Pre_GI: BLASTP Hits

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Query: NC_018000:1914945:1936660 Sinorhizobium fredii USDA 257 chromosome, complete genome

Start: 1936660, End: 1937916, Length: 1257

Host Lineage: Sinorhizobium fredii; Sinorhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This organism, much like other Rhizobia, forms a symbiotic relationship with a leguminous plant, such as soybean, cowpea or pigeon pea. Expression of nodulation genes results in production of a nodulation signal which the plant cell recognizes inducing root nodule formation. The plant cell provides carbon compounds for the bacterium to grow on.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014640:5897421:5905688590568859071181431Achromobacter xylosoxidans A8 chromosome, complete genomeaminotransferase class V4e-91335
NC_007722:55558:7123871238724761239Erythrobacter litoralis HTCC2594, complete genomeputative sphingosine-1-phosphate lyase2e-70266
NC_013440:4235489:4240515424051542420591545Haliangium ochraceum DSM 14365, complete genomePyridoxal-dependent decarboxylase4e-67255
NC_000854:1:1392513925153191395Aeropyrum pernix K1, complete genomeputative pyridoxal-dependent decarboxylase6e-57221
NC_016885:1732257:1741246174124617425921347Pyrobaculum oguniense TE7 chromosome, complete genomeglutamate decarboxylase-related PLP-dependent protein1e-49197
NC_003901:1568000:1568868156886815700641197Methanosarcina mazei Go1, complete genomeL-tyrosine decarboxylase2e-36154
NC_013849:1396051:1399365139936514004561092Ferroglobus placidus DSM 10642 chromosome, complete genomePyridoxal-dependent decarboxylase4e-36152
NC_003413:1107965:1107965110796511090801116Pyrococcus furiosus DSM 3638, complete genomegroup II decarboxylase5e-29129
NC_000868:1168819:1169643116964311707971155Pyrococcus abyssi GE5, complete genomegroup ii decarboxylase5e-29129
NC_000961:828416:8464348464348475851152Pyrococcus horikoshii OT3, complete genomehypothetical protein1e-28127
NC_016051:1429800:1431252143125214324061155Thermococcus sp. AM4 chromosome, complete genomeL-tyrosine decarboxylase7e-27122
NC_012804:2017531:2022388202238820235391152Thermococcus gammatolerans EJ3, complete genomeL-tyrosine decarboxylase (mfnA)4e-26119
NC_011529:1554500:1575839157583915769901152Thermococcus onnurineus NA1, complete genomeglutamate decarboxylase4e-26119
NC_015859:3346473:3362573336257333639671395Corynebacterium variabile DSM 44702 chromosome, complete genomeglutamate decarboxylase7e-1892
AP010958:1711656:1713347171334717147471401Escherichia coli O103:H2 str. 12009 DNA, complete genomeglutamate decarboxylase B, PLP-dependent3e-1377
NC_010498:1659328:1680092168009216814921401Escherichia coli SMS-3-5, complete genomeglutamate decarboxylase GadA3e-1377
NC_008258:1750964:1769570176957017709701401Shigella flexneri 5 str. 8401, complete genomeglutamate decarboxylase isozyme3e-1377
NC_009801:1678790:1680481168048116818811401Escherichia coli E24377A, complete genomeglutamate decarboxylase GadB3e-1377
NC_007613:1533024:1554856155485615562561401Shigella boydii Sb227, complete genomeglutamate decarboxylase isozyme3e-1377
NC_002695:2091890:2091890209189020932901401Escherichia coli O157:H7 str. Sakai, complete genomeglutamate decarboxylase isozyme3e-1377
NC_004741:1792442:1807985180798518093851401Shigella flexneri 2a str. 2457T, complete genomeglutamate decarboxylase isozyme3e-1377
NC_011353:2004800:2006491200649120078911401Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeglutamate decarboxylase3e-1377
NC_004431:1754627:1756318175631817577871470Escherichia coli CFT073, complete genomeGlutamate decarboxylase beta2e-1377
