Pre_GI: BLASTP Hits

Some Help

Query: NC_013198:394000:434488 Lactobacillus rhamnosus GG, complete genome

Start: 434488, End: 435621, Length: 1134

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016771:4569941:4576131457613145772371107Bacillus cereus NC7401, complete genomeN-acylamino acid racemase6e-91334
NC_011658:4616933:4622366462236646234721107Bacillus cereus AH187 chromosome, complete genomeN-acylamino acid racemase6e-91334
NC_003909:4614789:4620609462060946217151107Bacillus cereus ATCC 10987, complete genomeN-acylamino acid racemase1e-90333
NC_014335:4566692:4574000457400045751061107Bacillus cereus biovar anthracis str. CI chromosome, completeo-succinylbenzoate-CoA synthase2e-90332
NC_008600:4626464:4638640463864046397461107Bacillus thuringiensis str. Al Hakam, complete genomeo-succinylbenzoate synthase2e-90332
NC_011725:4799905:4806860480686048079661107Bacillus cereus B4264 chromosome, complete genomeN-acylamino acid racemase3e-90332
NC_016779:4588000:4596265459626545973711107Bacillus cereus F837/76 chromosome, complete genomeO-succinylbenzoate-CoA synthase3e-90332
NC_012472:4630485:4642576464257646436821107Bacillus cereus 03BB102, complete genomeN-acylamino acid racemase5e-90331
NC_012880:3748665:3786817378681737879291113Dickeya dadantii Ech703, complete genomeMandelate racemase/muconate lactonizing protein4e-90331
NC_017200:4632000:4648033464803346491391107Bacillus thuringiensis serovar finitimus YBT-020 chromosome,enolase superfamily protein; N-acylamino acid racemase, mandelate racemase/muconate lactonizing enzyme, or2e-89329
NC_011772:4763542:4776089477608947771951107Bacillus cereus G9842, complete genomeN-acylamino acid racemase3e-89328
NC_014171:4681822:4689194468919446903001107Bacillus thuringiensis BMB171 chromosome, complete genomemandelate racemase/muconate lactonizing family protein2e-87323
NC_011969:4556296:4564242456424245653121071Bacillus cereus Q1 chromosome, complete genomen-acylamino acid racemase; o-succinylbenzoate synthase5e-86318
NC_014958:3393855:3396376339637633974821107Deinococcus maricopensis DSM 21211 chromosome, complete genomeo-succinylbenzoic acid (OSB) synthetase3e-75282
NC_017093:3777178:3783389378338937844891101Actinoplanes missouriensis 431, complete genomeputative mandelate racemase/muconate lactonizing enzyme-like protein3e-72272
NC_019791:570923:5709235709235720561134Caldisphaera lagunensis DSM 15908 chromosome, complete genomeo-succinylbenzoic acid synthetase3e-69262
NC_009033:791515:7970957970957982101116Staphylothermus marinus F1, complete genomeMandelate racemase/muconate lactonizing enzyme, C-terminal domain protein4e-69261
NC_021182:2013500:2014892201489220160011110Clostridium pasteurianum BC1, complete genomeo-succinylbenzoic acid synthetase5e-57221
NC_013510:3065000:3069784306978430708391056Thermomonospora curvata DSM 43183, complete genomeMandelate racemase/muconate lactonizing protein6e-40165
NC_017068:1327025:1330760133076013318511092Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative chloromuconate cycloisomerase1e-28127
NC_014376:693820:7121477121477132501104Clostridium saccharolyticum WM1 chromosome, complete genomeMandelate racemase/muconate lactonizing protein6e-26118
NC_003454:63500:9750597505986321128Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeO-succinylbenzoate-CoA synthase5e-25115
NC_015136:2282488:2321268232126823224281161Burkholderia sp. CCGE1001 chromosome 1, complete sequencemandelate racemase/muconate lactonizing protein4e-24112
NC_015873:238187:2559092559092570031095Megasphaera elsdenii DSM 20460, complete genomemandelate racemase/muconate lactonizing enzyme5e-23108
NC_014614:260782:2744012744012755041104Clostridium sticklandii, complete genomeputative muconate cycloisomerase1e-22107
NC_016023:1658377:1660267166026716613311065Bacillus coagulans 36D1 chromosome, complete genomemandelate racemase/muconate lactonizing protein2e-21103
NC_013741:1196997:1199986119998612010651080Archaeoglobus profundus DSM 5631, complete genomeMandelate racemase/muconate lactonizing protein7e-21101
