Pre_GI: BLASTP Hits

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Query: NC_020134:845164:852707 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 852707, End: 853351, Length: 645

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014657:2236193:225926022592602259913654Caldicellulosiruptor owensensis OL chromosome, complete genome2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase3e-65248
NC_014652:163347:170852170852171499648Caldicellulosiruptor hydrothermalis 108 chromosome, complete2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase3e-65248
NC_014392:2311243:231734323173432317996654Caldicellulosiruptor obsidiansis OB47 chromosome, complete genome2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase6e-65246
NC_014721:2043910:204930220493022049949648Caldicellulosiruptor kristjanssonii 177R1B chromosome, complete2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase9e-65246
NC_015949:428923:439125439125439772648Caldicellulosiruptor lactoaceticus 6A chromosome, complete genome2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase9e-65246
NC_015949:47414:565195651957169651Caldicellulosiruptor lactoaceticus 6A chromosome, complete genome2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase2e-63241
NC_015519:1888917:189523218952321895873642Tepidanaerobacter sp. Re1 chromosome, complete genome2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase3e-54211
NC_008593:640000:649230649230649883654Clostridium novyi NT, complete genome2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase, putative1e-53209
NC_015425:841754:849223849223849867645Clostridium botulinum BKT015925 chromosome, complete genome2-dehydro-3-deoxyphosphogluconate aldolase3e-53207
NC_007644:416000:422912422912423556645Moorella thermoacetica ATCC 39073, complete genome2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase5e-52204
NC_014328:1263139:126410712641071264751645Clostridium ljungdahlii ATCC 49587 chromosome, complete genome2-keto-3-deoxy-6-phosphogluconate aldolase4e-50197
NC_013198:36829:568795687957529651Lactobacillus rhamnosus GG, complete genome2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase homolog4e-42171
NC_010516:359310:370832370832371479648Clostridium botulinum B1 str. Okra, complete genome2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase4e-40164
NC_013171:1731491:173954917395491740175627Anaerococcus prevotii DSM 20548, complete genome2-dehydro-3-deoxyphosphogluconate aldolase/4- hydroxy-2-oxoglutarate aldolase6e-39160
NC_014334:37040:510825108251732651Lactobacillus casei str. Zhang chromosome, complete genome2-keto-3-deoxy-6-phosphogluconate aldolase3e-38158
NC_013501:1337489:134685813468581347502645Rhodothermus marinus DSM 4252, complete genome2-dehydro-3-deoxyphosphogluconate aldolase/4- hydroxy-2-oxoglutarate aldolase1e-37156
NC_015389:809474:820487820487821137651Coriobacterium glomerans PW2 chromosome, complete genome2-keto-3-deoxy-phosphogluconate aldolase2e-37155
NC_009442:1158268:116845811684581169126669Streptococcus suis 05ZYH33 chromosome, complete genomeketo-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase4e-37154
NC_014650:2097900:210559821055982106251654Geobacillus sp. Y4.1MC1 chromosome, complete genome2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase8e-37153
NC_019978:2532640:254174325417432542399657Halobacteroides halobius DSM 5150, complete genomeEntner-Doudoroff aldolase4e-36151
NC_016023:1769925:180534118053411805958618Bacillus coagulans 36D1 chromosome, complete genome2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase2e-32139
NC_014206:1618988:163800316380031638659657Geobacillus sp. C56-T3 chromosome, complete genome2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase2e-31135
NC_006510:1995916:200024320002432000899657Geobacillus kaustophilus HTA426, complete genome2-dehydro-3-deoxyphosphogluconate aldolase3e-31135
NC_014377:1897857:190547719054771906109633Thermosediminibacter oceani DSM 16646 chromosome, complete genome2-keto-3-deoxy-phosphogluconate aldolase3e-30131
NC_015389:1782825:180390818039081804546639Coriobacterium glomerans PW2 chromosome, complete genome2-keto-3-deoxy-phosphogluconate aldolase1e-29129