NC_016822:1781644:1800442180044218018421401Shigella sonnei 53G, complete genomeglutamate decarboxylase2e-1377
NC_013941:1894496:1896187189618718975871401Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeglutamate decarboxylase beta3e-1377
NC_013364:1902761:1904452190445219058521401Escherichia coli O111:H- str. 11128, complete genomeglutamate decarboxylase3e-1377
NC_013361:2047170:2048861204886120502611401Escherichia coli O26:H11 str. 11368 chromosome, complete genomeglutamate decarboxylase3e-1377
NC_013353:1711656:1713347171334717147471401Escherichia coli O103:H2 str. 12009, complete genomeglutamate decarboxylase B, PLP-dependent3e-1377
CU928145:3983432:4031288403128840326881401Escherichia coli 55989 chromosome, complete genomeglutamate decarboxylase A, PLP-dependent3e-1376.6
NC_011748:3983432:4031288403128840326881401Escherichia coli 55989, complete genomeglutamate decarboxylase A, PLP-dependent3e-1376.6
AP010958:4313462:4333390433339043347901401Escherichia coli O103:H2 str. 12009 DNA, complete genomeglutamate decarboxylase A, PLP-dependent3e-1376.6
NC_000913:3624826:3664203366420336656031401Escherichia coli K12, complete genomeglutamate decarboxylase A, PLP-dependent3e-1376.6
NC_009800:3685651:3707491370749137088911401Escherichia coli HS, complete genomeglutamate decarboxylase GadA3e-1376.6
NC_012967:3549880:3595671359567135970711401Escherichia coli B str. REL606 chromosome, complete genomeglutamate decarboxylase A, PLP-dependent3e-1376.6
NC_013353:4313462:4333390433339043347901401Escherichia coli O103:H2 str. 12009, complete genomeglutamate decarboxylase A, PLP-dependent3e-1376.6
NC_013361:4566779:4586949458694945883491401Escherichia coli O26:H11 str. 11368 chromosome, complete genomeglutamate decarboxylase3e-1376.6
NC_010658:1593137:1594828159482815962281401Shigella boydii CDC 3083-94, complete genomeglutamate decarboxylase GadB3e-1376.6
NC_009380:4944183:4951026495102649524261401Salinispora tropica CNB-440 chromosome, complete genomeglutamate decarboxylase3e-1376.6
NC_011740:1595381:1613670161367016150701401Escherichia fergusonii ATCC 35469, complete genomeglutamate decarboxylase B, PLP-dependent5e-1376.3
NC_015224:3892972:3909568390956839109681401Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,glutamate decarboxylase4e-1376.3
NC_011740:2859933:2883597288359728849971401Escherichia fergusonii ATCC 35469, complete genomeglutamate decarboxylase A, PLP-dependent4e-1376.3
NC_004337:3590323:3695528369552836969281401Shigella flexneri 2a str. 301, complete genomeglutamate decarboxylase isozyme8e-1375.1
NC_008601:1811327:1822118182211818234641347Francisella tularensis subsp. novicida U112, complete genomeglutamate decarboxylase1e-1274.3
NC_005071:523423:5262825262825277211440Prochlorococcus marinus str. MIT 9313, complete genomeGlutamate decarboxylase3e-1273.2
NC_008800:4013298:4032296403229640336961401Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,glutamate decarboxylase3e-1273.2
NC_015696:486250:4919754919754930901116Francisella sp. TX077308 chromosome, complete genomeglutamate decarboxylase5e-1272.8
NC_006570:1794832:1807573180757318089191347Francisella tularensis subsp. tularensis Schu 4, complete genomeglutamate decarboxylase7e-1272.4
NC_008245:1794629:1807370180737018087161347Francisella tularensis subsp. tularensis FSC 198, complete genomeglutamate decarboxylase7e-1272.4
NC_016933:1870558:1883299188329918846451347Francisella tularensis TIGB03 chromosome, complete genomeGlutamate decarboxylase7e-1272.4
NC_016937:1794651:1807392180739218087381347Francisella tularensis subsp. tularensis TI0902 chromosome,glutamate decarboxylase7e-1272.4
