Pre_GI: BLASTP Hits

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Query: NC_010572:82000:82205 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Start: 82205, End: 83269, Length: 1065

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013929:1119384:112474111247411125739999Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein8e-34144
NC_013595:8553904:8566416856641685674171002Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, ArsR family8e-31134
NC_010572:409863:4129334129334139491017Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative ArsR-family transcriptional regulator1e-30134
NC_013947:3080290:3087191308719130882371047Stackebrandtia nassauensis DSM 44728 chromosome, complete genomehypothetical protein1e-1894
NC_013510:3032114:303514630351463036132987Thermomonospora curvata DSM 43183, complete genomeregulatory protein ArsR5e-1685.5
NC_013595:8162181:819421581942158195204990Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, ArsR family7e-1271.6
NC_017186:6817904:684085968408596841728870Amycolatopsis mediterranei S699 chromosome, complete genomeArsR family transcriptional regulator9e-0858.2
NC_014318:6817860:684081568408156841684870Amycolatopsis mediterranei U32 chromosome, complete genomeArsR family transcriptional regulator9e-0858.2