Some Help

Query: NC_010572:82000:100727 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Start: 100727, End: 101578, Length: 852

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010572:8408500:844435284443528445203852Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein3e-152537
NC_015953:4045500:405473840547384055451714Streptomyces sp. SirexAA-E chromosome, complete genomehypothetical protein7e-39160
NC_016943:1442885:144875614487561449517762Blastococcus saxobsidens DD2, complete genomehypothetical protein4e-36152
NC_009338:630130:638098638098638769672Mycobacterium gilvum PYR-GCK chromosome, complete genomehypothetical protein1e-30133
NC_013929:3660321:366396336639633664715753Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein2e-30132
NC_009338:3410349:341958734195873420327741Mycobacterium gilvum PYR-GCK chromosome, complete genomehypothetical protein3e-27122
NC_014814:2588628:262082026208202621575756Mycobacterium sp. Spyr1 chromosome, complete genomehypothetical protein2e-22106
NC_009338:3359500:336696033669603367451492Mycobacterium gilvum PYR-GCK chromosome, complete genomehypothetical protein5e-1995.1
NC_014814:2588628:259508225950822595576495Mycobacterium sp. Spyr1 chromosome, complete genomehypothetical protein6e-1685.1
NC_014659:4908182:493401149340114934730720Rhodococcus equi 103S, complete genomehypothetical protein1e-1377.4
NC_017904:1683471:169402816940281694786759Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein1e-1377
NC_013441:5025444:504971250497125050542831Gordonia bronchialis DSM 43247, complete genomehypothetical protein2e-1066.6
NC_009339:149805:155965155965156687723Mycobacterium gilvum PYR-GCK plasmid pMFLV01, complete sequencehypothetical protein5e-0961.6
NC_015859:1589707:160282316028231603596774Corynebacterium variabile DSM 44702 chromosome, complete genomehypothetical protein1e-0860.5
NC_009338:912894:923613923613924392780Mycobacterium gilvum PYR-GCK chromosome, complete genomehypothetical protein1e-0550.8