Pre_GI Gene

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Host: NC_008563 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008563:4083558 Escherichia coli APEC O1, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (serovar O1) is an avian pathogenic strain and causes respiratory, blood, and enteric infections primarily in poultry. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
40827384083571834predicted polysaccharide deacetylaseQuickGO ontologyBLASTP
408355840845921035predicted glycosyl transferase YibDQuickGO ontologyBLASTP
408483140858561026L-threonine 3-dehydrogenaseQuickGO ontologyBLASTP
4085866408706211972-amino-3-ketobutyrate coenzyme A ligaseQuickGO ontologyBLASTP
40872764088208933ADP-L-glycero-D-mannoheptose-6-epimerase NADP-bindingQuickGO ontologyBLASTP
408821840892641047ADP-heptoseLPS heptosyltransferase IIQuickGO ontologyBLASTP
40892684090248981ADP-heptoseLPS heptosyl transferase IQuickGO ontologyBLASTP
409031840915711254lipid A-core surface polymer ligaseQuickGO ontologyBLASTP
40916174092600984beta-13-glucosyltransferaseQuickGO ontologyBLASTP
409268240937101029UDP-galactosegalactosyl LPS alpha12-galactosyltransferaseQuickGO ontologyBLASTP
40937364094428693lipopolysaccharide core biosynthesis protein RfaYQuickGO ontologyBLASTP
40944384095433996lipopolysaccharide 12-glucosyltransferaseQuickGO ontologyBLASTP
409545040964661017lipopolysaccharide 13-galactosyltransferaseQuickGO ontologyBLASTP
40964824097288807lipopolysaccharide core biosynthesis protein RfaPQuickGO ontologyBLASTP
409727240983961125lipopolysaccharide core biosynthesis glucosyltransferase IQuickGO ontologyBLASTP
409839340994511059lipopolysaccharide core biosynthesis glycosyl transferase RfaQQuickGO ontologyBLASTP
4099864410114112783-deoxy-D-manno-octulosonic-acid transferaseQuickGO ontologyBLASTP
41016674102476810formamidopyrimidine-DNA glycosylaseQuickGO ontologyBLASTP
41032154103889675DNA repair protein RadCQuickGO ontologyBLASTP
410398341052751293bifunctional phosphopantothenoylcysteine decarboxylasephosphopantothenate synthaseQuickGO ontologyBLASTP
41052534105711459deoxyuridine 5-triphosphate nucleotidohydrolaseQuickGO ontologyBLASTP
41057764106414639putative transcriptional regulatorQuickGO ontologyBLASTP
41064514107107657orotate phosphoribosyltransferaseQuickGO ontologyBLASTP