Pre_GI Gene

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Host: NC_006905 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006905:1766000 Salmonella enterica subsp. enterica serovar Choleraesuis str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
17660081766571564putative Smr domainQuickGO ontologyBLASTP
17668291767344516O-6-alkylguanine-DNAcysteine-protein methyltransferaseQuickGO ontologyBLASTP
17674471768292846transcriptional regulation of aerobic anaerobic respiration osmotic balance CRP familyQuickGO ontologyBLASTP
17684431769390948putative universal stress proteinQuickGO ontologyBLASTP
17694451769831387putative inner membrane proteinQuickGO ontologyBLASTP
176993817709691032putative integral membrane proteinQuickGO ontologyBLASTP
17710521771654603putative transcriptional regulatorQuickGO ontologyBLASTP
17716981772384687putative cytoplasmic proteinQuickGO ontologyBLASTP
17724121772750339hypothetical proteinBLASTP
17735131774343831putative outer membrane or exportedQuickGO ontologyBLASTP
17763841777229846putative serinethreonine protein kinaseQuickGO ontologyBLASTP
17775231778380858putative bacterial regulatory helix-turn-helix proteins araC familyQuickGO ontologyBLASTP
177882717798821056putative cytoplasmic proteinQuickGO ontologyBLASTP
17800961780350255putative outer membrane lipoproteinQuickGO ontologyBLASTP
17804611781051591putative bacterial regulatory helix-turn-helix proteins araC familyQuickGO ontologyBLASTP
17811291781842714oxidoreductaseQuickGO ontologyBLASTP
17819331782802870putative aldoketo reductase familyQuickGO ontologyBLASTP
17830791783984906putative transcriptional regulator LysR familyQuickGO ontologyBLASTP
178484317867441902periplasmic murein tripeptide transport protein also negative regulator of mulitple antibiotic resistanceQuickGO ontologyBLASTP
17869341787662729putative carboxypeptidaseQuickGO ontologyBLASTP
17876371788602966putative chloromuconate cycloisomerase muconate cycloisomeraseQuickGO ontologyBLASTP