Pre_GI: BLASTP Hits

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Query: NC_016860:3964000:3981094 Salmonella enterica subsp. enterica serovar Typhimurium str

Start: 3981094, End: 3981858, Length: 765

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. This strain was isolated in Japan in 2000. It is of definitive phage type 12 (DT12) and resistant against mulitple antimicrobials including fluoroquinolones.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:3905875:391949739194973920354858Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transcriptional regulator2e-150531
NC_012125:3879917:389149138914913892279789Salmonella enterica subsp. enterica serovar Paratyphi C straintranscriptional regulator8e-150529
NC_011149:3863913:388269238826923883456765Salmonella enterica subsp. enterica serovar Agona str. SL483,transcriptional regulatory protein, C5e-149526
NC_003198:3881221:388983538898353890691857Salmonella enterica subsp. enterica serovar Typhi str. CT18,7e-64243
NC_016832:3858815:386464338646433864978336Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Transcriptional regulatory protein, C2e-60232
NC_009648:293052:307297307297308121825Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative sensory transducer4e-59228
NC_011750:3407500:341703634170363417845810Escherichia coli IAI39 chromosome, complete genomeputative transcriptional regulator8e-58223
NC_011751:3285646:329512932951293295938810Escherichia coli UMN026 chromosome, complete genomeputative transcriptional regulator8e-58223
NC_013941:3540420:354897935489793549788810Escherichia coli O55:H7 str. CB9615 chromosome, complete genomesensory transducer6e-57220
NC_013008:3761467:377002637700263770835810Escherichia coli O157:H7 str. TW14359 chromosome, complete genometranscriptional regulator6e-57220
NC_011353:3805819:381530038153003816109810Escherichia coli O157:H7 str. EC4115 chromosome, complete genometranscriptional regulator6e-57220
NC_002695:3702344:371090337109033711712810Escherichia coli O157:H7 str. Sakai, complete genomeputative sensory transducer6e-57220
NC_014618:2989000:299825829982582999097840Enterobacter cloacae SCF1 chromosome, complete genometranscriptional regulator CadC4e-56218
NC_002655:3769643:377820237782023779011810Escherichia coli O157:H7 EDL933, complete genomeputative sensory transducer8e-56217
NC_010468:906957:931392931392932201810Escherichia coli ATCC 8739, complete genometranscriptional regulator, CadC2e-55215
NC_009800:2995958:300682330068233007632810Escherichia coli HS, complete genometranscriptional regulatory protein, C terminal2e-55215
NC_011748:3196173:320565432056543206463810Escherichia coli 55989, complete genomeputative transcriptional regulator3e-55215
CU928145:3196173:320565432056543206463810Escherichia coli 55989 chromosome, complete genomeputative transcriptional regulator3e-55215
CP002516:903241:926665926665927474810Escherichia coli KO11, complete genometranscriptional regulator, CadC5e-55214
CP002185:3167738:317860331786033179412810Escherichia coli W, complete genomepredicted transcriptional regulator5e-55214
NC_009801:3175714:318519531851953186004810Escherichia coli E24377A, complete genometranscriptional regulatory protein, C terminal5e-55214
CU928160:3030324:303980530398053040614810Escherichia coli IAI1 chromosome, complete genomeputative transcriptional regulator5e-55214
NC_011415:3217796:322727732272773228086810Escherichia coli SE11 chromosome, complete genomeputative transcriptional regulator5e-55214
NC_011741:3030324:303980530398053040614810Escherichia coli IAI1 chromosome, complete genomeputative transcriptional regulator5e-55214
NC_013361:3867558:387703938770393877848810Escherichia coli O26:H11 str. 11368 chromosome, complete genometranscriptional regulator5e-55214
NC_013364:3552284:356177135617713562580810Escherichia coli O111:H- str. 11128, complete genomeputative transcriptional regulator5e-55214
NC_012759:2862807:287367228736722874481810Escherichia coli BW2952 chromosome, complete genomeputative transcriptional regulator3e-55214
NC_000913:2975659:298652429865242987333810Escherichia coli K12, complete genomepredicted transcriptional regulator3e-55214
NC_010473:3069529:308039430803943081203810Escherichia coli str. K-12 substr. DH10B, complete genomepredicted transcriptional regulator3e-55214
AC_000091:2976293:298715829871582987967810Escherichia coli W3110 DNA, complete genomepredicted transcriptional regulator3e-55214
NC_016902:903241:926665926665927474810Escherichia coli KO11FL chromosome, complete genometranscriptional regulator CadC5e-55214
NC_013353:3474077:348355834835583484367810Escherichia coli O103:H2 str. 12009, complete genometranscriptional regulator1e-54213
AP010958:3474077:348355834835583484367810Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted transcriptional regulator1e-54213
NC_007384:3151344:3160819316081931624041586Shigella sonnei Ss046, complete genome4e-32138
NC_002695:1329472:133949113394911340303813Escherichia coli O157:H7 str. Sakai, complete genomeputative transcriptional regulator2e-30132
NC_002655:1413244:142326314232631424075813Escherichia coli O157:H7 EDL933, complete genomehypothetical protein2e-30132
