Pre_GI Gene

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Host: NC_010572 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010572:82000 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
82205832691065putative ArsR-family transcriptional regulatorQuickGO ontologyBLASTP
8326683700435hypothetical protein
8453284825294hypothetical protein
8491685536621hypothetical protein
8573486078345hypothetical proteinBLASTP
8615186822672hypothetical proteinBLASTP
8701087465456hypothetical protein
8756288011450putative transposaseQuickGO ontologyBLASTP
8800888373366putative transposaseQuickGO ontologyBLASTP
8868688982297hypothetical protein
8969390163471hypothetical protein
9025490799546hypothetical proteinBLASTP
9094391200258hypothetical protein
9142392244822hypothetical proteinBLASTP
9226393192930putative DNA-binding proteinQuickGO ontologyBLASTP
9328593518234putative regulatory proteinQuickGO ontologyBLASTP
9369894207510putative regulatory protein containing a conserved C-terminal domainQuickGO ontologyBLASTP
9432394898576hypothetical proteinBLASTP
9522895785558hypothetical proteinBLASTP
95785982982514hypothetical proteinBLASTP
9894199441501hypothetical proteinBLASTP
99586100347762hypothetical proteinBLASTP
100493100642150hypothetical proteinBLASTP
100727101578852hypothetical proteinBLASTP
1015871037072121putative transposaseQuickGO ontologyBLASTP
103824104732909putative ATPGTP-binding proteinQuickGO ontologyBLASTP
1049501060291080hypothetical proteinBLASTP
106026106295270hypothetical proteinBLASTP
1062891074731185putative endonuclease VIIQuickGO ontologyBLASTP
107701108693993hypothetical proteinBLASTP
108752109690939hypothetical proteinBLASTP
1096971120092313hypothetical proteinBLASTP
112006112740735hypothetical proteinBLASTP
112760112978219hypothetical proteinBLASTP
1130761169873912putative exodeoxyribonuclease-like proteinQuickGO ontologyBLASTP
1172561192051950hypothetical proteinBLASTP
119237119722486hypothetical proteinBLASTP
1197191211011383hypothetical proteinBLASTP
121306121740435hypothetical proteinBLASTP
121881122777897putative IS1647-like transposaseQuickGO ontologyBLASTP
123437123715279hypothetical proteinBLASTP
1238951257931899hypothetical proteinBLASTP
1263201276601341hypothetical proteinBLASTP
127755128036282hypothetical proteinBLASTP
1281831292081026hypothetical proteinBLASTP
129233130174942hypothetical proteinBLASTP
130222131181960hypothetical proteinBLASTP
1313941325511158hypothetical proteinBLASTP
132859133356498putative acetyltransferaseQuickGO ontologyBLASTP
1334981354531956hypothetical protein with SsgA-like domainQuickGO ontologyBLASTP
135450136307858hypothetical proteinBLASTP
136504136860357hypothetical proteinBLASTP
1373701398262457putative molecular chaperone with protein kinase domainQuickGO ontologyBLASTP
140037140435399hypothetical proteinBLASTP
1405001416781179hypothetical proteinBLASTP
141857142792936hypothetical protein
143100143963864hypothetical proteinBLASTP
144052144360309hypothetical protein
144434144931498hypothetical protein