Pre_GI: BLASTP Hits

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Query: NC_010572:82000:101587 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Start: 101587, End: 103707, Length: 2121

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010572:8408500:8442223844222384443432121Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative transposase01180
NC_015953:4045500:4052690405269040546932004Streptomyces sp. SirexAA-E chromosome, complete genomeintegrase catalytic subunit2e-109397
NC_016943:1442885:1449514144951414515592046Blastococcus saxobsidens DD2, complete genomeintegrase, catalytic region3e-101369
NC_014814:2588628:2592994259299425948771884Mycobacterium sp. Spyr1 chromosome, complete genomeMu transposase/integrase2e-89330
NC_014814:2588628:2599519259951926016122094Mycobacterium sp. Spyr1 chromosome, complete genomeMu transposase/integrase9e-85315
NC_009338:630130:6360086360086379121905Mycobacterium gilvum PYR-GCK chromosome, complete genomeintegrase catalytic subunit2e-80300
NC_009338:3359500:3364870336487033667741905Mycobacterium gilvum PYR-GCK chromosome, complete genomeintegrase catalytic subunit2e-80300
NC_009338:3410349:3417961341796134195801620Mycobacterium gilvum PYR-GCK chromosome, complete genomeintegrase catalytic subunit1e-74281
NC_013929:3660321:3665072366507236666101539Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein2e-74280
NC_013093:2230171:2237988223798822396701683Actinosynnema mirum DSM 43827, complete genomehypothetical protein3e-69263
NC_014814:2588628:2621572262157226236232052Mycobacterium sp. Spyr1 chromosome, complete genomeintegrase family protein3e-60233
NC_015859:1589707:1600802160080216025501749Corynebacterium variabile DSM 44702 chromosome, complete genomehypothetical protein9e-59228
NC_016109:8761557:8761557876155787640672511Kitasatospora setae KM-6054, complete genomeputative transposase2e-57224
NC_016907:152500:1607851607851627942010Gordonia polyisoprenivorans VH2 plasmid p174, complete sequenceputative transposase6e-38159
NC_009339:149805:1538211538211559682148Mycobacterium gilvum PYR-GCK plasmid pMFLV01, complete sequenceintegrase catalytic subunit4e-36153
NC_017904:1683471:1695590169559016969421353Mycobacterium sp. MOTT36Y chromosome, complete genomeintegrase family protein3e-30134
NC_009338:912894:9244319244319263171887Mycobacterium gilvum PYR-GCK chromosome, complete genomehypothetical protein6e-26119
NC_016111:3308310:3322619332261933252162598Streptomyces cattleya NRRL 8057, complete genometransposase2e-25118
NC_014814:5422972:5460748546074854628232076Mycobacterium sp. Spyr1 chromosome, complete genomeintegrase family protein1e-24115
NC_013441:5025444:5047476504747650497252250Gordonia bronchialis DSM 43247, complete genomeIntegrase catalytic region2e-24114
NC_013595:3952196:3965412396541239676852274Streptosporangium roseum DSM 43021, complete genomehypothetical protein2e-20101
NC_009338:3410349:341613234161323416650519Mycobacterium gilvum PYR-GCK chromosome, complete genomehypothetical protein4e-1273.9
NC_016111:2912962:2930255293025529324952241Streptomyces cattleya NRRL 8057, complete genomehypothetical protein5e-1067
NC_014215:2259290:2281505228150522832051701Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,TniA protein2e-0965.1
NC_017192:1885457:1892107189210718942152109Arcobacter sp. L, complete genomephage DNA transposition protein5e-0963.5
NC_019673:6394319:6402870640287064042431374Saccharothrix espanaensis DSM 44229 complete genomeputative integrase2e-0861.2
NC_016860:4055117:4082776408277640844551680Salmonella enterica subsp. enterica serovar Typhimurium strputative transposase TniA3e-0860.8
NC_009349:78000:8685886858885731716Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completeTniA protein4e-0860.8
NC_017986:1885613:1888422188842218901011680Pseudomonas putida ND6 chromosome, complete genomeTniA5e-0860.1
NC_002678:5060670:5088718508871850903251608Mesorhizobium loti MAFF303099, complete genometransposase9e-0859.3
NC_016616:2644883:2650240265024026519221683Dechlorosoma suillum PS chromosome, complete genomeMu transposase/integrase9e-0859.3
NC_007503:2243902:2250848225084822520951248Carboxydothermus hydrogenoformans Z-2901, complete genomeISChy6, transposase4e-0757.4
NC_009349:78000:817558175510125019496Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, complete1e-0655.8
NC_009656:3127240:3138806313880631406501845Pseudomonas aeruginosa PA7 chromosome, complete genomeintegrase catalytic subunit2e-0655.1
NC_007509:3668:2569725697276461950Burkholderia sp. 383 chromosome 3, complete sequencehypothetical protein3e-0654.3
NC_008061:2153495:2168333216833321701321800Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceIntegrase, catalytic region7e-0653.1
NC_008543:90312:99641996411014401800Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceIntegrase, catalytic region7e-0653.1