Pre_GI: BLASTP Hits

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Query: NC_009439:3104000:3109398 Pseudomonas mendocina ymp, complete genome

Start: 3109398, End: 3109790, Length: 393

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013851:2211120:223816322381632238564402Allochromatium vinosum DSM 180 chromosome, complete genomeflagellar protein FliS1e-22105
NC_009092:1504363:156976115697611570171411Shewanella loihica PV-4, complete genomeflagellar protein FliS2e-1994.4
NC_009434:2006500:201584820158482016234387Pseudomonas stutzeri A1501, complete genomeflagellar protein FliS3e-1994
NC_007508:2277640:230054923005492300962414Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeflagellin-specific chaperone FliS3e-1994
NC_008340:774206:786827786827787264438Alkalilimnicola ehrlichei MLHE-1, complete genomeflagellar protein FliS3e-1994
NC_009439:3104000:310894531089453109325381Pseudomonas mendocina ymp, complete genomeflagellar protein FliS3e-1994
NC_008740:2905990:290843929084392908843405Marinobacter aquaeolei VT8, complete genomeflagellar protein FliS4e-1993.2
NC_015740:1845370:185346618534661853852387Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeflagellar protein FliS7e-1992.4
NC_015733:4253961:426173842617384262133396Pseudomonas putida S16 chromosome, complete genomeflagellar protein FliS1e-1891.7
NC_004547:1970686:197361519736151974025411Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeflagellar protein FliS9e-1889
NC_016112:806256:827372827372827794423Methylomicrobium alcaliphilum chromosome, complete genomeB-type flagellar protein fliS1e-1788.2
NC_012917:2921932:294232229423222942732411Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeflagellar protein FliS1e-1788.2
NC_016816:1912366:192923819292381929648411Pantoea ananatis LMG 5342, complete genomeflagellar biosynthesis protein FliS3e-1787
NC_015224:2017781:203170020317002032041342Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,flagellar protein FliS1e-1684.7
NC_008800:2695977:272166927216692722067399Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,flagellar protein FliS2e-1684.7
NC_014500:3023762:305026930502693050679411Dickeya dadantii 3937 chromosome, complete genomeflagellar biosynthesis protein fliS4e-1683.6
NC_016514:2950860:297299529729952973399405Enterobacter cloacae EcWSU1 chromosome, complete genomeflagellar protein fliS8e-1682.4
NC_011740:1189455:120898712089871209397411Escherichia fergusonii ATCC 35469, complete genomeflagellar protein potentiates polymerization7e-1682.4
NC_012912:1788308:179429917942991794709411Dickeya zeae Ech1591, complete genomeflagellar protein FliS1e-1478.6
NC_009778:1222273:124699412469941247404411Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-1477.8
NC_020260:1293860:132360613236061324016411Cronobacter sakazakii Sp291, complete genomeflagellar protein FliS2e-1477.8
NC_009138:1843998:188962818896281890113486Herminiimonas arsenicoxydans, complete genomeflagellar biosynthesis; repressor of class 3a and 3b operons (RflA activity) (partial match)4e-1476.6
NC_009348:2836969:284363828436382844060423Aeromonas salmonicida subsp. salmonicida A449, complete genomeflagellar protein FliS5e-1476.3
NC_013592:1730505:173527017352701735686417Dickeya dadantii Ech586, complete genomeflagellar protein FliS7e-1475.9
NC_008570:1852286:186332818633281863750423Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeflagellar protein FliS2e-1374.3
NC_014121:1357339:137321813732181373628411Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completelagellar protein FliS4e-1373.6
NC_016745:2913712:292711429271142927500387Oceanimonas sp. GK1 chromosome, complete genomeflagellar protein FliS4e-1373.2
NC_012880:1765920:182034418203441820751408Dickeya dadantii Ech703, complete genomeflagellar protein FliS1e-1272
NC_015276:3669263:368070836807083681130423Marinomonas mediterranea MMB-1 chromosome, complete genomeflagellar protein FliS3e-1270.9
NC_007759:1356439:137996713799671380491525Syntrophus aciditrophicus SB, complete genomeflagellin-specific chaperone3e-1270.5
NC_014378:261064:272439272439272894456Acetohalobium arabaticum DSM 5501 chromosome, complete genomeHpt protein4e-1270.1
NC_016616:1861852:187072918707291871172444Dechlorosoma suillum PS chromosome, complete genomeflagellar biosynthetic protein FliS1e-1168.6
NC_015424:1603000:161534816153481615770423Aeromonas veronii B565 chromosome, complete genomeflagellar protein FliS1e-1168.2
NC_015968:2845751:285157928515792851989411Enterobacter asburiae LF7a chromosome, complete genomeflagellar protein FliS2e-1167.8
