Pre_GI: BLASTN Hits

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Query: NC_021182:2883716 Clostridium pasteurianum BC1, complete genome

Start: 2883716, End: 2908567, Length: 24852

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008593:11032931103293112464521353Clostridium novyi NT, complete genome6e-100373BLASTN svgBLASTP svg
NC_010520:28609602860960288097120012Clostridium botulinum A3 str. Loch Maree, complete genome4e-95357BLASTN svgBLASTP svg
NC_014328:1135854*1135854115915023297Clostridium ljungdahlii ATCC 49587 chromosome, complete genome2e-81311BLASTN svgBLASTP svg
NC_020291:4903981*4903981494131537335Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome7e-81309BLASTN svgBLASTP svg
NC_010674:85839785839787856720171Clostridium botulinum B str. Eklund 17B, complete genome3e-71278BLASTN svgBLASTP svg
NC_010723:83387083387085686522996Clostridium botulinum E3 str. Alaska E43, complete genome2e-69272BLASTN svgBLASTP svg
NC_021182:29653952965395298850023106Clostridium pasteurianum BC1, complete genome2e-59238BLASTN svgBLASTP svg
NC_021182:29210002921000295537334374Clostridium pasteurianum BC1, complete genome2e-59238BLASTN svgBLASTP svg
NC_021182:40112940112942526224134Clostridium pasteurianum BC1, complete genome9e-59236BLASTN svgBLASTP svg
NC_021182:40228944022894404142618533Clostridium pasteurianum BC1, complete genome6e-57230BLASTN svgBLASTP svg
NC_021182:3525523*3525523356673741215Clostridium pasteurianum BC1, complete genome2e-56228BLASTN svgBLASTP svg
NC_021182:30041530041531873118317Clostridium pasteurianum BC1, complete genome2e-56228BLASTN svgBLASTP svg
NC_021182:34386013438601346026021660Clostridium pasteurianum BC1, complete genome3e-52214BLASTN svgBLASTP svg
NC_021182:14735351473535149659923065Clostridium pasteurianum BC1, complete genome3e-52214BLASTN svgBLASTP svg
NC_021182:380500*38050040092720428Clostridium pasteurianum BC1, complete genome1e-51212BLASTN svgBLASTP svg
NC_012563:29791472979147300249023344Clostridium botulinum A2 str. Kyoto, complete genome8e-50206BLASTN svgBLASTP svg
NC_021182:16549031654903167678221880Clostridium pasteurianum BC1, complete genome3e-49204BLASTN svgBLASTP svg
NC_021182:11880001188000121083922840Clostridium pasteurianum BC1, complete genome7e-41176BLASTN svgBLASTP svg
NC_021182:10777211077721109639718677Clostridium pasteurianum BC1, complete genome3e-40174BLASTN svgBLASTP svg
NC_021182:93000*9300014465551656Clostridium pasteurianum BC1, complete genome4e-36161BLASTN svgBLASTP svg
NC_021182:3409199*3409199343177822580Clostridium pasteurianum BC1, complete genome1e-33153BLASTN svgBLASTP svg
NC_021182:19834561983456200518921734Clostridium pasteurianum BC1, complete genome6e-32147BLASTN svgBLASTP svg
NC_021182:17617891761789178207920291Clostridium pasteurianum BC1, complete genome6e-32147BLASTN svgBLASTP svg
NC_021182:35768153576815360061123797Clostridium pasteurianum BC1, complete genome1e-30143BLASTN svgBLASTP svg
NC_021182:2667408*2667408269011022703Clostridium pasteurianum BC1, complete genome2e-28135BLASTN svgBLASTP svg
NC_021182:10095261009526103309923574Clostridium pasteurianum BC1, complete genome2e-28135BLASTN svgBLASTP svg
NC_021182:4427468*4427468445021222745Clostridium pasteurianum BC1, complete genome2e-26129BLASTN svgBLASTP svg
NC_021182:4602683*4602683462770125019Clostridium pasteurianum BC1, complete genome9e-25123BLASTN svgBLASTP svg
NC_021182:2360500*2360500238564325144Clostridium pasteurianum BC1, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_018664:16633241663324168566922346Clostridium acidurici 9a chromosome, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_021182:2059143*2059143208239023248Clostridium pasteurianum BC1, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_019908:852230*85223087389021661Brachyspira pilosicoli P43/6/78 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_018604:1329228*1329228134893419707Brachyspira pilosicoli WesB complete genome1e-0869.9BLASTN svgBLASTP svg
NC_018607:1134900*1134900115330818409Brachyspira pilosicoli B2904 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014330:2409559*2409559242845918901Brachyspira pilosicoli 95/1000 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_019978:62547662547664529019815Halobacteroides halobius DSM 5150, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011149:29122192912219296814855930Salmonella enterica subsp. enterica serovar Agona str. SL483,7e-0763.9BLASTN svgBLASTP svg
NC_003197:3005842*3005842306162755786Salmonella typhimurium LT2, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_003198:28565962856596290597449379Salmonella enterica subsp. enterica serovar Typhi str. CT18,7e-0763.9BLASTN svgBLASTP svg
NC_004631:28721922872192289431722126Salmonella enterica subsp. enterica serovar Typhi Ty2, complete7e-0763.9BLASTN svgBLASTP svg
NC_006511:28191282819128287100051873Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC7e-0763.9BLASTN svgBLASTP svg
NC_006905:29878632987863300811020248Salmonella enterica subsp. enterica serovar Choleraesuis str7e-0763.9BLASTN svgBLASTP svg
NC_010102:29674642967464302271055247Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,7e-0763.9BLASTN svgBLASTP svg
NC_011080:29823462982346303624053895Salmonella enterica subsp. enterica serovar Newport str. SL254,7e-0763.9BLASTN svgBLASTP svg
NC_011083:30097603009760303011220353Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,7e-0763.9BLASTN svgBLASTP svg
NC_008710:27720727720731812040914Borrelia turicatae 91E135, complete genome3e-0661.9BLASTN svgBLASTP svg