Pre_GI Gene

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Host: NC_016776 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016776:3485688 Bacteroides fragilis 638R, complete genome

Host Lineage: Bacteroides fragilis; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This group of microbes constitute the most abundant members of the intestinal microflora of mammals. Typically they are symbionts, but they can become opportunistic pathogens in the peritoneal (intra-abdominal) cavity. Breakdown of complex plant polysaccharides such as cellulose and hemicellulose and host-derived polysaccharides such as mucopolysaccharides is aided by the many enzymes these organisms produce. Although only a minor component of the human gut microflora, this organism is a major component of clinical specimens and is the most common anaerobe isolated.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
348568834868241137putative lipoproteinQuickGO ontology
34869053487105201hypothetical protein
34871163487544429hypothetical proteinBLASTP
34876123488094483hypothetical proteinBLASTP
34883833488895513putative RNA polymerase sigma factorQuickGO ontologyBLASTP
34888993489483585hypothetical proteinBLASTP
348959634907621167hypothetical proteinBLASTP
349075934924831725putative ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
349248634942521767putative ABC transport system membrane proteinQuickGO ontologyBLASTP
349486534978282964putative exonucleaseQuickGO ontologyBLASTP
349797934992111233putative exonucleaseQuickGO ontologyBLASTP
34992103500058849putative phospholipids biosynthesis-related proteinQuickGO ontologyBLASTP
350018935034133225putative ABC transport system membrane proteinQuickGO ontologyBLASTP
350341335049061494putative ABC transport system exported proteinQuickGO ontologyBLASTP
350490935079863078putative ABC transport system membrane proteinQuickGO ontologyBLASTP