NC_009348:381752:389001389001389393393Aeromonas salmonicida subsp. salmonicida A449, complete genomeLafC2e-1064.3
NC_015731:990000:100017010001701000598429Nitrosomonas sp. Is79A3 chromosome, complete genomeflagellar protein FliS3e-1063.9
NC_019978:2260395:226732122673212267740420Halobacteroides halobius DSM 5150, complete genomeflagellar biosynthetic protein FliS7e-1062.8
NC_015138:4905935:490862349086234909069447Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeflagellar protein FliS4e-0960.1
NC_014562:1844268:184569818456981846105408Pantoea vagans C9-1 chromosome, complete genomeFlagellar protein fliS4e-0960.1
NC_011899:1807365:182155618215561821978423Halothermothrix orenii H 168, complete genomeflagellar protein FliS5e-0959.7
NC_015563:606783:624564624564624977414Delftia sp. Cs1-4 chromosome, complete genomeflagellar protein FliS8e-0959.3
NC_014377:1546124:155822115582211558607387Thermosediminibacter oceani DSM 16646 chromosome, complete genomeflagellar protein FliS1e-0858.9
NC_014910:4026613:402661340266134027053441Alicycliphilus denitrificans BC chromosome, complete genomeflagellar protein flis3e-0857.4
NC_015850:1497998:151710915171091517486378Acidithiobacillus caldus SM-1 chromosome, complete genomeflagellar biosynthesis protein fliS3e-0857.4
NC_014837:2586870:259366225936622594069408Pantoea sp. At-9b chromosome, complete genomeflagellar protein FliS3e-0857.4
NC_020304:3447847:344875534487553449222468Desulfocapsa sulfexigens DSM 10523, complete genomeflagellar biosynthetic protein FliS4e-0856.6
NC_010002:661696:685521685521685934414Delftia acidovorans SPH-1, complete genomeflagellar protein FliS6e-0856.2
NC_006177:3192500:319856331985633198946384Symbiobacterium thermophilum IAM 14863, complete genomeflagellar protein1e-0755.1
NC_017195:3426000:343140734314073431808402Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeflagellar protein FliS2e-0754.3
NC_007644:779376:804107804107804523417Moorella thermoacetica ATCC 39073, complete genomeflagellar protein FliS3e-0754.3
NC_006510:3133965:313471731347173135118402Geobacillus kaustophilus HTA426, complete genomeflagellar protein FliS3e-0753.9
NC_004557:1826977:183234218323421832728387Clostridium tetani E88, complete genomeflagellar protein fliS3e-0753.9
NC_009699:2901497:291099429109942911383390Clostridium botulinum F str. Langeland chromosome, complete genomeflagellar protein FliS5e-0753.1
NC_017297:2905138:291113229111322911521390Clostridium botulinum F str. 230613 chromosome, complete genomeflagellar protein FliS5e-0753.1
NC_010520:2937981:294681229468122947201390Clostridium botulinum A3 str. Loch Maree, complete genomeflagellar protein FliS4e-0753.1
NC_015519:924000:930158930158930538381Tepidanaerobacter sp. Re1 chromosome, complete genomeflagellar protein FliS6e-0752.8
NC_005085:4157257:417726841772684177705438Chromobacterium violaceum ATCC 12472, complete genomeprobable flagellar protein FliS7e-0752.8
NC_019896:577594:592108592108592509402Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeFlagellar protein FliS8e-0752.4
NC_015391:2059191:209097420909742091342369Carnobacterium sp. 17-4 chromosome, complete genomeflagellar protein FliS9e-0752.4
NC_015660:391627:412871412871413269399Geobacillus thermoglucosidasius C56-YS93 chromosome, completeflagellar protein FliS1e-0652
NC_014650:376070:401490401490401888399Geobacillus sp. Y4.1MC1 chromosome, complete genomeflagellar protein FliS1e-0652
NC_020134:2772500:277250227725022772906405Clostridium stercorarium subsp. stercorarium DSM 8532, completeflagellar protein FliS2e-0651.6
NC_009495:2876865:288737328873732887771399Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeflagellar protein FliS1e-0651.6
NC_020210:3169258:316925831692583169659402Geobacillus sp. GHH01, complete genomechaperone for the export of flagellin1e-0651.6
NC_012563:3090954:310146231014623101851390Clostridium botulinum A2 str. Kyoto, complete genomeflagellar protein FliS1e-0651.6
NC_009697:2790277:280078528007852801174390Clostridium botulinum A str. ATCC 19397 chromosome, completeflagellar protein FliS1e-0651.6
NC_009698:2727203:273771127377112738100390Clostridium botulinum A str. Hall chromosome, complete genomeflagellar protein FliS1e-0651.6
NC_012658:2930244:293897829389782939358381Clostridium botulinum Ba4 str. 657 chromosome, complete genomeflagellar protein FliS1e-0651.6
NC_015425:1207314:121878112187811219182402Clostridium botulinum BKT015925 chromosome, complete genomeflagellar protein FliS2e-0651.2
NC_014328:1046958:106571010657101066096387Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeflagellar protein FliS6e-0649.7