Pre_GI: BLASTP Hits

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Query: NC_012792:962292:971437 Variovorax paradoxus S110 chromosome 2, complete genome

Start: 971437, End: 972060, Length: 624

Host Lineage: Variovorax paradoxus; Variovorax; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Soil. Variovorax paradoxus S110 is able to grow autotrophically using hydrogen gas and carbon dioxide for energy and carbon. Variovorax paradoxus is a nutritionally diverse organism which is commonly isolated from soil. Strains of this organism are able to degrade a number of compounds such as explosives and pesticides. Variovorax paradoxus is also a plant-growth promoting organism, increasing the resistance of the plant to disease and heavy metals.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009434:3611738:368162936816293682249621Pseudomonas stutzeri A1501, complete genomephage integrase family site specific recombinase2e-88324
NC_020209:47504:858688586886488621Pseudomonas poae RE*1-1-14, complete genomesite-specific recombinase XerC3e-88323
NC_020209:47504:604376043761057621Pseudomonas poae RE*1-1-14, complete genomesite-specific recombinase XerC3e-87321
NC_013446:2164974:218941721894172190040624Comamonas testosteroni CNB-2, complete genomephage integrase2e-86318
NC_017075:1970168:197925419792541979877624Rubrivivax gelatinosus IL144, complete genomephage integrase family protein3e-86317
NC_014910:2779573:278745227874522788075624Alicycliphilus denitrificans BC chromosome, complete genomeintegrase family protein7e-86316
NC_015572:2186394:220779522077952208418624Methylomonas methanica MC09 chromosome, complete genomeintegrase family protein3e-85313
NC_015563:4093650:410572541057254106348624Delftia sp. Cs1-4 chromosome, complete genomeintegrase family protein2e-84311
NC_020829:940692:982480982480983100621Pseudomonas denitrificans ATCC 13867, complete genomesite-specific recombinase XerC6e-84310
NC_014153:2077647:208438620843862085012627Thiomonas intermedia K12 chromosome, complete genomeintegrase family protein4e-84310
NC_014539:743523:750816750816751442627Burkholderia sp. CCGE1003 chromosome 1, complete sequenceintegrase family protein1e-83309
NC_014394:1626699:163772816377281638342615Gallionella capsiferriformans ES-2 chromosome, complete genomeintegrase family protein5e-81300
NC_015942:355944:362190362190362819630Acidithiobacillus ferrivorans SS3 chromosome, complete genomeintegrase family protein6e-81300
NC_007336:66000:825458254583171627Ralstonia eutropha JMP134 megaplasmid, complete sequencePhage integrase3e-80297
NC_016002:2946702:296022929602292960843615Pseudogulbenkiania sp. NH8B, complete genomephage integrase family protein5e-80296
NC_010170:4739925:475923847592384759852615Bordetella petrii, complete genomehypothetical protein2e-79294
NC_008702:2520500:252684025268402527454615Azoarcus sp. BH72, complete genomeputative Tyrosine recombinase xerD2e-76285
NC_010511:871905:881963881963882592630Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein7e-74276
NC_011757:3540992:354603435460343546663630Methylobacterium chloromethanicum CM4, complete genomeintegrase family protein1e-72272
NC_009778:1222273:123099312309931231595603Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-72272
NC_008740:3520500:355204135520413552655615Marinobacter aquaeolei VT8, complete genomephage integrase family protein1e-71268
NC_017506:4380196:440114444011444401758615Marinobacter adhaerens HP15 chromosome, complete genomephage integrase family protein3e-71267
NC_016816:4129299:415125441512544151856603Pantoea ananatis LMG 5342, complete genomesite-specific recombinase, phage integrase family7e-71266
NC_012988:769981:823391823391824020630Methylobacterium extorquens DM4, complete genomeDNA integration/recombination/inversion protein, site-specific recombinase, phage integrase family9e-71266
NC_013956:1762171:179168017916801792282603Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein2e-70265
NC_010172:798923:848604848604849233630Methylobacterium extorquens PA1, complete genomeintegrase family protein1e-70265
NC_009512:2238437:224339322433932244109717Pseudomonas putida F1, complete genomephage integrase family protein1e-70265
NC_009438:236424:236424236424237026603Shewanella putrefaciens CN-32 chromosome, complete genomephage integrase family protein4e-70263
NC_011757:5048714:507994450799445080573630Methylobacterium chloromethanicum CM4, complete genomeintegrase family protein2e-69261
NC_017047:2042346:206242220624222063024603Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein2e-68258
NC_009952:2752500:275627227562722756904633Dinoroseobacter shibae DFL 12, complete genomehypothetical protein3e-68257
NC_011751:3048490:307718430771843077864681Escherichia coli UMN026 chromosome, complete genomesite-specific recombinase, phage integrase family3e-66251
