Pre_GI: BLASTP Hits

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Query: NC_012796:4075583:4125454 Desulfovibrio magneticus RS-1, complete genome

Start: 4125454, End: 4127625, Length: 2172

Host Lineage: Desulfovibrio magneticus; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Isolated from freshwater sulfide-rich mud of a waterway near Kameno river, Wakayama, in Japan. This organism is a sulfate-reducing delta proteobacterium which synthesizes intracellular magnetite particles. Desulfovibrio magneticus produces irregular, membrane-bound magnetite particles, unlike other magnetite-producing bacteria which contain crystalline magnetite in the cytoplasm. Desulfovibrio magneticus does not migrate along a magnetic field but swims randomly.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012796:2090000:2095549209554920977262178Desulfovibrio magneticus RS-1, complete genomehelicase RecD/TraA family protein01228
NC_008554:2308500:2328598232859823307962199Syntrophobacter fumaroxidans MPOB, complete genomehelicase, RecD/TraA family0778
NC_011365:1103927:1116217111621711184032187Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomehelicase, RecD/TraA family0710
NC_010125:2884762:2896416289641628986022187Gluconacetobacter diazotrophicus PAl 5, complete genomeputative exodeoxyribonuclease0707
NC_010125:955863:9835099835099856952187Gluconacetobacter diazotrophicus PAl 5, complete genomeputative exodeoxyribonuclease V alpha chain0704
NC_008609:1976403:2006218200621820084042187Pelobacter propionicus DSM 2379, complete genomehelicase, RecD/TraA family0679
NC_010172:5447189:83038303105042202Methylobacterium extorquens PA1, complete genomehelicase, RecD/TraA family0672
NC_011757:5693584:5700531570053157027832253Methylobacterium chloromethanicum CM4, complete genomehelicase, RecD/TraA family0669
NC_010511:6067000:6080978608097860832122235Methylobacterium sp. 4-46 chromosome, complete genomerecombinase D0665
NC_011027:817311:8179938179938201942202Chlorobaculum parvum NCIB 8327, complete genomehelicase, RecD/TraA family0654
NC_019697:1696000:1699454169945417017062253Chamaesiphon minutus PCC 6605, complete genomehelicase, putative, RecD/TraA family0649
NC_003155:6444500:6456160645616064584362277Streptomyces avermitilis MA-4680, complete genomeexodeoxyribonuclease V0642
NC_013929:6526745:6536994653699465392552262Streptomyces scabiei 87.22 chromosome, complete genomeDNA-binding protein4e-179628
NC_010793:81219:8427684276864712196Orientia tsutsugamushi str. Ikeda, complete genomeexodeoxyribonuclease V alpha subunit3e-168592
NC_021182:4427468:4430951443095144331582208Clostridium pasteurianum BC1, complete genomehelicase, putative, RecD/TraA family3e-164579
NC_018664:239000:2433912433912456162226Clostridium acidurici 9a chromosome, complete genomeRecD/TraA family helicase RecD3e-164579
NC_009922:2721343:2731601273160127338472247Alkaliphilus oremlandii OhILAs, complete genomehelicase, RecD/TraA family1e-162573
NC_014365:2037506:2059009205900920611712163Desulfarculus baarsii DSM 2075 chromosome, complete genomehelicase, RecD/TraA family2e-162572
NC_009633:760872:7692317692317714952265Alkaliphilus metalliredigens QYMF chromosome, complete genomerecombinase D6e-161568
NC_009012:2661795:2675408267540826776482241Clostridium thermocellum ATCC 27405, complete genomehelicase, RecD/TraA family1e-160567
NC_009495:183767:2021422021422043762235Clostridium botulinum A str. ATCC 3502 chromosome, complete genomehelicase, RecD/TraA family1e-158560
NC_002179:667182:6852326852326874302199Chlamydophila pneumoniae AR39, complete genomeexodeoxyribonuclease V, alpha subunit5e-157555
NC_017285:671546:6896006896006917982199Chlamydophila pneumoniae LPCoLN chromosome, complete genomeRecD/TraA family helicase5e-157555
NC_008261:2708929:2708929270892927111632235Clostridium perfringens ATCC 13124, complete genomehelicase, RecD/TraA family3e-153542
NC_003366:2494907:2494907249490724971412235Clostridium perfringens str. 13, complete genomeexodeoxyribonuclease V alpha subunit5e-153541
