Pre_GI: BLASTP Hits

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Query: NC_017986:2548720:2572480 Pseudomonas putida ND6 chromosome, complete genome

Start: 2572480, End: 2573706, Length: 1227

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012660:3320330:3339051333905133403041254Pseudomonas fluorescens SBW25 chromosome, complete genomeputative exported family S43 non-peptidase homologue2e-115416
NC_012660:1579204:1598386159838615996781293Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein8e-98357
NC_009434:3434381:3462841346284134641151275Pseudomonas stutzeri A1501, complete genomeporin9e-86317
NC_002947:4293252:4294069429406942953701302Pseudomonas putida KT2440, complete genomeporin, putative1e-83310
NC_007492:2994036:3012598301259830138991302Pseudomonas fluorescens PfO-1, complete genomeouter membrane porin2e-83309
NC_015740:3486226:3490394349039434916561263Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein2e-83309
NC_009512:2238437:2259992225999222612811290Pseudomonas putida F1, complete genomeouter membrane porin3e-82305
NC_012560:4929683:4951297495129749525651269Azotobacter vinelandii DJ, complete genomeBacterial outer membrane porin6e-82304
NC_021150:4929670:4951284495128449525521269Azotobacter vinelandii CA6, complete genomeouter membrane porin6e-82304
NC_002516:2306776:2323554232355423247831230Pseudomonas aeruginosa PAO1, complete genomeprobable porin2e-81302
NC_009439:4734237:4747711474771147490301320Pseudomonas mendocina ymp, complete genomeouter membrane porin2e-80300
NC_012560:5019900:5021653502165350229781326Azotobacter vinelandii DJ, complete genomeOprE-like outer membrane porin1e-79297
NC_021150:5019887:5021640502164050229651326Azotobacter vinelandii CA6, complete genomeOprE-like outer membrane porin1e-79297
NC_021150:3200959:3222478322247832237971320Azotobacter vinelandii CA6, complete genomeOprE-like outer membrane porin2e-78293
NC_012560:3200961:3222480322248032237991320Azotobacter vinelandii DJ, complete genomeOprE-like outer membrane porin2e-78293
NC_015410:3003417:3011502301150230126981197Pseudomonas mendocina NK-01 chromosome, complete genomeporin1e-76287
NC_017986:5833819:5859445585944558606831239Pseudomonas putida ND6 chromosome, complete genomeouter membrane porin4e-76285
NC_009439:1297851:1314978131497813163061329Pseudomonas mendocina ymp, complete genomeouter membrane porin3e-74279
NC_009512:1518113:1531521153152115327471227Pseudomonas putida F1, complete genomeouter membrane porin2e-71269
NC_010501:3448389:3457520345752034587941275Pseudomonas putida W619, complete genomeouter membrane porin1e-65250
NC_010501:4989455:4996865499686549981391275Pseudomonas putida W619, complete genomeouter membrane porin8e-61234
NC_021150:1677811:1697174169717416983911218Azotobacter vinelandii CA6, complete genomeouter membrane porin7e-60231
NC_012560:1677798:1697161169716116983781218Azotobacter vinelandii DJ, complete genomeBacterial outer membrane porin7e-60231
NC_002516:1031386:1043983104398310453141332Pseudomonas aeruginosa PAO1, complete genomeBasic amino acid, basic peptide and imipenem outer membrane porin OprD precursor5e-60231
NC_016830:6499234:6514151651415165154701320Pseudomonas fluorescens F113 chromosome, complete genomeprotein OprD2e-57223
NC_009512:5920960:5928954592895459301951242Pseudomonas putida F1, complete genomeouter membrane porin1e-53210
NC_009439:2427120:2449480244948024508021323Pseudomonas mendocina ymp, complete genomeouter membrane porin1e-51204
NC_009434:3611738:3695568369556836968871320Pseudomonas stutzeri A1501, complete genomeouter membrane porin6e-51201
NC_015740:1291739:1301977130197713032961320Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeouter membrane porin6e-51201
NC_010501:30000:6908569085704281344Pseudomonas putida W619, complete genomeouter membrane porin1e-48194
NC_002947:8394:5239452394537371344Pseudomonas putida KT2440, complete genomeporin, putative1e-48194
NC_009512:27783:6436964369657121344Pseudomonas putida F1, complete genomeouter membrane porin1e-48194
NC_010322:29983:6515165151664941344Pseudomonas putida GB-1 chromosome, complete genomeouter membrane porin1e-48194
NC_017986:2548720:2598569259856925999121344Pseudomonas putida ND6 chromosome, complete genomeporin1e-48194
NC_015733:5909821:5946188594618859475311344Pseudomonas putida S16 chromosome, complete genomeouter membrane porin9e-49194
NC_010501:3671517:3682477368247736837901314Pseudomonas putida W619, complete genomeouter membrane porin2e-48193
NC_009439:1297851:1318463131846313198031341Pseudomonas mendocina ymp, complete genomeouter membrane porin3e-48192
NC_015556:1188500:1198293119829311995401248Pseudomonas fulva 12-X chromosome, complete genomeouter membrane porin3e-43176
NC_010501:5442000:5457529545752954588481320Pseudomonas putida W619, complete genomeouter membrane porin2e-37156
NC_007005:5825925:5842863584286358441371275Pseudomonas syringae pv. syringae B728a, complete genomeouter membrane porin1e-36154
NC_004578:6089958:6121092612109261223661275Pseudomonas syringae pv. tomato str. DC3000, complete genomeouter membrane porin, OprD family9e-37154
NC_005773:176885:1828831828831841571275Pseudomonas syringae pv. phaseolicola 1448A, complete genomeouter membrane porin, OprD family1e-35150
NC_020209:5077410:5080673508067350819741302Pseudomonas poae RE*1-1-14, complete genomeouter membrane protein, oprE34e-35149
NC_004129:5723787:5753548575354857548671320Pseudomonas fluorescens Pf-5, complete genomeporin D5e-27122
NC_004129:1014986:1019646101964610210521407Pseudomonas fluorescens Pf-5, complete genomeouter membrane porin, OprD family6e-25115
NC_010611:240839:2467232467232481321410Acinetobacter baumannii ACICU, complete genomeputative outer membrane protein5e-21102