Pre_GI: BLASTP Hits

Some Help

Query: NC_015761:2982000:3006262 Salmonella bongori NCTC 12419, complete genome

Start: 3006262, End: 3007170, Length: 909

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013282:3216226:322811032281103228895786Cronobacter turicensis, complete genomehypothetical protein2e-97355
NC_020063:4653422:467165046716504672348699Enterobacteriaceae bacterium strain FGI 57, complete genomeouter membrane protein (porin)3e-21102
NC_009792:1345500:135474313547431355540798Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein9e-1994.4
NC_008258:4345400:435638343563834357099717Shigella flexneri 5 str. 8401, complete genomehypothetical protein1e-1687.4
NC_002695:5381576:539369353936935394409717Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-1687.4
NC_011750:4978000:498624049862404986956717Escherichia coli IAI39 chromosome, complete genomeN-acetylnuraminic acid outer membrane channel protein1e-1687.4
NC_011751:5070597:507814450781445078860717Escherichia coli UMN026 chromosome, complete genomeN-acetylnuraminic acid outer membrane channel protein1e-1687.4
NC_009800:4529504:454378845437884544504717Escherichia coli HS, complete genomeoligogalacturonate-specific porin protein (KdgM)1e-1687.4
AC_000091:4534935:454346545434654544181717Escherichia coli W3110 DNA, complete genomeN-acetylnuraminic acid outer membrane channel protein1e-1687.4
AP010958:5272863:529366252936625294378717Escherichia coli O103:H2 str. 12009 DNA, complete genomeN-acetylnuraminic acid outer membrane channel protein1e-1687.4
NC_008253:4817864:484401648440164844732717Escherichia coli 536, complete genomehypothetical protein YjhA precursor1e-1687.4
CP002185:4791811:480122848012284801944717Escherichia coli W, complete genomeN-acetylnuraminic acid outer membrane channel protein1e-1687.4
CU928160:4570498:459942945994294600145717Escherichia coli IAI1 chromosome, complete genomeN-acetylnuraminic acid outer membrane channel protein1e-1687.4
NC_010473:4630361:463861646386164639332717Escherichia coli str. K-12 substr. DH10B, complete genomeN-acetylnuraminic acid outer membrane channel protein1e-1687.4
CP002516:4199133:421092642109264211642717Escherichia coli KO11, complete genomeOligogalacturonate-specific porin1e-1687.4
NC_017328:4417000:442815144281514428876726Shigella flexneri 2002017 chromosome, complete genomeputative N-acetylneuraminic acid outer membrane channel protein nanC precursor1e-1687.4
NC_013941:5219841:523195852319585232683726Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein1e-1687.4
NC_000913:4528278:453680845368084537524717Escherichia coli K12, complete genomeN-acetylnuraminic acid outer membrane channel protein1e-1687.4
NC_010498:4930649:494341049434104944126717Escherichia coli SMS-3-5, complete genomeN-acetylneuraminic acid porin NanC1e-1687.4
NC_007946:4875997:490351849035184904243726Escherichia coli UTI89, complete genomehypothetical protein1e-1687.4
NC_008563:4905186:491974749197474920472726Escherichia coli APEC O1, complete genomehypothetical protein1e-1687.4
NC_016902:4199133:421092642109264211642717Escherichia coli KO11FL chromosome, complete genomeOligogalacturonate-specific porin1e-1687.4
NC_016822:4889656:490050649005064901222717Shigella sonnei 53G, complete genomeOligogalacturonate-specific porin1e-1687.4
NC_013364:5255700:526893352689335269649717Escherichia coli O111:H- str. 11128, complete genomeN-acetylnuraminic acid outer membrane channel protein1e-1687.4
NC_013353:5272863:529366252936625294378717Escherichia coli O103:H2 str. 12009, complete genomeN-acetylnuraminic acid outer membrane channel protein1e-1687.4
NC_013008:5411285:542340254234025424118717Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeN-acetylnuraminic acid outer membrane channel protein1e-1687.4
NC_012967:4510393:451892345189234519639717Escherichia coli B str. REL606 chromosome, complete genomeN-acetylnuraminic acid outer membrane channel protein1e-1687.4
NC_011601:4856717:487740948774094878125717Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeN-acetylnuraminic acid outer membrane channel protein1e-1687.4
NC_011741:4570498:459942945994294600145717Escherichia coli IAI1 chromosome, complete genomeN-acetylnuraminic acid outer membrane channel protein1e-1687.4
