Pre_GI: BLASTP Hits

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Query: NC_004088:3661601:3661601 Yersinia pestis KIM, complete genome

Start: 3661601, End: 3662422, Length: 822

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010465:933488:954042954042954863822Yersinia pseudotuberculosis YPIII, complete genomepyrroline-5-carboxylate reductase6e-149526
NC_010159:138879:138879138879139700822Yersinia pestis Angola, complete genomepyrroline-5-carboxylate reductase6e-149526
NC_008149:3529428:352942835294283530249822Yersinia pestis Nepal516, complete genomepyrroline-5-carboxylate reductase6e-149526
NC_008150:361224:383798383798384619822Yersinia pestis Antiqua, complete genomeputative pyrroline-5-carboxylate reductase6e-149526
NC_005810:3964468:398624339862433987064822Yersinia pestis biovar Microtus str. 91001, complete genomepyrroline-5-carboxylate reductase6e-149526
NC_003143:1033500:103352310335231034344822Yersinia pestis CO92, complete genomepyrroline-5-carboxylate reductase6e-149526
NC_009381:627685:648136648136648957822Yersinia pestis Pestoides F chromosome, complete genomepyrroline-5-carboxylate reductase6e-149526
NC_014029:1001000:102151310215131022334822Yersinia pestis Z176003 chromosome, complete genomepyrroline-5-carboxylate reductase6e-149526
NC_017154:941065:963658963658964479822Yersinia pestis D106004 chromosome, complete genomepyrroline-5-carboxylate reductase6e-149526
NC_017160:945176:965633965633966454822Yersinia pestis D182038 chromosome, complete genomepyrroline-5-carboxylate reductase6e-149526
NC_017168:50391:709307093071751822Yersinia pestis A1122 chromosome, complete genomepyrroline-5-carboxylate reductase6e-149526
NC_017265:854492:874944874944875765822Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative pyrroline-5-carboxylate reductase6e-149526
NC_010634:3692321:369232136923213693142822Yersinia pseudotuberculosis PB1/+, complete genomepyrroline-5-carboxylate reductase6e-149526
NC_006155:3779381:377938137793813780202822Yersinia pseudotuberculosis IP 32953, complete genomepyrroline-5-carboxylate reductase2e-148524
NC_009092:1305355:131063313106331311451819Shewanella loihica PV-4, complete genomepyrroline-5-carboxylate reductase3e-66251
NC_008340:362000:383708383708384535828Alkalilimnicola ehrlichei MLHE-1, complete genomepyrroline-5-carboxylate reductase8e-51200
NC_010682:3033646:303364630336463034515870Ralstonia pickettii 12J chromosome 1, complete sequencepyrroline-5-carboxylate reductase1e-41169
NC_004757:427483:445939445939446751813Nitrosomonas europaea ATCC 19718, complete genomepyrroline-5-carboxylate reductase1e-40166
NC_014752:23601:295332953330324792Neisseria lactamica ST-640, complete genomepyrroline-5-carboxylate reductase3e-39162
NC_014323:4355266:435526643552664356078813Herbaspirillum seropedicae SmR1 chromosome, complete genomepyrroline-5-carboxylate reductase3e-37155
NC_014623:6095658:611362561136256114458834Stigmatella aurantiaca DW4/3-1 chromosome, complete genomepyrroline-5-carboxylate reductase3e-34145
NC_007929:1290568:129455412945541295348795Lactobacillus salivarius subsp. salivarius UCC118, complete genomePyrroline-5-carboxylate reductase1e-33143
NC_014220:837926:852636852636853445810Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomepyrroline-5-carboxylate reductase2e-32139
NC_013891:353625:372808372808373608801Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomedelta 1-pyrroline-5-carboxylate reductase3e-31135
NC_004741:310382:333212333212334021810Shigella flexneri 2a str. 2457T, complete genomepyrroline-5-carboxylate reductase3e-31135
NC_004337:309833:334078334078334887810Shigella flexneri 2a str. 301, complete genomepyrroline-5-carboxylate reductase3e-31135
NC_017328:335160:351942351942352751810Shigella flexneri 2002017 chromosome, complete genomePyrroline-5-carboxylate reductase3e-31135