NC_010723:485874:5040445040445062632220Clostridium botulinum E3 str. Alaska E43, complete genomehelicase, RecD/TraA family2e-149530
NC_020134:2772500:2784877278487727870902214Clostridium stercorarium subsp. stercorarium DSM 8532, completehelicase, RecD/TraA family2e-146520
NC_014833:2988814:2995209299520929974672259Ruminococcus albus 7 chromosome, complete genomehelicase, RecD/TraA family4e-117422
NC_015573:776209:7777177777177798042088Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehelicase, RecD/TraA family1e-116421
NC_010337:2339056:2339823233982323419762154Heliobacterium modesticaldum Ice1, complete genomeexodeoxyribonuclease V, alpha chain, RecD1e-114414
NC_017200:4191963:4208883420888342112192337Bacillus thuringiensis serovar finitimus YBT-020 chromosome,exodeoxyribonuclease V subunit alpha4e-108392
NC_007530:4176462:4198106419810642004182313Bacillus anthracis str. 'Ames Ancestor', complete genomehelicase, putative9e-108391
NC_014335:4113154:4129812412981241321482337Bacillus cereus biovar anthracis str. CI chromosome, completeRecD/TraA family helicase1e-107391
NC_011969:4065460:4084245408424540865812337Bacillus cereus Q1 chromosome, complete genomeexodeoxyribonuclease v, alpha subunit1e-107390
NC_011658:4171237:4188885418888541912212337Bacillus cereus AH187 chromosome, complete genomeputative helicase1e-107390
NC_005957:4169610:4187265418726541896012337Bacillus thuringiensis serovar konkukian str. 97-27, completeexodeoxyribonuclease V, alpha subunit2e-107390
NC_010184:4219257:4234557423455742368932337Bacillus weihenstephanensis KBAB4, complete genomehelicase, RecD/TraA family2e-107390
NC_011772:4321117:4336135433613543384712337Bacillus cereus G9842, complete genomeputative helicase4e-107389
NC_006448:1568000:1576578157657815790822505Streptococcus thermophilus LMG 18311, complete genomeexodeoxyribonuclease V1e-96354
NC_012925:191501:2111252111252136142490Streptococcus suis P1/7, complete genomehypothetical protein3e-96353
NC_006449:1572000:1580139158013915826432505Streptococcus thermophilus CNRZ1066, complete genomeexodeoxyribonuclease V5e-96352
NC_014365:2037506:2040817204081720430452229Desulfarculus baarsii DSM 2075 chromosome, complete genomeATP-dependent RecD/TraA family DNA helicase2e-80300
NC_017187:1305805:1319745131974513220722328Arcobacter butzleri ED-1, complete genomeexodeoxyribonuclease V subunit alpha2e-69264
NC_017955:2494640:2540042254004225419881947Modestobacter marinus, complete genomeATP-dependent exoDNAse subunit alpha/helicase superfamily I protein3e-59230
NC_010172:798923:808552808552809130579Methylobacterium extorquens PA1, complete genomehelicase, RecD/TraA family3e-44181
NC_014117:442616:4932384932384955112274Burkholderia sp. CCGE1002 chromosome chromosome 1, completeAAA ATPase6e-41169
NC_008577:3485878:3495433349543334975982166Shewanella sp. ANA-3 chromosome 1, complete sequenceAAA ATPase9e-38159
NC_014394:2577949:2590285259028525926032319Gallionella capsiferriformans ES-2 chromosome, complete genomeAAA ATPase1e-37158
NC_015725:926824:9456689456689479382271Mycoplasma bovis Hubei-1 chromosome, complete genomeexodeoxyribonuclease V subunit alpha7e-37155
NC_003910:187630:2001942001942025602367Colwellia psychrerythraea 34H, complete genomeputative helicase1e-35152
NC_008435:2658986:2722151272215127243102160Rhodopseudomonas palustris BisA53, complete genomehypothetical protein2e-35151
NC_009665:639914:6482456482456503982154Shewanella baltica OS185 chromosome, complete genomeATPase AAA3e-35150
NC_011663:674069:6824066824066845592154Shewanella baltica OS223 chromosome, complete genomeATPase AAA3e-35150
NC_018645:4945698:4951424495142449534392016Desulfobacula toluolica Tol2, complete genomeexodeoxyribonuclease V subunit alpha1e-33145
NC_008639:1573971:1590428159042815921731746Chlorobium phaeobacteroides DSM 266, complete genomeexodeoxyribonuclease V, alpha subunit4e-33143
NC_019940:2546500:2565827256582725677221896Thioflavicoccus mobilis 8321 chromosome, complete genomeexodeoxyribonuclease V subunit alpha1e-32142
