Pre_GI: BLASTP Hits

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Query: NC_014624:287500:304428 Eubacterium limosum KIST612 chromosome, complete genome

Start: 304428, End: 305174, Length: 747

Host Lineage: Eubacterium limosum; Eubacterium; Eubacteriaceae; Clostridiales; Firmicutes; Bacteria

General Information: Eubacterium limosum KIST612 is an acetogenic bacterium isolated from an anaerobic digester and has a high growth rate on synthesis gas (CO; carbon monoxide) using it as a sole energy source. This organism produces acetate as well as butyrate and ethanol as fermentation products from syngas. Therefore, E. limosum KIST612 has been considered for a model strain for bioenergy production from syngas (obtained from biomass).




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007907:2249607:225088322508832251608726Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-31135
NC_014376:2921769:293831329383132939053741Clostridium saccharolyticum WM1 chromosome, complete genometwo component transcriptional regulator, LytTR family2e-29129
NC_016627:1485799:149181114918111492536726Clostridium clariflavum DSM 19732 chromosome, complete genomeresponse regulator of the LytR/AlgR family4e-29128
NC_018704:2417902:242905824290582429768711Amphibacillus xylanus NBRC 15112, complete genomeputative two-component system response regulator3e-25115
NC_009089:1283000:128229312822931283006714Clostridium difficile 630, complete genometwo-component response regulator5e-25114
NC_011898:3159411:319241031924103193168759Clostridium cellulolyticum H10, complete genometwo component transcriptional regulator, LytTR family3e-24112
NC_016894:77853:840308403084764735Acetobacterium woodii DSM 1030 chromosome, complete genometwo component transcriptional regulator1e-22107
NC_016048:308342:328892328892329599708Oscillibacter valericigenes Sjm18-20, complete genomeputative two-component response regulator4e-22105
NC_014363:1973670:198281319828131983520708Olsenella uli DSM 7084 chromosome, complete genometwo component transcriptional regulator, LytTR family1e-1893.6
NC_009922:42696:456394563946355717Alkaliphilus oremlandii OhILAs, complete genometwo component transcriptional regulator, LytTR family1e-1790.1
NC_015172:850802:866232866232866960729Syntrophobotulus glycolicus DSM 8271 chromosome, complete genometwo component transcriptional regulator, LytTR family5e-1788.2
NC_014614:608946:611958611958612692735Clostridium sticklandii, complete genomehypothetical protein4e-1685.5
NC_014387:281157:282005282005282703699Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeLytTR/response regulator domain-containing protein1e-1583.6
NC_010520:1146000:116684911668491167565717Clostridium botulinum A3 str. Loch Maree, complete genomeLytTr DNA-binding domain family1e-1583.6
NC_014376:1842290:186064418606441861369726Clostridium saccharolyticum WM1 chromosome, complete genometwo component transcriptional regulator, LytTR family4e-1582
NC_015275:3407358:342575034257503426475726Clostridium lentocellum DSM 5427 chromosome, complete genometwo component transcriptional regulator, LytTR family1e-1480.1
NC_013174:501326:500595500595501329735Jonesia denitrificans DSM 20603, complete genometwo component transcriptional regulator, LytTR family3e-1479
NC_009616:99647:116610116610117290681Thermosipho melanesiensis BI429 chromosome, complete genomeLytTR family two component transcriptional regulator4e-1478.6
NC_007333:3360000:336380033638003364594795Thermobifida fusca YX, complete genomeresponse regulator receiver1e-1376.6
NC_015690:8614000:862677486267748627514741Paenibacillus mucilaginosus KNP414 chromosome, complete genometwo-component response regulator1e-1376.6
NC_014376:3796990:380806238080623808787726Clostridium saccharolyticum WM1 chromosome, complete genometwo component transcriptional regulator, LytTR family2e-1375.9
NC_016048:375676:399488399488400183696Oscillibacter valericigenes Sjm18-20, complete genomeputative two-component response regulator3e-1375.9
NC_008261:576923:593925593925594641717Clostridium perfringens ATCC 13124, complete genomeDNA-binding response regulator6e-1374.3
NC_012778:207415:217309217309218022714Eubacterium eligens ATCC 27750, complete genometwo-component system, LytT family, response regulator7e-1374.3
NC_015977:3424178:347917734791773479884708Roseburia hominis A2-183 chromosome, complete genomeresponse regulator of the lytr/algr family protein1e-1273.6
NC_014616:54500:567695676957485717Bifidobacterium bifidum S17 chromosome, complete genometwo-component response regulator3e-1272
NC_009792:642881:644563644563645282720Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-1169.3
NC_016776:3798108:379737437973743798111738Bacteroides fragilis 638R, complete genomeputative two-component system, response regulator3e-1168.9
NC_006347:3843228:384459438445943845331738Bacteroides fragilis YCH46, complete genometwo-component system response regulator3e-1168.9
NC_006347:2190000:219573921957392196437699Bacteroides fragilis YCH46, complete genometwo-component system response regulator7e-1167.8