NC_012673:77610:9578795787969171131Exiguobacterium sp. AT1b, complete genomeMandelate racemase/muconate lactonizing protein3e-2099.4
NC_002678:6061448:6084562608456260856651104Mesorhizobium loti MAFF303099, complete genomemuconate lactonizing enzyme1e-1997.8
NC_020181:969599:970208970208971173966Enterobacter aerogenes EA1509E, complete genomeL-alanine-DL-glutamate epimerase3e-1996.3
NC_015663:4447984:446593144659314466896966Enterobacter aerogenes KCTC 2190 chromosome, complete genomeL-Ala-D/L-Glu epimerase3e-1996.3
NC_010676:2720068:2731170273117027323031134Burkholderia phytofirmans PsJN chromosome 2, complete sequenceMandelate racemase/muconate lactonizing protein8e-1995.1
NC_015954:1222776:1224258122425812253011044Halophilic archaeon DL31 chromosome, complete genomeMandelate racemase/muconate lactonizing protein2e-1893.2
NC_007948:4646344:4647276464727646484571182Polaromonas sp. JS666, complete genomemandelate racemase/muconate lactonizing enzyme4e-1892.8
NC_013966:399215:4359574359574370121056Haloferax volcanii DS2 plasmid pHV4, complete sequencemandelate racemase / muconate lactonizing enzyme homolog1e-1790.9
NC_011094:1726000:174767817476781748643966Salmonella enterica subsp. enterica serovar Schwarzengrund strmandelate racemase / muconate lactonizing enzyme, N- domain-containing protein2e-1790.5
NC_021066:1778000:179252217925221793487966Raoultella ornithinolytica B6, complete genomeL-Ala-D/L-Glu epimerase2e-1790.5
NC_011080:1750000:177085917708591771824966Salmonella enterica subsp. enterica serovar Newport str. SL254,mandelate racemase / muconate lactonizing enzyme, N- domain protein2e-1790.5
NC_006905:1766000:178763717876371788602966Salmonella enterica subsp. enterica serovar Choleraesuis strputative chloromuconate cycloisomerase (muconate cycloisomerase)2e-1790.5
NC_003197:1753663:177450317745031775468966Salmonella typhimurium LT2, complete genomeputative chloromuconate cycloisomerase2e-1790.5
NC_016810:1709695:173135717313571732322966Salmonella enterica subsp. enterica serovar Typhimurium strputative mandelate racemase / muconate lactonizing enzyme family protein2e-1790.5
NC_016856:1763640:178448117844811785446966Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative chloromuconate cycloisomerase2e-1790.5
NC_016857:1709695:173135717313571732322966Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74L-Ala-D/L-Glu epimerase2e-1790.5
NC_016860:1752000:177219417721941773159966Salmonella enterica subsp. enterica serovar Typhimurium strputative chloromuconate cycloisomerase2e-1790.5
NC_016863:1711832:173267317326731733638966Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative chloromuconate cycloisomerase2e-1790.5
NC_017046:1709578:173124017312401732205966Salmonella enterica subsp. enterica serovar Typhimurium str. 798mandelate racemase / muconate lactonizing enzyme family protein2e-1790.5
NC_012731:2261787:2263456226345622644841029Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeL-Ala-D/L-Glu epimerase2e-1790.5
NC_015151:665346:6873766873766884791104Vulcanisaeta moutnovskia 768-28 chromosome, complete genomemandelate racemase/muconate lactonizing enzyme, C-terminal domain protein3e-1789.7
NC_004631:1623511:164518116451811646146966Salmonella enterica subsp. enterica serovar Typhi Ty2, completemuconate lactonizing enzyme family protein4e-1789.4
NC_013923:45876:4479744797458791083Natrialba magadii ATCC 43099 plasmid pNMAG01, complete sequenceMandelate racemase/muconate lactonizing protein5e-1789.4
NC_020209:1949500:1971604197160419727311128Pseudomonas poae RE*1-1-14, complete genomemuconate cycloisomerase 16e-1789
NC_014923:5940500:5959999595999959611051107Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeMandelate racemase/muconate lactonizing protein5e-1789
NC_019973:5869500:5888959588895958900651107Mesorhizobium australicum WSM2073, complete genomeenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase5e-1789
NC_015675:6493444:6514670651467065157761107Mesorhizobium opportunistum WSM2075 chromosome, complete genomemandelate racemase/muconate lactonizing protein5e-1789