NC_009257:78291:8558585585869311347Francisella tularensis subsp. tularensis WY96-3418 chromosome,glutamate decarboxylase1e-1171.2
NC_003155:4441559:4457596445759644589601365Streptomyces avermitilis MA-4680, complete genomeglutamate decarboxylase2e-1170.5
NC_007963:1190847:1190847119084711924391593Chromohalobacter salexigens DSM 3043, complete genomePyridoxal-dependent decarboxylase1e-0964.7
NC_000854:278711:2830682830682841561089Aeropyrum pernix K1, complete genomehypothetical protein3e-0963.2
NC_008752:4665699:4678164467816446796301467Acidovorax avenae subsp. citrulli AAC00-1, complete genomePyridoxal-dependent decarboxylase8e-0962
NC_015138:4666544:4679089467908946804861398Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeDiaminobutyrate decarboxylase9e-0962
NC_020063:2230000:2263872226387222653351464Enterobacteriaceae bacterium strain FGI 57, complete genomePLP-dependent enzyme, glutamate decarboxylase9e-0961.6
NC_014121:3483976:3498614349861435000801467Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completepyridoxal-dependent decarboxylase9e-0961.6
NC_015968:3053565:3074748307474830762141467Enterobacter asburiae LF7a chromosome, complete genomePyridoxal-dependent decarboxylase2e-0860.8
NC_010474:19256:3086530865322111347Synechococcus sp. PCC 7002 plasmid pAQ7, complete sequenceL-2,4-diaminobutyrate decarboxylase2e-0860.8
NC_009901:3317068:3318677331867733203231647Shewanella pealeana ATCC 700345, complete genomePyridoxal-dependent decarboxylase3e-0860.1
NC_012214:537000:5385555385555400271473Erwinia pyrifoliae Ep1/96, complete genomeL-2,4-diaminobutyrate decarboxylase5e-0859.3
NC_012917:2362725:2363934236393423654211488Pectobacterium carotovorum subsp. carotovorum PC1, complete genomePyridoxal-dependent decarboxylase2e-0757.4
NC_005773:4282840:4307552430755243089701419Pseudomonas syringae pv. phaseolicola 1448A, complete genomeL-2,4-diaminobutyrate decarboxylase3e-0756.6
NC_019978:1816940:1833357183335718345321176Halobacteroides halobius DSM 5150, complete genomecysteine desulfurase NifS4e-0756.2
NC_013440:1698047:1718903171890317203451443Haliangium ochraceum DSM 14365, complete genomePyridoxal-dependent decarboxylase4e-0756.2
NC_016894:377446:3846103846103860221413Acetobacterium woodii DSM 1030 chromosome, complete genomeglutamate decarboxylase Gad8e-0755.5
NC_011830:1288984:1314900131490013160541155Desulfitobacterium hafniense DCB-2, complete genomecysteine desulfurase family protein1e-0654.7
NC_014657:1518721:1538647153864715398311185Caldicellulosiruptor owensensis OL chromosome, complete genomecysteine desulfurase nifs2e-0654.3
NC_014392:969498:9896569896569908401185Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomecysteine desulfurase NifS2e-0653.9
NC_011899:948790:9560389560389572161179Halothermothrix orenii H 168, complete genomeaminotransferase class V2e-0653.9
NC_014652:1032711:1054471105447110556641194Caldicellulosiruptor hydrothermalis 108 chromosome, completecysteine desulfurase nifs2e-0653.5
NC_015949:1180755:1200206120020612013901185Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomecysteine desulfurase3e-0653.1
NC_014721:1777644:1797110179711017982941185Caldicellulosiruptor kristjanssonii 177R1B chromosome, completecysteine desulfurase nifs3e-0653.1
NC_016582:10137951:1015568010155680101571191440Streptomyces bingchenggensis BCW-1 chromosome, complete genomearomatic-L-amino-acid decarboxylase6e-0652.4
NC_013929:7606749:7618574761857476198931320Streptomyces scabiei 87.22 chromosome, complete genomeamino acid decarboxylase7e-0652.4