NC_003228:2245181:225199322519932252691699Bacteroides fragilis NCTC 9343, complete genomeputative two-component system response regulator7e-1167.8
NC_016776:2237404:224442922444292245127699Bacteroides fragilis 638R, complete genomeputative two-component system response regulator7e-1167.8
NC_003228:3752035:375130137513013752038738Bacteroides fragilis NCTC 9343, complete genomeputative two-component system, response regulator9e-1167.4
NC_014152:2849991:286797228679722868697726Thermincola sp. JR, complete genometwo component transcriptional regulator, LytTR family1e-1067
NC_013037:5442131:545847354584735459195723Dyadobacter fermentans DSM 18053, complete genometwo component transcriptional regulator, LytTR family2e-1066.2
NC_013008:2889743:288902728890272889746720Escherichia coli O157:H7 str. TW14359 chromosome, complete genometwo-component response-regulatory protein YehT2e-1066.2
NC_002695:2893951:289323528932352893954720Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-1066.2
NC_011750:919953:938353938353939072720Escherichia coli IAI39 chromosome, complete genomeputative two-component response-regulatory protein YehT3e-1065.9
NC_018721:2872780:287278028727802873505726Psychroflexus torquis ATCC 700755 chromosome, complete genometwo-component system response regulator, LytR/AlgR family3e-1065.5
NC_014219:999648:99964899964810007811134Bacillus selenitireducens MLS10 chromosome, complete genomeresponse regulator receiver and SARP domain protein6e-1064.7
NC_004663:1499145:151426015142601514958699Bacteroides thetaiotaomicron VPI-5482, complete genometwo-component system response regulator7e-1064.3
NC_009828:600349:601856601856602527672Thermotoga lettingae TMO, complete genometwo component transcriptional regulator, LytTR family8e-1064.3
NC_013316:2033906:207459320745932075183591Clostridium difficile R20291, complete genomehypothetical protein9e-1063.9
NC_019968:1084288:112808911280891128805717Prevotella dentalis DSM 3688 chromosome 2, complete sequenceresponse regulator of the LytR/AlgR family2e-0963.2
NC_019968:1304450:131481713148171315533717Prevotella dentalis DSM 3688 chromosome 2, complete sequenceresponse regulator of the LytR/AlgR family2e-0963.2
NC_016940:470163:502234502234502953720Saprospira grandis str. Lewin chromosome, complete genometwo component transcriptional regulator, LytTR family protein2e-0963.2
NC_006510:1501487:152070415207041521444741Geobacillus kaustophilus HTA426, complete genometranscriptional regulator2e-0962.8
NC_014624:3316916:332634833263483326935588Eubacterium limosum KIST612 chromosome, complete genomeLytTR family two component transcriptional regulator2e-0962.8
NC_014633:583858:604072604072604797726Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceLytTR family two component transcriptional regulator4e-0961.6
NC_015510:1234500:125002412500241250725702Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeLytTR family two component transcriptional regulator1e-0860.5
NC_015977:3424178:347591234759123476646735Roseburia hominis A2-183 chromosome, complete genometwo-component system response regulator protein1e-0860.1
NC_016609:2951301:298003529800352980781747Niastella koreensis GR20-10 chromosome, complete genomeLytTR family two component transcriptional regulator1e-0860.1
NC_007644:1638083:165823516582351658972738Moorella thermoacetica ATCC 39073, complete genometranscriptional regulator, LytR/AlgR family2e-0859.7
NC_015510:1234500:125508212550821255795714Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeLytTR family two component transcriptional regulator2e-0859.3
NC_012984:3077004:308966030896603090403744Lactobacillus plantarum JDM1, complete genomeresponse regulator; accesory gene regulator protein A5e-0858.5
NC_014828:943911:9567489567489578541107Ethanoligenens harbinense YUAN-3 chromosome, complete genomeresponse regulator receiver and SARP domain protein5e-0858.2
NC_015589:2281054:228878522887852289513729Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeLytTr DNA-binding protein6e-0857.8
NC_020272:3187482:3201383320138332024591077Bacillus amyloliquefaciens IT-45, complete genomeresponse regulator MprA7e-0857.8
NC_020260:1111130:112837811283781129103726Cronobacter sakazakii Sp291, complete genometwo-component response-regulatory protein YehT2e-0756.2
NC_009778:1070000:108629010862901087015726Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-0756.2
NC_020209:4768500:479928447992844800006723Pseudomonas poae RE*1-1-14, complete genomeputative two-component system response regulator2e-0755.8
NC_012918:2277500:2300001230000123013741374Geobacter sp. M21 chromosome, complete genomeFis family transcriptional regulator3e-0755.8
NC_014393:1421122:1427612142761214287121101Clostridium cellulovorans 743B chromosome, complete genomeresponse regulator receiver and SARP domain-containing protein3e-0755.5
NC_010658:2529033:255507825550782555812735Shigella boydii CDC 3083-94, complete genomeresponse regulator3e-0755.5
NC_008258:2473000:249696424969642497698735Shigella flexneri 5 str. 8401, complete genomeputative 2-component transcriptional regulator3e-0755.5