NC_014152:2181360:219702821970282197852825Thermincola sp. JR, complete genomepyrroline-5-carboxylate reductase3e-30132
NC_018750:3481476:350441135044113505220810Streptomyces venezuelae ATCC 10712, complete genomePyrroline-5-carboxylate reductase3e-29129
NC_014633:655693:666841666841667647807Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequencepyrroline-5-carboxylate reductase3e-29128
NC_004557:2552418:257166925716692572481813Clostridium tetani E88, complete genomepyrroline-5-carboxylate reductase1e-27124
NC_012982:2772976:277818127781812778978798Hirschia baltica ATCC 49814, complete genomepyrroline-5-carboxylate reductase9e-28124
NC_013768:418000:432235432235433035801Listeria monocytogenes 08-5923, complete genomepyrroline-5-carboxylate reductase1e-27123
NC_013766:417991:432214432214433014801Listeria monocytogenes 08-5578 chromosome, complete genomepyrroline-5-carboxylate reductase1e-27123
NC_003210:403743:417963417963418763801Listeria monocytogenes EGD-e, complete genomepyrroline-5-carboxylate reductase1e-27123
NC_015975:380500:403091403091403888798Lactobacillus ruminis ATCC 27782 chromosome, complete genomepyrroline-5-carboxylate reductase3e-27122
NC_009380:3734773:374808537480853748903819Salinispora tropica CNB-440 chromosome, complete genomepyrroline-5-carboxylate reductase1e-26120
NC_016584:3645245:365321236532123654021810Desulfosporosinus orientis DSM 765 chromosome, complete genomepyrroline-5-carboxylate reductase2e-26119
NC_015185:485866:487995487995488813819Desulfurobacterium thermolithotrophum DSM 11699 chromosome,pyrroline-5-carboxylate reductase3e-25115
NC_015703:1087809:109155610915561092359804Runella slithyformis DSM 19594 chromosome, complete genomepyrroline-5-carboxylate reductase1e-24113
NC_012779:3652737:365833136583313659140810Edwardsiella ictaluri 93-146, complete genomepyrroline-5-carboxylate reductase, putative5e-24111
NC_015591:1161007:116770611677061168545840Sinorhizobium meliloti AK83 chromosome 3, complete sequencepyrroline-5-carboxylate reductase4e-24111
NC_017190:2002718:200483220048322005680849Bacillus amyloliquefaciens LL3 chromosome, complete genomepyrroline-5-carboxylate reductase2e-23109
NC_014551:2057971:206007020600702060918849Bacillus amyloliquefaciens DSM 7, complete genomepyrroline-5-carboxylate reductase2e-23109
NC_008497:556365:572001572001572804804Lactobacillus brevis ATCC 367, complete genomePyrroline-5-carboxylate reductase2e-22106
NC_013508:3593000:359492735949273595736810Edwardsiella tarda EIB202, complete genomepyrroline-5-carboxylate reductase1e-22106
NC_018866:925704:925704925704926504801Dehalobacter sp. DCA chromosome, complete genomePyrroline-5-carboxylate reductase1e-22106
NC_012438:1514376:152756615275661528351786Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomepyrroline-5-carboxylate reductase6e-22104
NC_008525:1493317:149841914984191499210792Pediococcus pentosaceus ATCC 25745, complete genomePyrroline-5-carboxylate reductase4e-21102
NC_009004:2055563:205784520578452058636792Lactococcus lactis subsp. cremoris MG1363, complete genomepyrroline carboxylate reductase4e-21101
NC_002947:4293252:430607043060704306864795Pseudomonas putida KT2440, complete genomepyrroline-5-carboxylate reductase1e-20100
NC_015474:252390:260633260633261418786Pyrococcus sp. NA2 chromosome, complete genomepyrroline-5-carboxylate reductase3e-2099
NC_017219:1830353:184397218439721844793822Bifidobacterium longum subsp. infantis ATCC 15697, complete genomepyrroline-5-carboxylate reductase1e-1893.6
NC_011593:1830500:184418218441821845003822Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,pyrroline-5-carboxylate reductase1e-1893.6
