Pre_GI: BLASTP Hits

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Query: NC_010572:82000:93285 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Start: 93285, End: 93518, Length: 234

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017093:8518961:852422085242208524456237Actinoplanes missouriensis 431, complete genomehypothetical protein2e-2097.8
NC_014666:8198554:822251982225198222749231Frankia sp. EuI1c chromosome, complete genomeprotein of unknown function DUF3975e-2096.3
NC_014210:618500:637091637091637324234Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,protein of unknown function DUF3978e-1992.4
NC_016582:10104458:101235291012352910123765237Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein2e-1477.4
NC_007777:461500:470346470346470555210Frankia sp. CcI3, complete genomeprotein of unknown function DUF3973e-1477
NC_015953:3258000:326457532645753264814240Streptomyces sp. SirexAA-E chromosome, complete genomehypothetical protein1e-1375.1
NC_016887:4403872:441580044158004416006207Nocardia cyriacigeorgica GUH-2, complete genomehypothetical protein2e-1373.9
NC_006361:498305:507996507996508202207Nocardia farcinica IFM 10152, complete genomehypothetical protein3e-1373.9
NC_013595:8553904:856210985621098562315207Streptosporangium roseum DSM 43021, complete genomehypothetical protein2e-1271.2
NC_008278:6885254:690709169070916907285195Frankia alni ACN14a, complete genomePutative regulator3e-1270.5
NC_013929:7663631:767086776708677671157291Streptomyces scabiei 87.22 chromosome, complete genomeAbaA-like protein3e-1167
NC_018750:6950695:697089569708956971131237Streptomyces venezuelae ATCC 10712, complete genomeputative AbaA protein7e-1165.9
NC_016887:55000:709557095571167213Nocardia cyriacigeorgica GUH-2, complete genomehypothetical protein6e-1062.8
NC_016887:5988878:599565059956505995853204Nocardia cyriacigeorgica GUH-2, complete genomehypothetical protein7e-0959.3
NC_016887:511034:519978519978520184207Nocardia cyriacigeorgica GUH-2, complete genomehypothetical protein9e-0958.9
NC_016582:9459566:946850194685019468737237Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein4e-0857
NC_019673:2051363:206826920682692068490222Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein4e-0857
NC_015434:3755560:376751837675183767712195Verrucosispora maris AB-18-032 chromosome, complete genomehypothetical protein5e-0856.2
NC_013159:1225866:123993612399361240133198Saccharomonospora viridis DSM 43017, complete genomeprotein of unknown function (DUF397)8e-0855.8
NC_016582:4983222:499046449904644990679216Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein9e-0855.5
NC_009380:725870:725692725692725877186Salinispora tropica CNB-440 chromosome, complete genomehypothetical protein1e-0755.5
NC_009953:1581088:159174815917481591939192Salinispora arenicola CNS-205 chromosome, complete genomehypothetical protein2e-0754.7
NC_015434:4640769:464675846467584646955198Verrucosispora maris AB-18-032 chromosome, complete genomehypothetical protein4e-0753.5
NC_009380:581000:590390590390590578189Salinispora tropica CNB-440 chromosome, complete genomehypothetical protein6e-0753.1
NC_013510:1637730:164875716487571648951195Thermomonospora curvata DSM 43183, complete genomeprotein of unknown function DUF3977e-0752.8
NC_013510:1637730:164834716483471648565219Thermomonospora curvata DSM 43183, complete genomeprotein of unknown function DUF3978e-0752.4
NC_009953:1034809:104188710418871042078192Salinispora arenicola CNS-205 chromosome, complete genomehypothetical protein8e-0752.4
NC_016582:7699420:771727277172727717478207Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein2e-0651.2
NC_013510:5175649:518895951889595189171213Thermomonospora curvata DSM 43183, complete genomeprotein of unknown function DUF3972e-0651.2
NC_009380:4184695:419084941908494191037189Salinispora tropica CNB-440 chromosome, complete genomehypothetical protein3e-0650.8
NC_013159:1225866:124197612419761242173198Saccharomonospora viridis DSM 43017, complete genomeprotein of unknown function (DUF397)3e-0650.4
NC_003155:3095123:309924130992413099561321Streptomyces avermitilis MA-4680, complete genomeBldB protein3e-0650.4
NC_013510:5309143:531913753191375319520384Thermomonospora curvata DSM 43183, complete genomeprotein of unknown function DUF3974e-0650.1
NC_015957:1968587:197046919704691970699231Streptomyces violaceusniger Tu 4113 chromosome, complete genomehypothetical protein5e-0649.7
NC_016113:1143580:115295911529591153168210Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequencehypothetical protein6e-0649.7
NC_003888:6233478:624393862439386244234297Streptomyces coelicolor A3(2), complete genomeregulator, BldB6e-0649.7