NC_003911:3864852:3869173386917338703031131Silicibacter pomeroyi DSS-3, complete genomemuconate cycloisomerase I9e-1788.2
NC_008800:2298000:231396723139672314938972Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative mandelate racemase/muconate lactonizing protein1e-1687.8
NC_014541:643604:6616346616346627551122Ferrimonas balearica DSM 9799 chromosome, complete genomeMandelate racemase/muconate lactonizing protein1e-1687.8
NC_011740:1494796:1510509151050915117171209Escherichia fergusonii ATCC 35469, complete genomeputative mandelate racemase2e-1687
NC_010170:1580832:1582665158266515837771113Bordetella petrii, complete genomemuconate cycloisomerase I9e-1684.7
NC_007951:3631772:3651060365106036521721113Burkholderia xenovorans LB400 chromosome 1, complete sequenceChloromuconate cycloisomerase9e-1684.7
NC_015312:3290887:3303947330394733050681122Pseudonocardia dioxanivorans CB1190 chromosome, complete genomemuconate and chloromuconate cycloisomerase1e-1584.3
NC_014500:564864:5660205660205673661347Dickeya dadantii 3937 chromosome, complete genomemandelate racemase/muconate lactonizing enzyme family protein2e-1583.6
NC_009792:1345500:135720813572081358173966Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein4e-1582.8
NC_010515:1375091:1402457140245714036381182Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceMandelate racemase/muconate lactonizing protein4e-1582.4
NC_007181:1766910:1776768177676817778861119Sulfolobus acidocaldarius DSM 639, complete genomemandelate racemase/muconate lactonizing enzyme2e-1480.5
NC_014118:1592000:1610405161040516115771173Burkholderia sp. CCGE1002 chromosome chromosome 2, completeMandelate racemase/muconate lactonizing protein4e-1479.3
NC_011740:1494796:1516005151600515172071203Escherichia fergusonii ATCC 35469, complete genomeMuconate cycloisomerase I (Cis,cis-muconate lactonizing enzyme I) (MLE)5e-1479
NC_008786:2573558:2577007257700725781161110Verminephrobacter eiseniae EF01-2, complete genomeMandelate racemase/muconate lactonizing enzyme, C-terminal domain protein1e-1377.8
NC_012521:148886:1544261544261554301005Rhodococcus opacus B4 plasmid pROB02, complete sequenceputative dipeptide epimerase1e-1377.4
NC_008699:857837:8769608769608780631104Nocardioides sp. JS614, complete genomeMandelate racemase/muconate lactonizing enzyme, N-terminal domain protein3e-1376.6
NC_012588:742000:7617737617737628851113Sulfolobus islandicus M.14.25 chromosome, complete genomemandelate racemase/muconate lactonizing protein3e-1376.3
NC_014841:131308:1493361493361504481113Pantoea sp. At-9b plasmid pPAT9B04, complete sequenceMandelate racemase/muconate lactonizing protein4e-1376.3
NC_014641:20103:2290822908240201113Achromobacter xylosoxidans A8 plasmid pA81, complete sequencechloromuconate cycloisomerase5e-1375.9
NC_010170:3944228:3958433395843339595451113Bordetella petrii, complete genomeChloromuconate cycloisomerase5e-1375.9
NC_003888:3817000:3843523384352338446081086Streptomyces coelicolor A3(2), complete genomeracemase5e-1375.5
NC_011002:564654:5676085676085687441137Burkholderia cenocepacia J2315 chromosome 3, complete sequencemuconate cycloisomerase I 26e-1375.5
NC_002947:4167500:4237124423712442382451122Pseudomonas putida KT2440, complete genomemuconate cycloisomerase2e-1273.9
NC_012917:3241196:324279132427913243771981Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeMandelate racemase/muconate lactonizing protein2e-1273.6
NC_017986:5833819:5837087583708758382201134Pseudomonas putida ND6 chromosome, complete genomeCatB3e-1273.2
NC_008025:1768756:1785150178515017862381089Deinococcus geothermalis DSM 11300, complete genomeMandelate racemase/muconate lactonizing enzyme-like protein3e-1273.2
NC_015968:3053565:3058766305876630599201155Enterobacter asburiae LF7a chromosome, complete genomeMandelate racemase/muconate lactonizing protein4e-1272.8
NC_009379:435404:4563424563424574751134Polynucleobacter sp. QLW-P1DMWA-1, complete genomeMandelate racemase/muconate lactonizing enzyme, C-terminal domain protein7e-1272
NC_020126:7255111:726127972612797262265987Myxococcus stipitatus DSM 14675, complete genomemandelate racemase/muconate lactonizing enzyme family protein2e-1170.9