NC_011529:806000:814651814651815439789Thermococcus onnurineus NA1, complete genomepyrroline-5-carboxylate reductase; (P5CR)1e-1893.6
NC_021175:751616:752881752881753681801Streptococcus oligofermentans AS 1.3089, complete genomepyrroline-5-carboxylate reductase1e-1893.6
NC_014657:1193985:121456912145691215351783Caldicellulosiruptor owensensis OL chromosome, complete genomepyrroline-5-carboxylate reductase5e-1891.7
NC_018145:50237:539115391154765855Zymomonas mobilis subsp. mobilis ATCC 29191 chromosome, completepyrroline-5-carboxylate reductase6e-1891.7
NC_006526:1303635:131850513185051319359855Zymomonas mobilis subsp. mobilis ZM4, complete genomepyrroline-5-carboxylate reductase9e-1890.9
NC_013520:1638000:164836916483691649163795Veillonella parvula DSM 2008, complete genomepyrroline-5-carboxylate reductase3e-1789.4
NC_002944:4446083:444878344487834449679897Mycobacterium avium subsp. paratuberculosis K-10, complete genomepyrroline-5-carboxylate reductase5e-1788.6
NC_009840:396319:413684413684414496813Prochlorococcus marinus str. MIT 9215, complete genomeDelta 1-pyrroline-5-carboxylate reductase7e-1787.8
NC_013132:782846:798098798098798898801Chitinophaga pinensis DSM 2588, complete genomepyrroline-5-carboxylate reductase2e-1686.7
NC_012804:1514533:151946315194631520239777Thermococcus gammatolerans EJ3, complete genomePyrroline-5-carboxylate reductase (proC)4e-1685.1
NC_008816:369074:387419387419388231813Prochlorococcus marinus str. AS9601, complete genomeDelta 1-pyrroline-5-carboxylate reductase5e-1685.1
NC_007577:353755:372101372101372913813Prochlorococcus marinus str. MIT 9312, complete genomepyrroline-5-carboxylate reductase5e-1581.6
NC_015428:1544728:154472815447281545525798Lactobacillus buchneri NRRL B-30929 chromosome, complete genomepyrroline-5-carboxylate reductase5e-1478.2
NC_017192:714346:726844726844727608765Arcobacter sp. L, complete genomepyrroline-5-carboxylate reductase1e-1377
NC_017218:1166844:118397111839711184792822Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomepyrroline-5-carboxylate reductase3e-1375.9
NC_008817:387408:406914406914407726813Prochlorococcus marinus str. MIT 9515, complete genomeDelta 1-pyrroline-5-carboxylate reductase4e-1375.5
NC_011887:110618:121794121794122624831Methylobacterium nodulans ORS 2060 plasmid pMNOD02, completepyrroline-5-carboxylate reductase1e-1273.6
NC_006055:44649:611266112661926801Mesoplasma florum L1, complete genome1-pyrroline-5-carboxylate reductase5e-1271.6
NC_008571:2229369:223318822331882233982795Gramella forsetii KT0803, complete genomepyrroline-5-carboxylate reductase9e-1270.9
NC_016048:3856665:387762638776263878441816Oscillibacter valericigenes Sjm18-20, complete genomepyrroline-5-carboxylate reductase1e-1170.5
NC_014804:341663:341663341663342445783Thermococcus barophilus MP chromosome, complete genomepyrroline-5-carboxylate reductase2e-1169.7
NC_015496:2436089:245561424556142456402789Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomepyrroline-5-carboxylate reductase2e-1066.2
NC_014011:813645:819324819324820139816Aminobacterium colombiense DSM 12261 chromosome, complete genomepyrroline-5-carboxylate reductase4e-1065.5
NC_016751:2044379:206367120636712064450780Marinitoga piezophila KA3 chromosome, complete genomepyrroline-5-carboxylate reductase7e-0961.2
NC_013592:3263005:328612932861293286932804Dickeya dadantii Ech586, complete genomepyrroline-5-carboxylate reductase9e-0960.8
NC_015733:2581324:260584126058412606620780Pseudomonas putida S16 chromosome, complete genomehypothetical protein2e-0859.7
NC_015416:223968:223968223968224780813Methanosaeta concilii GP-6 chromosome, complete genomeNADP oxidoreductase coenzyme F420-dependent6e-0858.2
NC_016628:935420:947133947133947897765Vibrio furnissii NCTC 11218 chromosome 2, complete sequencePyrroline-5-carboxylate reductase-like protein1e-0757