Pre_GI Gene

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Host: NC_010793 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010793:81219 Orientia tsutsugamushi str. Ikeda, complete genome

Host Lineage: Orientia tsutsugamushi; Orientia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This organism is the causative agent of scrub typhus, and like other members of the Rickettsiales is an obligate intracellular organism. Scrub typhus, which occurs in rural and agricultural areas, is one of the most common infectious diseases in southeast Asia where an estimated 1 million cases occur each year. Many cases are mild, but if left untreated, a variety of serious illnesses can arise and fatality rates can range from 1-35%. Transmission occurs via an insect vector through the bite of the larval trombiculid mite (chiggers). The bacterium is transmitted transovarially in mites (from females to their offspring).

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
81219830751857hypothetical protein
8312383878756tRNA guanine-N1-methyltransferaseQuickGO ontologyBLASTP
838758424937550S ribosomal protein L19QuickGO ontologyBLASTP
84276864712196exodeoxyribonuclease V alpha subunitQuickGO ontologyBLASTP
8747588377903branched-chain amino acid aminotransferaseQuickGO ontologyBLASTP
8835889254897dihydrodipicolinate synthaseQuickGO ontologyBLASTP
8925789718462small protein B homologQuickGO ontologyBLASTP
8973890646909protease IVQuickGO ontologyBLASTP
9065791565909lipoic acid synthetaseQuickGO ontologyBLASTP
9158692032447hypothetical proteinBLASTP
9201692750735phosphoribosylaminoimidazole-succinocarboxamide synthaseQuickGO ontologyBLASTP
9323093472243transposaseQuickGO ontologyBLASTP
9388994233345putative integraseQuickGO ontologyBLASTP
9444394784342putative integraseQuickGO ontologyBLASTP
9545595604150hypothetical proteinBLASTP
9560495747144putative conjugative transfer protein TraEQuickGO ontologyBLASTP
9583496157324putative conjugative transfer protein TraEQuickGO ontologyBLASTP
9615496456303hypothetical proteinBLASTP
9645696560105hypothetical proteinBLASTP
9667296899228putative conjugative transfer protein TraBQuickGO ontologyBLASTP
9686297131270putative conjugative transfer protein TraBQuickGO ontologyBLASTP
9713197460330hypothetical proteinBLASTP
97372994532082putative conjugative transfer protein TraCQuickGO ontologyBLASTP
9965299930279putative conjugative transfer protein TraCQuickGO ontologyBLASTP
99927100586660putative conjugative transfer protein TraWQuickGO ontologyBLASTP
100672100875204hypothetical proteinBLASTP
100876101853978putative conjugative transfer protein TraUQuickGO ontologyBLASTP
102142103110969transposaseQuickGO ontologyBLASTP
103375103818444putative conjugative transfer protein TraGQuickGO ontologyBLASTP
104006104392387TPR repeat-containing protein 01_01QuickGO ontologyBLASTP