NC_007492:3384077:3399964339996434010851122Pseudomonas fluorescens PfO-1, complete genomeMandelate racemase/muconate lactonizing enzyme5e-1169.3
NC_017082:6444522:6446279644627964473701092Bradyrhizobium sp. S23321, complete genomemandelate racemase5e-1168.9
NC_007337:10464:3120931209324111203Ralstonia eutropha JMP134 plasmid 1, complete sequenceMuconate cycloisomerase7e-1168.6
NC_013757:1343396:1359369135936913604721104Geodermatophilus obscurus DSM 43160, complete genomeMandelate racemase/muconate lactonizing protein7e-1168.6
NC_007948:517893:5355515355515366451095Polaromonas sp. JS666, complete genomemandelate racemase/muconate lactonizing enzyme1e-1067.8
NC_011959:1965158:1974154197415419753261173Thermomicrobium roseum DSM 5159, complete genome2-oxo-3-deoxygalactonate 6-phosphate aldolase and galactonate dehydratase1e-1067.8
NC_007963:3553678:3562167356216735633391173Chromohalobacter salexigens DSM 3043, complete genomemandelate racemase/muconate lactonizing enzyme1e-1067.8
NC_009614:3081190:3101570310157031026251056Bacteroides vulgatus ATCC 8482 chromosome, complete genomemuconate cycloisomerase1e-1067.8
NC_011001:63986:7781177811789891179Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative mandelate racemase/muconate lactonizing enzyme2e-1067.4
NC_003911:2540453:2565441256544125666101170Silicibacter pomeroyi DSS-3, complete genomemandelate racemase/muconate lactonizing enzyme family protein2e-1067.4
NC_005877:509877:5132215132215143961176Picrophilus torridus DSM 9790, complete genomegluconate/galactonate dehydratase4e-1066.2
NC_010552:592154:6173636173636184961134Burkholderia ambifaria MC40-6 chromosome 2, complete sequencemuconate and chloromuconate cycloisomerase4e-1066.2
NC_009718:1771500:1784423178442317854511029Fervidobacterium nodosum Rt17-B1, complete genomemandelate racemase/muconate lactonizing protein4e-1066.2
NC_013355:105500:119119119119120114996Zymomonas mobilis subsp. mobilis NCIB 11163, complete genomeMandelate racemase/muconate lactonizing protein8e-1065.1
NC_018145:104303:117991117991118986996Zymomonas mobilis subsp. mobilis ATCC 29191 chromosome, completemandelate racemase/muconate lactonizing protein8e-1065.1
NC_011959:1965158:1975415197541519766771263Thermomicrobium roseum DSM 5159, complete genomemandelate racemase/muconate lactonizing enzyme:Mandelate racemase/muconate lactonizing enzyme8e-1065.1
NC_014973:3690371:3723736372373637248451110Geobacter sp. M18 chromosome, complete genomeMandelate racemase/muconate lactonizing protein1e-0964.7
NC_014119:977136:9923849923849936731290Burkholderia sp. CCGE1002 chromosome chromosome 3, completeMandelate racemase/muconate lactonizing protein1e-0964.7
NC_015556:4118304:4141558414155841427121155Pseudomonas fulva 12-X chromosome, complete genomeMandelate racemase/muconate lactonizing protein1e-0964.7
NC_013740:2218215:2231462223146222326251164Acidaminococcus fermentans DSM 20731, complete genomeMandelate racemase/muconate lactonizing protein1e-0964.3
NC_009664:4696961:4757316475731647584161101Kineococcus radiotolerans SRS30216, complete genomeMandelate racemase/muconate lactonizing protein1e-0964.3
NC_012850:3454270:3455189345518934563341146Rhizobium leguminosarum bv. trifolii WSM1325, complete genomeMandelate racemase/muconate lactonizing protein2e-0963.9
NC_018643:807405:8227418227418238441104Alpha proteobacterium HIMB5 chromosome, complete genomemandelate racemase family protein,mandelate racemase family protein3e-0963.2
NC_007948:4558000:4596945459694545981051161Polaromonas sp. JS666, complete genomemandelate racemase/muconate lactonizing enzyme4e-0962.8
NC_012623:2004786:2009055200905520101731119Sulfolobus islandicus Y.N.15.51 chromosome, complete genomemandelate racemase/muconate lactonizing protein6e-0962.4
NC_007948:4646344:4658443465844346595701128Polaromonas sp. JS666, complete genomemandelate racemase/muconate lactonizing enzyme7e-0962
NC_012632:538967:5428355428355439531119Sulfolobus islandicus M.16.27 chromosome, complete genomemandelate racemase/muconate lactonizing protein7e-0962
