Pre_GI Gene

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Host: NC_009434 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009434:3434381 Pseudomonas stutzeri A1501, complete genome

Host Lineage: Pseudomonas stutzeri; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain (A1501; CGMCC 0351) was isolated from rice roots that had been inoculated with strain A15 in a rice paddy in China. It is considered wild-type and has been studied for the nitrogen-fixation process and is used as an inoculant during rice cultivation. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas stutzeri is a nonfluorescent denitrifying bacterium widely distributed in the environment.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
34343813435310930ribose-phosphate pyrophosphokinaseQuickGO ontologyBLASTP
3435430343604761850S ribosomal protein L25general stress protein CtcQuickGO ontologyBLASTP
34362853436665381peptidyl-tRNA hydrolaseQuickGO ontologyBLASTP
343669034377901101translation-associated GTPaseQuickGO ontologyBLASTP
343782934391961368phage integrase family site specific recombinaseQuickGO ontologyBLASTP
343945734405181062fic family proteinQuickGO ontologyBLASTP
344051534438233309ATP-dependent helicase HEPAQuickGO ontologyBLASTP
344381334475413729hypothetical proteinBLASTP
344933034512011872hypothetical proteinBLASTP
345119834526551458piwi domain-containing proteinQuickGO ontologyBLASTP
34526603453523864integraseQuickGO ontologyBLASTP
34539403454230291hypothetical proteinBLASTP
34542273454571345ISPsy5 Orf1QuickGO ontologyBLASTP
345469334562311539ISPpu14 transposase Orf3QuickGO ontologyBLASTP
34566953457096402hypothetical protein
345777434587811008branched-chain amino acid ABC transporter permease proteinQuickGO ontologyBLASTP
34587843459671888branched-chain amino acid ABC transporter permease proteinQuickGO ontologyBLASTP
345974134607931053ABC transporter substrate-binding proteinQuickGO ontologyBLASTP
34610303461746717branched-chain amino acid ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
34617433462519777branched-chain amino acid transport protein BraFQuickGO ontologyBLASTP
346284134641151275porinQuickGO ontologyBLASTP