Pre_GI: BLASTP Hits

Some Help

Query: NC_010572:82000:117256 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Start: 117256, End: 119205, Length: 1950

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010572:8408500:8426725842672584286741950Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein01244
NC_003902:1858349:1868950186895018709291980Xanthomonas campestris pv. campestris str. ATCC 33913, completeplasmid-related protein7e-74278
NC_006350:845513:8940838940838960291947Burkholderia pseudomallei K96243 chromosome 1, complete sequencehypothetical protein1e-73278
NC_014118:1083492:1091620109162010935451926Burkholderia sp. CCGE1002 chromosome chromosome 2, completehypothetical protein4e-72273
NC_007626:1202704:1209550120955012115051956Magnetospirillum magneticum AMB-1, complete genomehypothetical protein3e-69263
NC_007907:5185510:5208440520844052106322193Desulfitobacterium hafniense Y51, complete genomehypothetical protein5e-39163
NC_012483:3731542:3790419379041937923861968Acidobacterium capsulatum ATCC 51196, complete genomehypothetical protein3e-36153
NC_014623:2418762:2444046244404624460011956Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein2e-30134
NC_011386:136223:1587401587401606981959Oligotropha carboxidovorans OM5, complete genomehypothetical protein1e-28128
NC_015684:362236:3680113680113699691959Oligotropha carboxidovorans OM5 chromosome, complete genomehypothetical protein1e-28128
NC_015136:1141925:1153952115395211559071956Burkholderia sp. CCGE1001 chromosome 1, complete sequencehypothetical protein2e-24114
NC_013722:3117442:3118724311872431198661143Xanthomonas albilineans, complete genomehypothetical protein2e-24114
NC_013592:3263005:3270044327004432720351992Dickeya dadantii Ech586, complete genomehypothetical protein4e-23110
NC_009428:807577:8180598180598200171959Rhodobacter sphaeroides ATCC 17025 chromosome, complete genomehypothetical protein4e-20100
NC_019896:76094:840298402984823795Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein4e-1997.1
UCMB5137:174593:1876531876531895871935Bacillus atrophaeus UCMB-5137unknown2e-1894.7
NC_008554:2469156:2476088247608824780581971Syntrophobacter fumaroxidans MPOB, complete genomehypothetical protein2e-1894.4
NC_002505:514732:5231565231565251171962Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein2e-1791.7
NC_012668:83641:9522295222971831962Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein2e-1791.7
NC_016445:2938887:2947311294731129492721962Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein2e-1791.7
NC_016944:514742:5231645231645251251962Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein2e-1791.7
NC_010278:860165:8677948677948697851992Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,hypothetical protein2e-1688.2
NC_009053:895965:9043039043039062941992Actinobacillus pleuropneumoniae L20, complete genomehypothetical protein2e-1687.8
NC_003919:2639080:2643559264355926456642106Xanthomonas axonopodis pv. citri str. 306, complete genomeplasmid-related protein3e-1584.3
NC_019973:2417000:2424111242411124259701860Mesorhizobium australicum WSM2073, complete genomeProtein of unknown function (DUF3732)4e-1583.6
NC_015675:2567000:2574100257410025759591860Mesorhizobium opportunistum WSM2075 chromosome, complete genomehypothetical protein4e-1583.6
NC_014923:2439197:2446947244694724488061860Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeProtein of unknown function DUF37324e-1583.6
NC_015167:1666000:1678348167834816801981851Cellulophaga lytica DSM 7489 chromosome, complete genomehypothetical protein1e-1482
NC_010002:1879220:1944652194465219465021851Delftia acidovorans SPH-1, complete genomeAYP/GTP-binding protein4e-1480.5
NC_014834:3472000:348053834805383481218681Rhodopseudomonas palustris DX-1 chromosome, complete genomehypothetical protein4e-1377
NC_020829:2754203:2771361277136127733762016Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein1e-1172
NC_007005:4515853:4529589452958945314391851Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein3e-1170.9
NC_010552:293703:3043543043543063602007Burkholderia ambifaria MC40-6 chromosome 2, complete sequencehypothetical protein1e-0965.5
NC_008800:1090000:1111058111105811128931836Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,AYP/GTP-binding protein1e-0862
NC_002950:879930:8897988897988916631866Porphyromonas gingivalis W83, complete genomehypothetical protein3e-0861.2
NC_019896:76094:855848558486219636Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein6e-0859.7
NC_016010:1822212:1889469188946918911061638Xanthomonas axonopodis pv. citrumelo F1 chromosome, completehypothetical protein3e-0654.3