NC_004337:2478461:250322425032242503958735Shigella flexneri 2a str. 301, complete genomeputative 2-component transcriptional regulator3e-0755.5
CP002516:1419413:142028314202831421017735Escherichia coli KO11, complete genometwo component transcriptional regulator, LytTR family3e-0755.5
NC_013941:2928000:296958729695872970321735Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein3e-0755.5
NC_016822:2678691:270562327056232706357735Shigella sonnei 53G, complete genomeLytTR family two component transcriptional regulator3e-0755.5
NC_016902:1419413:142028314202831421017735Escherichia coli KO11FL chromosome, complete genomeLytTR family two component transcriptional regulator3e-0755.5
NC_020209:1903830:1908745190874519099381194Pseudomonas poae RE*1-1-14, complete genomeputative two-component system response regulator4e-0755.1
NC_010718:2265447:226544722654472266163717Natranaerobius thermophilus JW/NM-WN-LF, complete genometwo component transcriptional regulator, LytTR family5e-0755.1
NC_017316:2581781:259771425977142598442729Enterococcus faecalis OG1RF chromosome, complete genomeresponse regulator6e-0754.7
NC_015144:693958:697410697410698108699Weeksella virosa DSM 16922 chromosome, complete genometwo component transcriptional regulator, winged helix family6e-0754.7
NC_004668:3053119:306801830680183068746729Enterococcus faecalis V583, complete genomeresponse regulator7e-0754.3
NC_018691:2410779:242736024273602427854495Alcanivorax dieselolei B5 chromosome, complete genomeSensory box protein/response regulator9e-0753.9
NC_014206:1694330:172848917284891729271783Geobacillus sp. C56-T3 chromosome, complete genomeAraC family transcriptional regulator1e-0653.5
NC_008313:886248:9036189036189047901173Ralstonia eutropha H16 chromosome 1, complete sequenceresponse regulator containing an adenylate cyclase effector domain2e-0653.1
NC_010520:3580000:359767035976703598434765Clostridium botulinum A3 str. Loch Maree, complete genomeDNA-binding response regulator, LytTr family2e-0652.8
NC_012563:3729817:376253737625373763301765Clostridium botulinum A2 str. Kyoto, complete genomeDNA-binding response regulator, LytTr family3e-0652.4
NC_015703:2693463:270975827097582710495738Runella slithyformis DSM 19594 chromosome, complete genomeLytTR family two component transcriptional regulator3e-0652.4
NC_009699:3581376:361409836140983614862765Clostridium botulinum F str. Langeland chromosome, complete genomeLytTr family DNA-binding response regulator3e-0652.4
NC_017297:3594000:361271236127123613476765Clostridium botulinum F str. 230613 chromosome, complete genomeDNA-binding response regulator, LytTr family3e-0652.4
NC_020409:393329:4195054195054216432139Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeResponse regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S)3e-0652.4
NC_012559:854507:856232856232856972741Laribacter hongkongensis HLHK9, complete genomeTwo-component transcriptional regulator, winged helix family3e-0652.4
NC_009495:3502000:352046735204673521231765Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeDNA-binding response regulator, LytTr family3e-0652.4
NC_009697:3463736:349645534964553497219765Clostridium botulinum A str. ATCC 19397 chromosome, completeLytTr family DNA-binding response regulator3e-0652.4
NC_007963:1190847:119905911990591199751693Chromohalobacter salexigens DSM 3043, complete genometwo component transcriptional regulator, winged helix family3e-0652
NC_012917:3565268:357072135707213571437717Pectobacterium carotovorum subsp. carotovorum PC1, complete genometwo component transcriptional regulator, LytTR family4e-0652
NC_008261:1249595:1267397126739712689171521Clostridium perfringens ATCC 13124, complete genometranscriptional regulator, AraC family4e-0652
NC_013406:347995:347995347995348765771Paenibacillus sp. Y412MC10 chromosome, complete genomeresponse regulator receiver and SARP domain-containing protein5e-0651.6
NC_009850:413093:419654419654420031378Arcobacter butzleri RM4018, complete genometwo-component response regulator5e-0651.6
NC_009617:648000:666775666775667533759Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeLytTR family two component transcriptional regulator6e-0651.2
NC_017187:387735:397295397295397672378Arcobacter butzleri ED-1, complete genometwo-component response regulator7e-0651.2
NC_018515:1406816:141371214137121414566855Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeresponse regulator containing CheY-like receiver and SARP domains7e-0651.2
NC_016940:3632974:364826436482643648971708Saprospira grandis str. Lewin chromosome, complete genometwo component transcriptional regulator, winged helix family protein8e-0650.8
NC_010424:697187:7118287118287128591032Candidatus Desulforudis audaxviator MP104C, complete genomeresponse regulator receiver modulated metal dependent phosphohydrolase8e-0650.8
NC_014219:999648:1007214100721410083561143Bacillus selenitireducens MLS10 chromosome, complete genomeresponse regulator receiver and SARP domain protein1e-0550.4