NC_015589:2447132:244818124481812448813633Desulfotomaculum ruminis DSM 2154 chromosome, complete genome2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase8e-27120
NC_014206:1745203:174617217461721746822651Geobacillus sp. C56-T3 chromosome, complete genome2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase6e-26117
NC_016633:14000:313013130131936636Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeEntner-Doudoroff aldolase5e-26117
NC_019964:1873167:189004918900491890723675Halovivax ruber XH-70, complete genomeEntner-Doudoroff aldolase1e-25116
NC_014915:1880748:188514918851491885796648Geobacillus sp. Y412MC52 chromosome, complete genome2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase2e-25115
NC_013411:2739989:274521127452112745858648Geobacillus sp. Y412MC61, complete genome2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase2e-25115
NC_019974:2421422:244271724427172443370654Natronococcus occultus SP4, complete genome2-keto-3-deoxy-phosphogluconate aldolase2e-25115
NC_003888:3817000:383405538340553834702648Streptomyces coelicolor A3(2), complete genomealdolase3e-25115
NC_020210:1908000:192937919293791930029651Geobacillus sp. GHH01, complete genome2-keto-3-deoxygluconate-6-phosphate aldolase6e-25114
NC_009328:1867971:186878718687871869437651Geobacillus thermodenitrificans NG80-2 chromosome, complete genome2-keto-3-deoxy-6-phosphogluconate aldolase5e-24111
NC_019792:2416000:241765624176562418306651Natronobacterium gregoryi SP2 chromosome, complete genomeEntner-Doudoroff aldolase1e-23109
NC_018720:417500:426155426155426817663Bifidobacterium asteroides PRL2011 chromosome, complete genome2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase2e-23108
NC_013744:159861:167763167763168401639Haloterrigena turkmenica DSM 5511 plasmid pHTUR01, complete2-dehydro-3-deoxyphosphogluconate aldolase/4- hydroxy-2-oxoglutarate aldolase2e-23108
NC_015690:1542061:154478015447801545427648Paenibacillus mucilaginosus KNP414 chromosome, complete genome2-dehydro-3-deoxyphosphogluconate aldolase6e-23107
NC_016935:2069562:207228120722812072928648Paenibacillus mucilaginosus 3016 chromosome, complete genome2-dehydro-3-deoxyphosphogluconate aldolase6e-23107
NC_013526:911909:917772917772918389618Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genome2-dehydro-3-deoxyphosphogluconate aldolase/4- hydroxy-2-oxoglutarate aldolase4e-23107
NC_017095:119361:148485148485149105621Fervidobacterium pennivorans DSM 9078 chromosome, complete genome2-keto-3-deoxy-phosphogluconate aldolase7e-22103
NC_016776:3181706:320102832010283201696669Bacteroides fragilis 638R, complete genomeputative glyoxylate-related aldolase2e-21102
NC_006322:3628143:365308436530843653698615Bacillus licheniformis ATCC 14580, complete genomeKdgA3e-21102
NC_006270:3627974:365291536529153653538624Bacillus licheniformis ATCC 14580, complete genome2-keto-3-deoxygluconate-6-phosphate aldolase3e-21101
NC_013202:1144192:116839711683971169047651Halomicrobium mukohataei DSM 12286, complete genome2-dehydro-3-deoxyphosphogluconate aldolase/4- hydroxy-2-oxoglutarate aldolase4e-21101
NC_003228:3143470:316353431635343164202669Bacteroides fragilis NCTC 9343, complete genomeketo-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase1e-20100
NC_014041:3197192:320414832041483204819672Zunongwangia profunda SM-A87 chromosome, complete genomeketo-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase4e-1891.7
NC_013205:2332174:235253623525362353162627Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,2-dehydro-3-deoxyphosphogluconate aldolase/4- hydroxy-2-oxoglutarate aldolase5e-1890.9
NS_000191:120700:125094125094126059966Uncultured Termite group 1 bacterium phylotype Rs-D17, complete4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxyphosphogluconate aldolase1e-1789.7
NC_014363:8228:163851638517014630Olsenella uli DSM 7084 chromosome, complete genomeKDPG and KHG aldolase2e-1685.5
NC_007908:1010162:101189510118951012530636Rhodoferax ferrireducens T118, complete genomeKDPG and KHG aldolase5e-1684.7
