Pre_GI: BLASTN Hits

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Query: NC_008800:3279468 Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,

Start: 3279468, End: 3299850, Length: 20383

Host Lineage: Yersinia enterocolitica; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This isolate (strain 8081; NCTC 13174) is a mouse-lethal serotype of Yersinia enterocolitica that contains a high pathogenicity island (HPI) that encodes an iron uptake system (yersiniabactin) and a type II secretion system. Causes gastroenteritis. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This species is a food and waterborn pathogen that causes gastroenteritis (inflammation of the mucous membranes of the stomach and intestine) and is able to proliferate at temperatures as low as 4 degrees C.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015224:14402831440283145849618214Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,024960BLASTN svgBLASTP svg
NC_008150:27858302785830280809922270Yersinia pestis Antiqua, complete genome0809BLASTN svgBLASTP svg
NC_004547:442927*44292748635443428Erwinia carotovora subsp. atroseptica SCRI1043, complete genome4e-156559BLASTN svgBLASTP svg
NC_014840:76232762329583419603Pantoea sp. At-9b plasmid pPAT9B03, complete sequence2e-148533BLASTN svgBLASTP svg
NC_003143:28956172895617291809922483Yersinia pestis CO92, complete genome1e-137498BLASTN svgBLASTP svg
NC_004088:12917541291754131420722454Yersinia pestis KIM, complete genome1e-137498BLASTN svgBLASTP svg
NC_008149:12216371221637124331521679Yersinia pestis Nepal516, complete genome1e-137498BLASTN svgBLASTP svg
NC_012880:16134851613485164274129257Dickeya dadantii Ech703, complete genome1e-116428BLASTN svgBLASTP svg
NC_020064:1150982*1150982117040619425Serratia marcescens FGI94, complete genome1e-115424BLASTN svgBLASTP svg
NC_015968:511282*51128254179030509Enterobacter asburiae LF7a chromosome, complete genome2e-59238BLASTN svgBLASTP svg
NC_021066:1712905*1712905175859645692Raoultella ornithinolytica B6, complete genome1e-57232BLASTN svgBLASTP svg
NC_009832:42698044269804429650026697Serratia proteamaculans 568, complete genome4e-45190BLASTN svgBLASTP svg
NC_010465:24286202428620244757218953Yersinia pseudotuberculosis YPIII, complete genome8e-28133BLASTN svgBLASTP svg
NC_009348:1064664*1064664109873434071Aeromonas salmonicida subsp. salmonicida A449, complete genome3e-27131BLASTN svgBLASTP svg
NC_003143:22586362258636227843519800Yersinia pestis CO92, complete genome2e-25125BLASTN svgBLASTP svg
NC_004088:25410332541033256388322851Yersinia pestis KIM, complete genome2e-25125BLASTN svgBLASTP svg
NC_005810:20437302043730206409920370Yersinia pestis biovar Microtus str. 91001, complete genome2e-25125BLASTN svgBLASTP svg
NC_006155:23341222334122235510620985Yersinia pseudotuberculosis IP 32953, complete genome2e-25125BLASTN svgBLASTP svg
NC_008149:16699211669921169183421914Yersinia pestis Nepal516, complete genome2e-25125BLASTN svgBLASTP svg
NC_008150:15436351543635156595322319Yersinia pestis Antiqua, complete genome2e-25125BLASTN svgBLASTP svg
NC_010634:2252329*2252329227409821770Yersinia pseudotuberculosis PB1/+, complete genome2e-25125BLASTN svgBLASTP svg
NC_012214:12126161212616123625023635Erwinia pyrifoliae Ep1/96, complete genome7e-22113BLASTN svgBLASTP svg
NC_008322:1186000*1186000121709931100Shewanella sp. MR-7, complete genome3e-18101BLASTN svgBLASTP svg
NC_015379:35706583570658359449623839Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,3e-1591.7BLASTN svgBLASTP svg
NC_008150:28226892822689284340720719Yersinia pestis Antiqua, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_008149:11956141195614122004824435Yersinia pestis Nepal516, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_005810:12309761230976125037019395Yersinia pestis biovar Microtus str. 91001, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_004088:12657301265730129020024471Yersinia pestis KIM, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_003143:31159333115933313845922527Yersinia pestis CO92, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_013592:2968500*2968500300769039191Dickeya dadantii Ech586, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_002655:16559441655944168171125768Escherichia coli O157:H7 EDL933, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_002695:15713891571389159815826770Escherichia coli O157:H7 str. Sakai, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_004545:499709*49970952921829510Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome3e-1281.8BLASTN svgBLASTP svg
NC_020409:11737961173796119659322798Desulfovibrio piezophilus str. nov C1TLV30 chromosome, complete1e-1179.8BLASTN svgBLASTP svg
NC_013421:3117639*3117639314038322745Pectobacterium wasabiae WPP163, complete genome1e-1179.8BLASTN svgBLASTP svg
AP010958:13057121305712133215626445Escherichia coli O103:H2 str. 12009 DNA, complete genome4e-1177.8BLASTN svgBLASTP svg
CP002516:2786000*2786000281204426045Escherichia coli KO11, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_015061:1481500*1481500150744925950Rahnella sp. Y9602 chromosome, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_018419:428000*42800044959921600Secondary endosymbiont of Ctenarytaina eucalypti chromosome,2e-0971.9BLASTN svgBLASTP svg
NC_010498:1995500*1995500202472729228Escherichia coli SMS-3-5, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_011901:28333172833317285648223166Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete1e-0869.9BLASTN svgBLASTP svg
NC_015663:3586836*3586836361030823473Enterobacter aerogenes KCTC 2190 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009832:1280938*1280938130408723150Serratia proteamaculans 568, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_009648:2465613*2465613249720831596Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_013716:12989321298932132714328212Citrobacter rodentium ICC168, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014306:31020003102000312424122242Erwinia billingiae Eb661, complete genome9e-0660BLASTN svgBLASTP svg