Pre_GI: BLASTP Hits

Some Help

Query: NC_015733:1793399:1797040 Pseudomonas putida S16 chromosome, complete genome

Start: 1797040, End: 1798278, Length: 1239

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016830:4295831:4300730430073043019741245Pseudomonas fluorescens F113 chromosome, complete genomeSbcD protein1e-171602
NC_009615:2039964:2047964204796420492141251Parabacteroides distasonis ATCC 8503 chromosome, complete genomeexonuclease6e-80298
NC_013855:558831:5634655634655647211257Azospirillum sp. B510 plasmid pAB510a, complete sequenceexonuclease7e-79294
NC_003228:3455405:3466286346628634675181233Bacteroides fragilis NCTC 9343, complete genomeputative exonuclease2e-71270
NC_016776:3485688:3497979349797934992111233Bacteroides fragilis 638R, complete genomeputative exonuclease1e-69264
NC_016002:1975000:1975143197514319763631221Pseudogulbenkiania sp. NH8B, complete genomenuclease SbcCD subunit D6e-49195
NC_016745:123772:1426571426571438741218Oceanimonas sp. GK1 chromosome, complete genomeexonuclease subunit SbcD2e-48193
NC_020054:2033982:2039168203916820404121245Fibrella aestuarina BUZ 2 drat genomeNuclease sbcCD subunit D5e-44179
NC_014972:3688000:3710991371099137122291239Desulfobulbus propionicus DSM 2032 chromosome, complete genomeExodeoxyribonuclease I subunit D1e-42174
NC_015497:1058980:1070053107005310714261374Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomenuclease SbcCD, D subunit3e-42172
NC_007484:755058:7550587550587563141257Nitrosococcus oceani ATCC 19707, complete genomeExonuclease SbcD7e-42171
NC_008740:637870:6501836501836514271245Marinobacter aquaeolei VT8, complete genomenuclease SbcCD, D subunit1e-41171
NC_015276:2552484:2556281255628125575251245Marinomonas mediterranea MMB-1 chromosome, complete genomenuclease SbcCD, D subunit2e-41170
NC_015510:8069440:8087692808769280889031212Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomenuclease SbcCD, D subunit2e-40166
NC_017328:335160:3631223631223643241203Shigella flexneri 2002017 chromosome, complete genomeATP-dependent dsDNA exonuclease6e-39162
NC_016111:409852:4337464337464349121167Streptomyces cattleya NRRL 8057, complete genomeexonuclease1e-32141
NC_017955:4746441:4750156475015647513041149Modestobacter marinus, complete genomeexonuclease I SbcCD, subunit D7e-33141
NC_015437:767572:7691057691057702681164Selenomonas sputigena ATCC 35185 chromosome, complete genomenuclease SbcCD, D subunit3e-31136
NC_011725:2206000:2223596222359622247531158Bacillus cereus B4264 chromosome, complete genomeexonuclease SbcD1e-29130
NC_014171:2177353:2195740219574021968971158Bacillus thuringiensis BMB171 chromosome, complete genomeexonuclease SbcD2e-29130
NC_011772:2166000:2183163218316321843201158Bacillus cereus G9842, complete genomeputative exonuclease SbcD3e-29129
NC_011658:2275864:2292651229265122938081158Bacillus cereus AH187 chromosome, complete genomeputative exonuclease SbcD1e-27124
NC_005957:2196000:2212820221282022139771158Bacillus thuringiensis serovar konkukian str. 97-27, completeexonuclease SbcD9e-28124
NC_007530:2175967:2193289219328921944461158Bacillus anthracis str. 'Ames Ancestor', complete genomeexonuclease sbcd, putative9e-28124
NC_003997:2175843:2193165219316521943221158Bacillus anthracis str. Ames, complete genomeexonuclease SbcD, putative9e-28124
NC_005945:2175871:2193271219327121944281158Bacillus anthracis str. Sterne, complete genomeexonuclease SbcD, putative9e-28124
NC_012659:2175867:2193189219318921943461158Bacillus anthracis str. A0248, complete genomeputative exonuclease SbcD9e-28124
NC_014335:2151404:2169456216945621706131158Bacillus cereus biovar anthracis str. CI chromosome, completeexonuclease SbcD9e-28124
NC_011773:2239753:2257119225711922582761158Bacillus cereus AH820 chromosome, complete genomeputative exonuclease SbcD9e-28124
NC_012472:2240000:2256926225692622580831158Bacillus cereus 03BB102, complete genomeputative exonuclease SbcD4e-27122