NC_012846:1741000:176388517638851764550666Bartonella grahamii as4aup, complete genome2-dehydro-3-deoxyphosphogluconate aldolase / 4- hydroxy-2-oxoglutarate aldolase6e-1684.3
NC_004460:973738:976616976616977239624Vibrio vulnificus CMCP6 chromosome II, complete sequenceketo-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase8e-1683.6
NC_010001:69000:726357263573597963Clostridium phytofermentans ISDg, complete genome2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase3e-1581.6
NC_014550:3534000:354875235487523549396645Arthrobacter arilaitensis Re117, complete genome2-dehydro-3-deoxy-6-phosphogalactonate aldolase2e-1479
NC_015389:616430:682968682968683609642Coriobacterium glomerans PW2 chromosome, complete genome2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase2e-1479
NC_012691:241404:257959257959258606648Tolumonas auensis DSM 9187, complete genome2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase3e-1478.6
NC_016513:1761830:176450417645041765145642Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeketo-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase4e-1478.2
NC_010498:1094000:111175811117581112375618Escherichia coli SMS-3-5, complete genome2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase-like protein4e-1477.8
NC_015424:2357600:236980923698092370438630Aeromonas veronii B565 chromosome, complete genomeKHG/KDPG family aldolase/PfkB family carbohydrate kinase2e-1376.3
NC_009655:1626466:163496716349671635605639Actinobacillus succinogenes 130Z chromosome, complete genomeketo-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase1e-1376.3
NC_005956:1402500:142447914244791425144666Bartonella henselae str. Houston-1, complete genome2-keto-3-deoxy-6-phosphogluconate aldolase1e-1376.3
NC_013722:2150882:215617421561742156827654Xanthomonas albilineans, complete genomeputative keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase protein2e-1375.5
NC_015588:475723:480957480957481604648Isoptericola variabilis 225 chromosome, complete genome2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase3e-1375.1
NC_008010:200796:212717212717213349633Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase3e-1375.1
NC_016602:2292518:230821923082192308857639Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceketo-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase4e-1374.7
NC_019908:121178:132861132861133493633Brachyspira pilosicoli P43/6/78 chromosome, complete genomeketo-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase8e-1373.6
NC_014008:114000:128819128819129460642Coraliomargarita akajimensis DSM 45221 chromosome, complete genome2-dehydro-3-deoxyphosphogluconate aldolase/4- hydroxy-2-oxoglutarate aldolase1e-1272.8
NC_014330:505412:531272531272531904633Brachyspira pilosicoli 95/1000 chromosome, complete genomeketo-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase2e-1272.4
NC_008767:1321129:132112913211291321830702Neisseria meningitidis FAM18, complete genome2-keto-4-hydroxyglutarate aldolase7e-1270.5
NC_017513:1331623:133162313316231332261639Neisseria meningitidis G2136 chromosome, complete genome2-dehydro-3-deoxyphosphogluconate aldolase8e-1270.5
NC_020911:3046916:306601630660163066648633Octadecabacter antarcticus 307, complete genomeDgoA-like KHG/KDPG aldolase family protein9e-1270.5
NC_013016:1289975:128997512899751290613639Neisseria meningitidis alpha14 chromosome, complete genomeketo-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase9e-1270.5
NC_003112:1423528:142352814235281424166639Neisseria meningitidis MC58, complete genomeketo-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase1e-1170.1
NC_003116:1518110:151811015181101518748639Neisseria meningitidis Z2491, complete genomeketo-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase1e-1170.1
NC_017516:879834:907446907446908084639Neisseria meningitidis H44/76 chromosome, complete genome2-dehydro-3-deoxyphosphogluconate aldolase1e-1170.1
NC_017501:980848:9995169995161000154639Neisseria meningitidis 8013, complete genomeKHG/KDPG aldolase [includes: 4-hydroxy-2-oxoglutarate aldolase (2-keto-4-hydroxyglutarate aldolase; KHG-aldolase) and 2-dehydro-3-deoxy-phosphoglucona1e-1169.7
