Pre_GI Gene

Some Help

Host: NC_013929 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013929:7606749 Streptomyces scabiei 87.22 chromosome, complete genome

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
760674976079061158thiolaseQuickGO ontologyBLASTP
760803676090971062oxidoreductaseQuickGO ontologyBLASTP
76090977609861765hypothetical proteinBLASTP
76098407610688849CoA-transferaseQuickGO ontologyBLASTP
76106817611472792enoyl-CoA hydrataseQuickGO ontologyBLASTP
76115397612351813dehydrogenaseQuickGO ontologyBLASTP
76123517613277927dehydrogenaseQuickGO ontologyBLASTP
76136497614560912hypothetical proteinBLASTP
76146637615097435chorismate mutaseQuickGO ontologyBLASTP
76151697615690522two-component system response regulatorQuickGO ontologyBLASTP
761578176182852505aminopeptidaseQuickGO ontologyBLASTP
761857476198931320amino acid decarboxylaseQuickGO ontologyBLASTP
761989076213261437hypothetical proteinBLASTP
7622382762419318125 nucleotidaseQuickGO ontologyBLASTP
76243937625121729hypothetical proteinBLASTP
762526976267051437pyruvate kinaseQuickGO ontologyBLASTP
76267107627498789hypothetical proteinBLASTP
7627583762766583tRNA-LeuQuickGO ontology
76277587628411654two-component system response regulatorQuickGO ontologyBLASTP
76284967629212717ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
76292097630120912ABC transporter ATP-binding proteinQuickGO ontologyBLASTP