NC_010803:1436397:1452865145286514546311767Chlorobium limicola DSM 245, complete genomeexodeoxyribonuclease V, alpha subunit1e-31138
NC_008740:2563278:2574464257446425767072244Marinobacter aquaeolei VT8, complete genomeAAA ATPase1e-31138
NC_004459:1794540:1794540179454017966542115Vibrio vulnificus CMCP6 chromosome I, complete sequenceATP-dependent exoDNAse alpha subunit7e-30132
NC_015437:1066014:109637710963771096679303Selenomonas sputigena ATCC 35185 chromosome, complete genome3e-29130
NC_010498:3023442:3039266303926630410921827Escherichia coli SMS-3-5, complete genomeexodeoxyribonuclease V, alpha subunit1e-28128
NC_013361:3823347:3839171383917138409971827Escherichia coli O26:H11 str. 11368 chromosome, complete genomeexonuclease V subunit alpha3e-28127
NC_007613:2699500:2713369271336927151951827Shigella boydii Sb227, complete genomeATP-dependent dsDNA/ssDNA exonuclease V subunit3e-28127
NC_008253:2965573:2981289298128929831151827Escherichia coli 536, complete genomeexodeoxyribonuclease V alpha chain7e-28126
NC_011745:3197584:3213407321340732152331827Escherichia coli ED1a chromosome, complete genomeexonuclease V subunit alpha8e-28125
NC_007946:3125577:3141071314107131428971827Escherichia coli UTI89, complete genomeexodeoxyribonuclease V alpha chain8e-28125
NC_011742:3057444:3072950307295030747761827Escherichia coli S88 chromosome, complete genomeexonuclease V subunit alpha8e-28125
NC_010694:3055403:3053556305355630554061851Erwinia tasmaniensis, complete genomeExodeoxyribonuclease V alpha chain1e-26122
NC_007712:3382000:3399933339993334017921860Sodalis glossinidius str. 'morsitans', complete genomeexodeoxyribonuclease V alpha subunit4e-26120
NC_009481:1365000:1385306138530613869191614Synechococcus sp. WH 7803 chromosome, complete genomeexodeoxyribonuclease V subunit alpha2e-25118
NC_011206:2512667:2519649251964925216011953Acidithiobacillus ferrooxidans ATCC 53993, complete genomeexodeoxyribonuclease V, alpha subunit1e-24115
NC_017271:4852351:4871059487105948733682310Xanthomonas campestris pv. raphani 756C chromosome, completeexodeoxyribonuclease V subunit alpha9e-23109
NC_015713:2453409:2463825246382524652491425Simkania negevensis Z chromosome gsn.131, complete genomeexodeoxyribonuclease V subunit alpha9e-21102
NC_015573:776209:8021148021148046932580Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehypothetical protein3e-1997.8
NC_003902:4989855:5006813500681350090502238Xanthomonas campestris pv. campestris str. ATCC 33913, completeexodeoxyribonuclease V alpha chain3e-1894.4
NC_007086:5064053:5079498507949850817352238Xanthomonas campestris pv. campestris str. 8004, complete genomeexodeoxyribonuclease V alpha chain3e-1894.4
NC_010688:4991410:5009134500913450113682235Xanthomonas campestris pv. campestris, complete genomeexodeoxyribonuclease V alpha chain3e-1894.4
NC_016048:522637:5316525316525329381287Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein1e-1792.4
NC_014924:3334386:3352228335222833541021875Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeexodeoxyribonuclease V, alpha subunit5e-1790.1
NC_015740:3678342:3676216367621636783452130Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeexodeoxyribonuclease V subunit alpha1e-1689
NC_014370:885937:9236959236959272943600Prevotella melaninogenica ATCC 25845 chromosome chromosome I,hypothetical protein2e-1585.1
NC_016111:5515462:5529101552910155314072307Streptomyces cattleya NRRL 8057, complete genomehypothetical protein2e-1481.6
NC_004061:498483:5020345020345038421809Buchnera aphidicola str. Sg (Schizaphis graminum), complete genomeexodeoxyribonuclease V 67 kDa polypeptide4e-1480.9
NC_018691:3496420:3496420349642034983661947Alcanivorax dieselolei B5 chromosome, complete genomeExodeoxyribonuclease V alpha chain5e-1480.5
NC_015562:1413264:1422784142278414260893306Methanotorris igneus Kol 5 chromosome, complete genomeexodeoxyribonuclease V5e-1480.5
NC_016109:7445603:7469591746959174718582268Kitasatospora setae KM-6054, complete genomehypothetical protein7e-1479.7