NC_011742:4873351:488160648816064882322717Escherichia coli S88 chromosome, complete genomeN-acetylnuraminic acid outer membrane channel protein1e-1687.4
NC_011745:5114500:512505351250535125769717Escherichia coli ED1a chromosome, complete genomeN-acetylnuraminic acid outer membrane channel protein1e-1687.4
NC_012759:4467288:447554344755434476259717Escherichia coli BW2952 chromosome, complete genomeN-acetylnuraminic acid outer membrane channel protein1e-1687.4
NC_012947:3883484:389446938944693895185717Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeoligogalacturonate-specific porin1e-1687.4
NC_013361:5580741:558730155873015588017717Escherichia coli O26:H11 str. 11368 chromosome, complete genomeN-acetylnuraminic acid outer membrane channel protein3e-1685.9
NC_011745:4862218:487319248731924873932741Escherichia coli ED1a chromosome, complete genomeputative N-acetylneuraminic acid outer membrane channel protein nanC5e-1685.5
NC_004431:3409389:347458534745853475325741Escherichia coli CFT073, complete genomeHypothetical protein yjhA precursor5e-1685.5
NC_011751:3453683:349769234976923498432741Escherichia coli UMN026 chromosome, complete genomeputative N-acetylneuraminic acid outer membrane channel protein nanC5e-1685.5
NC_004431:5123325:513350851335085134233726Escherichia coli CFT073, complete genomeHypothetical protein yjhA precursor5e-1685.1
NC_007613:4403070:441257144125714413296726Shigella boydii Sb227, complete genomehypothetical protein6e-1685.1
NC_009801:4882684:490101449010144901730717Escherichia coli E24377A, complete genomeoligogalacturonate-specific porin protein (KdgM)1e-1583.6
NC_011353:5455224:546734154673415467889549Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeoligogalacturonate-specific porin protein2e-1480.1
NC_004337:4374500:438588343858834386431549Shigella flexneri 2a str. 301, complete genomehypothetical protein2e-1480.1
NC_004741:4364235:437697943769794377527549Shigella flexneri 2a str. 2457T, complete genomehypothetical protein2e-1480.1
CP002797:4656327:466828746682874668835549Escherichia coli NA114, complete genomeN-acetylneuraminic acid outer membrane channel protein NanC2e-1480.1
NC_011080:4177443:418418441841844184876693Salmonella enterica subsp. enterica serovar Newport str. SL254,porin OmpL5e-1375.1
NC_010102:1979742:198669119866911987383693Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-0652.4
NC_006511:1770000:177696617769661777658693Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative secreted protein5e-0652
NC_003197:1207597:122066612206661221358693Salmonella typhimurium LT2, complete genomeputative outer membrane protein5e-0652
NC_006905:1186895:119996511999651200657693Salmonella enterica subsp. enterica serovar Choleraesuis strputative outer membrane protein5e-0652
NC_011083:1216500:122538212253821226074693Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,oligogalacturonate-specific porin5e-0652
NC_011080:1209935:122300612230061223698693Salmonella enterica subsp. enterica serovar Newport str. SL254,oligogalacturonate-specific porin5e-0652
NC_016831:1905289:191693819169381917630693Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein6e-0652
NC_011147:1763681:177214917721491772841693Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein5e-0652
NC_011274:1094379:110744311074431108135693Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein5e-0652
NC_016810:1163919:117698911769891177681693Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein5e-0652
NC_016856:1165941:117901111790111179703693Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative outer membrane protein5e-0652
NC_016857:1163919:117698911769891177681693Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative outer membrane protein5e-0652
NC_016860:1205282:121835212183521219044693Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein5e-0652
NC_016863:1165232:117830211783021178994693Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative outer membrane protein5e-0652
NC_017046:1164176:117724611772461177938693Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein5e-0652
NC_011294:1085447:109853010985301099222693Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein7e-0651.6