NC_015425:405058:4127734127734139901218Clostridium botulinum BKT015925 chromosome, complete genomeDNA repair exonuclease5e-26119
NC_016641:5528826:5538481553848155396651185Paenibacillus terrae HPL-003 chromosome, complete genomeexonuclease sbcD-like protein5e-26119
NC_017297:564727:5699975699975712261230Clostridium botulinum F str. 230613 chromosome, complete genomeputative nuclease SbcCD, D subunit3e-25116
NC_009699:564455:5697255697255709541230Clostridium botulinum F str. Langeland chromosome, complete genomenuclease SbcCD subunit D3e-25116
NC_012658:545840:5623705623705635991230Clostridium botulinum Ba4 str. 657 chromosome, complete genomeexonuclease SbcCD subunit D4e-25115
NC_013715:767722:7850337850337862621230Rothia mucilaginosa DY-18, complete genomeDNA repair exonuclease4e-25115
NC_014483:3498395:3505447350544735066311185Paenibacillus polymyxa E681 chromosome, complete genomeExonuclease sbcD-like protein6e-25115
NC_014622:3819495:3826114382611438272981185Paenibacillus polymyxa SC2 chromosome, complete genomeexonuclease SbcD7e-25115
NC_014328:2203437:2206440220644022076601221Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative exonuclease SbcD9e-25114
NC_010516:583870:5864315864315876601230Clostridium botulinum B1 str. Okra, complete genomeputative nuclease SbcCD, D subunit3e-24113
NC_009617:1165539:1171205117120511724341230Clostridium beijerinckii NCIMB 8052 chromosome, complete genomenuclease SbcCD subunit D1e-23111
NC_014633:339181:3408693408693420561188Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequencenuclease SbcCD subunit D3e-23110
NC_016630:1610723:1610723161072316118861164Filifactor alocis ATCC 35896 chromosome, complete genomeexonuclease SbcD4e-23109
NC_008261:225425:2516892516892529121224Clostridium perfringens ATCC 13124, complete genomeputative nuclease SbcCD, D subunit3e-22106
NC_003366:255480:2823132823132835361224Clostridium perfringens str. 13, complete genomeprobable exonuclease4e-22106
NC_008262:227354:2541462541462553691224Clostridium perfringens SM101, complete genomenuclease SbcCD, D subunit, putative4e-22106
NC_021171:1661923:1668941166894116700981158Bacillus sp. 1NLA3E, complete genomenuclease SbcCD subunit D9e-22105
NC_015500:2112975:2145056214505621463271272Treponema brennaborense DSM 12168 chromosome, complete genomenuclease SbcCD, D subunit1e-21104
NC_013521:107937:1282531282531294371185Sanguibacter keddieii DSM 10542, complete genomeExodeoxyribonuclease I subunit D1e-21104
NC_015172:1255956:1259800125980012609751176Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomenuclease SbcCD, D subunit3e-1893.2
NC_015578:3561838:3583428358342835846931266Treponema primitia ZAS-2 chromosome, complete genomeDNA repair exonuclease, SbcD4e-1892.8
NC_013730:7118798:7139979713997971412051227Spirosoma linguale DSM 74, complete genomenuclease SbcCD, D subunit1e-1791.7
NC_014554:1339566:1351059135105913522401182Lactobacillus plantarum subsp. plantarum ST-III chromosome,exonuclease SbcD3e-1686.7
NC_015975:441580:4415804415804427071128Lactobacillus ruminis ATCC 27782 chromosome, complete genomenuclease SbcCD, D subunit2e-1584.3
NC_015587:981808:1001149100114910022911143Hydrogenobaculum sp. SHO chromosome, complete genomenuclease SbcCD, D subunit3e-1583.2
NC_020411:981888:1001226100122610023681143Hydrogenobaculum sp. HO, complete genomeExodeoxyribonuclease I subunit D3e-1583.2
NC_015557:981698:1001037100103710021791143Hydrogenobaculum sp. 3684 chromosome, complete genomenuclease SbcCD, D subunit3e-1583.2
NC_011126:992994:1012323101232310134651143Hydrogenobaculum sp. Y04AAS1, complete genomenuclease SbcCD, D subunit2e-1480.5
NC_010612:4400260:4420224442022444214561233Mycobacterium marinum M, complete genomeDNA repair exonuclease1e-1171.2
NC_015930:821342:8257558257558269271173Lactococcus garvieae ATCC 49156, complete genomeexonuclease SbcD2e-1170.9
NC_019904:2010999:2010999201099920122281230Echinicola vietnamensis DSM 17526 chromosome, complete genomeexonuclease SbcD1e-0965.1