Pre_GI Gene

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Host: NC_010572 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010572:8408500 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
84085908408976387hypothetical proteinBLASTP
840950984114851977putative cation-transporting P-type ATPaseQuickGO ontologyBLASTP
84115818411943363putative ArsR-family transcriptional regulatorQuickGO ontologyBLASTP
84121138412589477hypothetical protein
84127368413056321hypothetical proteinBLASTP
841337984145361158hypothetical proteinBLASTP
84147498415708960hypothetical proteinBLASTP
84157568416697942hypothetical proteinBLASTP
841672284177471026hypothetical proteinBLASTP
84178948418175282hypothetical proteinBLASTP
841827084196101341hypothetical proteinBLASTP
842013784220351899hypothetical proteinBLASTP
84222158422493279hypothetical proteinBLASTP
84231538424049897putative IS1647-like transposaseQuickGO ontologyBLASTP
84241908424624435hypothetical proteinBLASTP
842482984262111383hypothetical proteinBLASTP
84262088426693486hypothetical proteinBLASTP
842672584286741950hypothetical proteinBLASTP
842894384328543912putative exodeoxyribonuclease-like proteinQuickGO ontologyBLASTP
84329528433170219hypothetical proteinBLASTP
84331908433924735hypothetical proteinBLASTP
843392184362332313hypothetical proteinBLASTP
84362408437178939hypothetical proteinBLASTP
84372378438229993hypothetical proteinBLASTP
843845784396411185putative endonuclease VIIQuickGO ontologyBLASTP
84396358439904270hypothetical proteinBLASTP
843990184409801080hypothetical proteinBLASTP
84411988442106909putative ATPGTP-binding proteinQuickGO ontologyBLASTP
844222384443432121putative transposaseQuickGO ontologyBLASTP
84443528445203852hypothetical proteinBLASTP
84452888445437150hypothetical proteinBLASTP
84455838446344762hypothetical proteinBLASTP
84464898446989501hypothetical proteinBLASTP
844763284501452514hypothetical proteinBLASTP
84501458450702558hypothetical proteinBLASTP