Pre_GI: BLASTP Hits

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Query: NC_010572:82000:91423 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Start: 91423, End: 92244, Length: 822

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015953:3258000:326582932658293266608780Streptomyces sp. SirexAA-E chromosome, complete genomehypothetical protein2e-65248
NC_007333:3360000:337447733744773375298822Thermobifida fusca YX, complete genomehypothetical protein6e-47187
NC_008278:667023:676844676844677689846Frankia alni ACN14a, complete genomehypothetical protein7e-45181
NC_018681:7624000:764584276458427646645804Nocardia brasiliensis ATCC 700358 chromosome, complete genomehypothetical protein9e-44177
NC_008278:925231:946456946456947346891Frankia alni ACN14a, complete genomehypothetical protein3e-43175
NC_017093:8518961:852241585224158523227813Actinoplanes missouriensis 431, complete genomehypothetical protein6e-43174
NC_019673:7797666:780511078051107805910801Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein1e-42173
NC_008278:3169500:318525331852533186065813Frankia alni ACN14a, complete genomehypothetical protein2e-41169
NC_015953:6212366:624818862481886249003816Streptomyces sp. SirexAA-E chromosome, complete genomehypothetical protein1e-40166
NC_009921:4399000:441989644198964420804909Frankia sp. EAN1pec, complete genomeprotein of unknown function DUF5744e-40165
NC_019673:8348604:837050983705098371318810Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein2e-37155
NC_008278:132000:145888145888146715828Frankia alni ACN14a, complete genomeconserved hypothetical protein; putative S-adenosyl-L-methionine-dependent methyltransferase domain3e-37155
NC_008278:132000:142224142224143021798Frankia alni ACN14a, complete genomeconserved hypothetical protein; putative S-adenosyl-L-methionine-dependent methyltransferase domain4e-35148
NC_019673:1584739:160279416027941603603810Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein7e-35147
NC_013929:7663631:767130376713037672052750Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein6e-34144
NC_014666:1117000:113445811344581135420963Frankia sp. EuI1c chromosome, complete genomeprotein of unknown function DUF5741e-32140
NC_016582:10104458:101220191012201910122486468Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein6e-30131
NC_018681:5627940:564816756481675649003837Nocardia brasiliensis ATCC 700358 chromosome, complete genomehypothetical protein6e-28124
NC_016887:3286436:330876433087643309504741Nocardia cyriacigeorgica GUH-2, complete genomehypothetical protein2e-27122
NC_014666:1969602:199018019901801990572393Frankia sp. EuI1c chromosome, complete genomeprotein of unknown function DUF5744e-24112
NC_009921:1813500:183379818337981834241444Frankia sp. EAN1pec, complete genomeprotein of unknown function DUF5742e-21103
NC_013929:3600343:364576136457613646717957Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein1e-1790.5
NC_015953:3313000:332115033211503322034885Streptomyces sp. SirexAA-E chromosome, complete genomehypothetical protein9e-1684
NC_013929:3600343:362816736281673628931765Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein1e-1480.5
NC_007777:461500:474669474669475115447Frankia sp. CcI3, complete genomeprotein of unknown function DUF5742e-1376.3
NC_014666:1969602:197589419758941976367474Frankia sp. EuI1c chromosome, complete genome2e-1273.6
NC_009921:1813500:181966918196691820154486Frankia sp. EAN1pec, complete genomeprotein of unknown function DUF5742e-0963.5
NC_009921:3098271:311549931154993115921423Frankia sp. EAN1pec, complete genomeprotein of unknown function DUF5744e-0962.4
NC_003276:252217:271772271772272173402Nostoc sp. PCC 7120 plasmid pCC7120alpha, complete sequencehypothetical protein5e-0962
NC_015951:71697:871458714587733589Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, complete1e-0860.1
NC_006361:4521820:453231145323114532583273Nocardia farcinica IFM 10152, complete genomehypothetical protein3e-0859.3
NC_007777:4796627:481698348169834817504522Frankia sp. CcI3, complete genomeprotein of unknown function DUF5745e-0858.5
NC_018524:2246225:227401522740152274848834Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeS-adenosyl methyltransferase family protein2e-0756.6
NC_018524:4599809:461230546123054613216912Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeS-adenosyl methyltransferase family protein1e-0653.9
NC_018524:301992:3061483061483072481101Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeleucine carboxyl methyltransferase family protein7e-0651.2