NC_011353:1271335:128176912817691282581813Escherichia coli O157:H7 str. EC4115 chromosome, complete genometranscriptional regulator2e-30132
NC_013008:1271621:128205512820551282867813Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein2e-30132
NC_013941:1314158:132417513241751324987813Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein2e-30132
NC_014618:1700784:170658417065841707351768Enterobacter cloacae SCF1 chromosome, complete genometranscriptional regulator CadC7e-29127
NC_009648:4958500:497541949754194976093675Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative transcriptional regulatory protein5e-1891.3
NC_016845:411844:429083429083429727645Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein8e-1890.9
NC_012731:403670:420529420529421224696Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative transcriptional regulatory protein7e-1890.9
NC_016612:1840325:185718718571871857753567Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative transcriptional regulatory protein2e-1789.7
NC_021066:3769405:377676637767663777620855Raoultella ornithinolytica B6, complete genometranscriptional regulator2e-1789.4
NC_013850:4993307:499819349981934998837645Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, CadC4e-1788.6
NC_016822:3282654:329480632948063295141336Shigella sonnei 53G, complete genomeputative transcriptional regulator1e-1480.1
NC_020181:3518396:352330035233003523851552Enterobacter aerogenes EA1509E, complete genomeputative transcriptional regulatory protein2e-1479.7
NC_015663:1934863:194734419473441947895552Enterobacter aerogenes KCTC 2190 chromosome, complete genomeCadC family transcriptional regulator2e-1479.7
NC_015663:1:210462104621852807Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative transcriptional regulator2e-1479.7
NC_016816:2508204:251985925198592520752894Pantoea ananatis LMG 5342, complete genomeputative transcriptional regulator3e-1479
NC_013956:1994970:200213620021362003050915Pantoea ananatis LMG 20103 chromosome, complete genomeYqeI3e-1479
NC_010694:436500:453335453335454240906Erwinia tasmaniensis, complete genomePutative transcriptional regulator2e-1376.3
NC_014306:1981956:198744719874471988298852Erwinia billingiae Eb661, complete genomeTranscriptional regulatory protein4e-1375.1
NC_015663:5253242:526920552692055269951747Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein1e-1067.4
NC_021066:4906239:492072549207254921480756Raoultella ornithinolytica B6, complete genomeDNA-binding protein with winged-HTH domain4e-1065.1
NC_020063:3690308:372029837202983721065768Enterobacteriaceae bacterium strain FGI 57, complete genomeDNA-binding protein with winged-HTH domain4e-1065.1
NC_009832:5214850:522198652219865222753768Serratia proteamaculans 568, complete genometranscriptional regulator, CadC7e-1064.7
NC_013508:3188978:320403432040343204789756Edwardsiella tarda EIB202, complete genomehypothetical protein9e-1063.9
NC_020211:103371:114278114278115075798Serratia marcescens WW4, complete genomehypothetical protein1e-0963.5
NC_015566:5197624:520388652038865204656771Serratia sp. AS12 chromosome, complete genometranscriptional regulator CadC2e-0963.2
NC_014121:3453815:346184634618463462583738Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein2e-0962.8
NC_015968:3023048:303106230310623031793732Enterobacter asburiae LF7a chromosome, complete genometranscriptional regulator, CadC3e-0962.4
NC_016612:178864:189926189926190666741Klebsiella oxytoca KCTC 1686 chromosome, complete genometranscriptional regulator7e-0960.8
NC_008258:3550500:356146835614683562232765Shigella flexneri 5 str. 8401, complete genomehypothetical protein8e-0960.8
NC_004741:4160500:417218241721824172946765Shigella flexneri 2a str. 2457T, complete genomehypothetical protein2e-0859.3
NC_004337:3590323:360105736010573601821765Shigella flexneri 2a str. 301, complete genomehypothetical protein2e-0859.3
NC_017328:3625000:363577336357733636537765Shigella flexneri 2002017 chromosome, complete genomeTranscriptional regulator, CadC2e-0859.3
NC_016514:891772:918584918584919363780Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein7e-0857.8
NC_016612:2223357:223653822365382236981444Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein1e-0757
NC_013892:1503162:152270715227071523510804Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein2e-0756.6
NC_020181:1317647:132480113248011325454654Enterobacter aerogenes EA1509E, complete genomehypothetical protein3e-0755.8
NC_014306:1981956:199196619919661992739774Erwinia billingiae Eb661, complete genomePutative response regulator3e-0755.8
NC_020064:1962172:198639919863991986998600Serratia marcescens FGI94, complete genomeDNA-binding protein with winged-HTH domain3e-0755.5
NC_009832:5214850:522341452234145224184771Serratia proteamaculans 568, complete genometranscriptional regulator, CadC4e-0755.5
NC_016612:5296076:532264453226445323465822Klebsiella oxytoca KCTC 1686 chromosome, complete genometranscriptional regulator5e-0755.1
NC_020063:4170464:417859241785924179335744Enterobacteriaceae bacterium strain FGI 57, complete genomeDNA-binding protein with winged-HTH domain2e-0653.1