NC_012791:4794362:4818231481823148203572127Variovorax paradoxus S110 chromosome 1, complete genomeexodeoxyribonuclease V, alpha subunit1e-1379
NC_017259:480656:4806564806564824641809Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,exodeoxyribonuclease V 67 kDa polypeptide3e-1377.8
NC_013851:3478153:3493536349353634957582223Allochromatium vinosum DSM 180 chromosome, complete genomeexodeoxyribonuclease V, alpha subunit4e-1377
NC_011991:65368:6536865368694384071Agrobacterium vitis S4 plasmid pAtS4b, complete sequenceTi-type conjugative transfer relaxase TraA2e-1274.7
NC_010814:1441327:1446527144652714501713645Geobacter lovleyi SZ, complete genomeExodeoxyribonuclease V9e-1272.8
NC_010338:359940:3722873722873751452859Caulobacter sp. K31, complete genomeTi-type conjugative transfer relaxase TraA1e-1172.4
NC_014006:3124818:3167502316750231703452844Sphingobium japonicum UT26S chromosome 1, complete genomeconjugal transfer protein TraA2e-1171.6
NC_009720:2945655:2945655294565529485852931Xanthobacter autotrophicus Py2, complete genomeconjugal transfer relaxase TraA5e-1170.5
NC_009720:251703:2737272737272766572931Xanthobacter autotrophicus Py2, complete genomeconjugal transfer relaxase TraA5e-1170.5
NC_014217:2760898:2762803276280327657602958Starkeya novella DSM 506 chromosome, complete genomeTi-type conjugative transfer relaxase TraA4e-1170.5
NC_015508:296856:2968562968563006473792Agrobacterium sp. H13-3 chromosome linear, complete sequenceConjugal transfer protein traA1e-1069.3
NC_002663:564958:5936695936695956421974Pasteurella multocida subsp. multocida str. Pm70, complete genomeRecD1e-1068.9
NC_007958:4371125:4393639439363943967583120Rhodopseudomonas palustris BisB5, complete genomeMobA/MobL protein2e-1068.2
NC_010338:1216385:1217970121797012208282859Caulobacter sp. K31, complete genomeTi-type conjugative transfer relaxase TraA3e-1067.8
NC_013521:302574:3137363137363164802745Sanguibacter keddieii DSM 10542, complete genomehypothetical protein9e-1066.2
NC_009445:838281:8382818382818412923012Bradyrhizobium sp. ORS 278 chromosome, complete genomeconjugal transfer relaxase TraA8e-1066.2
NC_015703:4348545:4363702436370243651201419Runella slithyformis DSM 19594 chromosome, complete genomeATP-dependent exoDNAse (exonuclease V)7e-1066.2
NC_007925:138927:1633911633911664953105Rhodopseudomonas palustris BisB18, complete genomeMobA/MobL protein1e-0965.9
NC_009720:464078:4822914822914852482958Xanthobacter autotrophicus Py2, complete genomeconjugal transfer relaxase TraA2e-0965.1
NC_009445:1316000:1316372131637213193262955Bradyrhizobium sp. ORS 278 chromosome, complete genomeconjugal transfer relaxase TraA4e-0963.9
NC_015177:258504:2653212653212667121392Pedobacter saltans DSM 12145 chromosome, complete genomeexonuclease V subunit alpha2e-0861.6
NC_007925:1085500:1087177108717710902813105Rhodopseudomonas palustris BisB18, complete genomeMobA/MobL protein2e-0861.6
NC_014500:2479814:2498288249828825003332046Dickeya dadantii 3937 chromosome, complete genomeexonuclease V (RecBCD complex), subunit alpha4e-0860.8
NC_002939:805794:8153668153668180892724Geobacter sulfurreducens PCA, complete genomehelicase, putative5e-0860.5
NC_018681:7692560:7700810770081077035542745Nocardia brasiliensis ATCC 700358 chromosome, complete genomehelicase7e-0859.7
NC_020054:3501467:350146735014673502270804Fibrella aestuarina BUZ 2 drat genomeexonuclease V subunit alpha1e-0759.3
NC_016631:3917253:3931643393164339343962754Granulicella mallensis MP5ACTX8 chromosome, complete genomeconjugative relaxase domain-containing protein3e-0757.8
NC_010572:82000:1130761130761169873912Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative exodeoxyribonuclease-like protein2e-0655.1
NC_010572:8408500:8428943842894384328543912Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative exodeoxyribonuclease-like protein2e-0655.1
NC_009445:6424000:6443614644361464466253012Bradyrhizobium sp. ORS 278 chromosome, complete genomeconjugal transfer relaxase TraA2e-0655.1