NC_015635:811500:8341248341248354251302Microlunatus phosphovorus NM-1, complete genomedehydratase8e-0961.6
NC_004193:2921103:2926661292666129278361176Oceanobacillus iheyensis HTE831, complete genomemuconate cycloisomerase9e-0961.6
NC_003228:3212500:3220355322035532213711017Bacteroides fragilis NCTC 9343, complete genomeputative muconate cycloisomerase1e-0861.2
NC_013158:363222:3863923863923874201029Halorhabdus utahensis DSM 12940, complete genomeMandelate racemase/muconate lactonizing protein3e-0859.7
NC_014306:2518996:2518996251899625202491254Erwinia billingiae Eb661, complete genomeGalactonate dehydratase4e-0859.3
NC_013440:8405719:8426347842634784273691023Haliangium ochraceum DSM 14365, complete genomeMandelate racemase/muconate lactonizing protein6e-0858.9
NC_007337:10464:2166921669227811113Ralstonia eutropha JMP134 plasmid 1, complete sequenceMandelate racemase/muconate lactonizing enzyme7e-0858.5
NC_019978:2532640:2540084254008425412321149Halobacteroides halobius DSM 5150, complete genomeenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase7e-0858.5
NC_019974:1184871:1230980123098012321311152Natronococcus occultus SP4, complete genomeenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase7e-0858.5
NC_002578:1434396:1441606144160614427001095Thermoplasma acidophilum DSM 1728, complete genomemandelate racemase related protein8e-0858.5
NC_015733:2720183:2742169274216927434821314Pseudomonas putida S16 chromosome, complete genomemandelate racemase/muconate lactonizing protein1e-0758.2
NC_007963:2777066:2782685278268527838211137Chromohalobacter salexigens DSM 3043, complete genomemandelate racemase/muconate lactonizing enzyme1e-0758.2
NC_017275:927814:9468219468219479511131Sulfolobus islandicus HVE10/4 chromosome, complete genomemandelate racemase/muconate lactonizing family protein1e-0758.2
NC_014839:12519:172471724718019773Pantoea sp. At-9b plasmid pPAT9B02, complete sequence9e-0858.2
NC_012669:1011473:1016366101636610176671302Beutenbergia cavernae DSM 12333, complete genomeMandelate racemase/muconate lactonizing protein2e-0757
NC_015571:801715:8202818202818213511071Porphyromonas gingivalis TDC60, complete genomemandelate racemase/muconate lactonizing enzyme family protein2e-0757
NC_015711:7265439:7270641727064172717591119Myxococcus fulvus HW-1 chromosome, complete genomemandelate racemase/muconate lactonizing enzyme family protein2e-0757
NC_009256:3056000:3075584307558430767321149Burkholderia vietnamiensis G4 chromosome 1, complete sequencegalactonate dehydratase4e-0756.2
NC_016610:2077603:2080176208017620812491074Tannerella forsythia ATCC 43037 chromosome, complete genomeputative o-succinylbenzoate synthase5e-0755.8
NC_007952:3196085:3229683322968332307621080Burkholderia xenovorans LB400 chromosome 2, complete sequencePutative mandelate racemase (MdlA)7e-0755.5
NC_019974:1184871:1201337120133712024221086Natronococcus occultus SP4, complete genomeenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase1e-0654.7
NC_018000:1914945:1956256195625619573711116Sinorhizobium fredii USDA 257 chromosome, complete genomeL-alanine-DL-glutamate epimerase-like protein1e-0654.3
NC_006396:508802:5107795107795120291251Haloarcula marismortui ATCC 43049 chromosome I, complete sequencemandelate racemase/muconate lactonizing enzyme family1e-0654.3
NC_002950:1571383:1599190159919016002601071Porphyromonas gingivalis W83, complete genomemandelate racemase/muconate lactonizing enzyme family protein2e-0653.9
NC_010617:558954:5817775817775827901014Kocuria rhizophila DC2201, complete genomeputative o-succinylbenzoate synthase3e-0653.1
NC_019974:2421422:2444798244479824460361239Natronococcus occultus SP4, complete genomeenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase4e-0652.8
NC_008786:3045770:3053931305393130551271197Verminephrobacter eiseniae EF01-2, complete genomeMandelate racemase/muconate lactonizing enzyme, N-terminal domain protein5e-0652.8
NC_007298:1721425:173357117335711734527957Dechloromonas aromatica RCB, complete genomeMandelate racemase/muconate lactonizing enzyme6e-0652