NC_017515:875500:896421896421897059639Neisseria meningitidis M04-240196 chromosome, complete genome2-dehydro-3-deoxyphosphogluconate aldolase3e-1168.6
NC_017505:1370128:137012813701281370766639Neisseria meningitidis alpha710 chromosome, complete genome2-keto-4-hydroxyglutarate aldolase4e-1168.2
NC_017514:863485:884858884858885496639Neisseria meningitidis M01-240149 chromosome, complete genome2-dehydro-3-deoxyphosphogluconate aldolase4e-1168.2
NC_017518:1449923:144992314499231450561639Neisseria meningitidis NZ-05/33 chromosome, complete genome2-dehydro-3-deoxyphosphogluconate aldolase4e-1168.2
NC_011740:3739395:373939537393953740099705Escherichia fergusonii ATCC 35469, complete genomephospho acidic carbohydrate aldolase1e-1066.6
NC_017080:3317701:331842633184263319112687Phycisphaera mikurensis NBRC 102666, complete genome4-hydroxy-2-ketovalerate aldolase2e-1065.5
NC_015953:1983821:199592519959251996584660Streptomyces sp. SirexAA-E chromosome, complete genome2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase4e-1064.7
NC_021150:3505234:350668635066863507336651Azotobacter vinelandii CA6, complete genomeKHG/KDPG aldolase5e-1064.7
NC_012560:3505235:350668735066873507337651Azotobacter vinelandii DJ, complete genomeKHG/KDPG aldolase5e-1064.7
NC_009997:2585588:258962525896252590266642Shewanella baltica OS195, complete genome2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase6e-1064.3
NC_016901:2542110:254894125489412549582642Shewanella baltica OS678 chromosome, complete genome2-dehydro-3-deoxyphosphogluconate aldolase6e-1064.3
NC_006677:435652:455536455536456159624Gluconobacter oxydans 621H, complete genomeKDPG aldolase4e-0961.6
NC_013421:2306000:230898623089862309627642Pectobacterium wasabiae WPP163, complete genome2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase4e-0961.6
NC_017047:2957957:296058029605802961197618Rahnella aquatilis HX2 chromosome, complete genome2-dehydro-3-deoxy-6-phosphogalactonate aldolase5e-0961.2
NC_015061:2927707:293033129303312930948618Rahnella sp. Y9602 chromosome, complete genomeKDPG and KHG aldolase5e-0961.2
NC_007384:1355060:137554313755431376184642Shigella sonnei Ss046, complete genome2-keto-3-deoxygluconate 6-phosphate aldolase/2-keto-4-hydroxyglutarate aldolase2e-0859.3
NC_016822:1339058:135839113583911359032642Shigella sonnei 53G, complete genomeketo-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase2e-0859.3
NC_006569:370846:370846370846371505660Silicibacter pomeroyi DSS-3 megaplasmid, complete sequence2-dehydro-3-deoxyphosphogluconate aldolase3e-0858.9
NC_005955:1166521:118697811869781187648671Bartonella quintana str. Toulouse, complete genome6e-0857.8
NC_012225:2523262:254269525426952543327633Brachyspira hyodysenteriae WA1, complete genome2-keto-3-deoxy-6-phosphogluconate aldolase6e-0857.8
NC_018607:921923:933112933112933744633Brachyspira pilosicoli B2904 chromosome, complete genome2-keto-3-deoxy-6-phosphogluconate aldolase7e-0857.4
NC_013440:6045708:606417660641766064835660Haliangium ochraceum DSM 14365, complete genome2-dehydro-3-deoxyphosphogluconate aldolase/4- hydroxy-2-oxoglutarate aldolase1e-0757
NC_012912:2553391:256941525694152570056642Dickeya zeae Ech1591, complete genome2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase1e-0756.6
NC_011071:10842:352723527235910639Stenotrophomonas maltophilia R551-3, complete genome2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase1e-0756.6
NC_008010:200796:215224215224215850627Deinococcus geothermalis DSM 11300 plasmid 1, complete sequenceKDPG and KHG aldolase2e-0755.8
NC_010581:709626:711247711247711903657Beijerinckia indica subsp. indica ATCC 9039, complete genome2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase2e-0755.8
NC_014006:611592:611592611592612221630Sphingobium japonicum UT26S chromosome 1, complete genome2-dehydro-3-deoxyphosphogalactonate aldolase4e-0755.1
NC_007947:797456:801290801290801919630Methylobacillus flagellatus KT, complete genome2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase1e-0653.1
NC_013791:1323903:132656713265671326845279Bacillus pseudofirmus OF4 chromosome, complete genomeD-mannonate oxidoreductase5e-0651.2