400476740047674005474708Shigella flexneri 5 str. 8401, complete genomeputative LPS biosynthesis protein7e-1167.4
CU928145:4167043:417839741783974179104708Escherichia coli 55989 chromosome, complete genomeLipopolysaccharide core biosynthesis protein rfaY7e-1167.4
NC_011415:4040211:405156540515654052272708Escherichia coli SE11 chromosome, complete genomelipopolysaccharide core biosynthesis protein7e-1167.4
NC_013353:4668181:467665846766584677365708Escherichia coli O103:H2 str. 12009, complete genomelipopolysaccharide core biosynthesis protein WaaY7e-1167.4
NC_013361:4991020:499949749994975000204708Escherichia coli O26:H11 str. 11368 chromosome, complete genomelipopolysaccharide core biosynthesis protein7e-1167.4
NC_013364:4460500:447077644707764471483708Escherichia coli O111:H- str. 11128, complete genomelipopolysaccharide core biosynthesis protein WaaY7e-1167.4
NC_013941:4427000:443717944371794437886708Escherichia coli O55:H7 str. CB9615 chromosome, complete genomelipopolysaccharide core biosynthesis protein7e-1167.4
NC_012125:3840000:384903538490353849619585Salmonella enterica subsp. enterica serovar Paratyphi C strainlipopolysaccharide core biosynthesis protein7e-1167.4
NC_017328:3794105:380511338051133805508396Shigella flexneri 2002017 chromosome, complete genomeputative LPS biosynthesis protein9e-0960.5