NC_010510:339879:339879339879340511633Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeintegrase family protein2e-65248
NC_008043:86470:913399133991971633Silicibacter sp. TM1040 mega plasmid, complete sequencephage integrase9e-65246
NC_010510:339879:352204352204352836633Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeintegrase family protein9e-65246
NC_011004:4073916:410016341001634100795633Rhodopseudomonas palustris TIE-1, complete genomeintegrase family protein4e-64244
NC_007722:851129:863700863700864338639Erythrobacter litoralis HTCC2594, complete genomephage integrase family protein5e-64243
NC_009092:261778:270161270161270757597Shewanella loihica PV-4, complete genomephage integrase family protein3e-53207
NC_014012:3812754:382801038280103828606597Shewanella violacea DSS12, complete genomesite-specific recombinase, phage integrase family4e-52204
NC_017047:2957957:296663329666332967157525Rahnella aquatilis HX2 chromosome, complete genomeintegrase1e-49195
NC_017075:1869326:189689218968921897272381Rubrivivax gelatinosus IL144, complete genomephage integrase family protein1e-48192
NC_008314:477722:499873499873500256384Ralstonia eutropha H16 chromosome 2, complete sequencefragmented site-specific recombinase XerC/XerD6e-48190
NC_016626:1699500:172012117201211720462342Burkholderia sp. YI23 plasmid byi_1p, complete sequenceintegrase family protein2e-43175
NC_014258:42262:537175371754085369Pantoea vagans C9-1 plasmid pPag3, complete sequencehypothetical protein1e-37155
NC_020260:2725201:273642827364282736793366Cronobacter sakazakii Sp291, complete genomehypothetical protein6e-33140
NC_008314:477722:505403505403505858456Ralstonia eutropha H16 chromosome 2, complete sequencetruncated site-specific recombinase3e-31134
NC_007404:387827:395122395122395433312Thiobacillus denitrificans ATCC 25259, complete genomehypothetical protein6e-30130
NC_010511:871905:876911876911877126216Methylobacterium sp. 4-46 chromosome, complete genome2e-24112
NC_004460:708416:725319725319725558240Vibrio vulnificus CMCP6 chromosome II, complete sequenceIntegrase1e-21102
NC_020207:1614000:162429216242921624864573Enterococcus faecium NRRL B-2354, complete genomesite-specific recombinase9e-1993.6
NC_014500:894136:904367904367904684318Dickeya dadantii 3937 chromosome, complete genomeputative recombinase7e-1890.5
NC_010625:1602191:162214016221401622406267Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencehypothetical protein7e-1787
NC_008314:477722:505224505224505406183Ralstonia eutropha H16 chromosome 2, complete sequenceTruncated2e-1582
NC_011883:2680380:269246126924612693054594Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,integrase family protein4e-1478.2
NC_011883:2680380:270035627003562700949594Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,integrase family protein4e-1478.2
NC_012108:2159230:216676321667632167356594Desulfobacterium autotrophicum HRM2, complete genomesite-specific recombinase/integrase XerD2e-1375.9
NC_012563:1681639:170013117001311700736606Clostridium botulinum A2 str. Kyoto, complete genomephage integrase family protein4e-1374.7
NC_010511:4696868:474309747430974743288192Methylobacterium sp. 4-46 chromosome, complete genome4e-1374.7
NC_008497:1111891:111574411157441116331588Lactobacillus brevis ATCC 367, complete genomeIntegrase6e-1373.9
NC_012796:985000:998898998898999455558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase2e-1272.8
NC_012796:3600630:361445136144513615008558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase2e-1272.4
NC_012796:1645856:166448516644851665042558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase3e-1272
NC_012796:3374911:342491734249173425474558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase2e-1272
NC_016052:2335648:234426723442672344818552Tetragenococcus halophilus NBRC 12172, complete genomeputative site-specific recombinase4e-1271.6
UCMB5137:1522159:153732315373231537868546Bacillus atrophaeus UCMB-5137putative bacteriophage integrase5e-1270.9
NC_012796:3600630:362703436270343627591558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase6e-1270.9
NC_014916:22644:437804378044349570Geobacillus sp. Y412MC52 plasmid pGYMC5201, complete sequenceintegrase family protein1e-1170.1
NC_012796:77071:953999539995956558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase1e-1170.1
NC_012796:4075583:416552141655214166078558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase1e-1169.7
NC_014844:511552:517143517143517697555Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeintegrase family protein2e-1169.3
NC_008261:1787345:180851718085171809065549Clostridium perfringens ATCC 13124, complete genomesite-specific recombinase, phage integrase family3e-1168.6
NC_020272:1311932:133478513347851335327543Bacillus amyloliquefaciens IT-45, complete genomesite-specific tyrosine recombinase4e-1168.2
NC_007907:960104:101699610169961017559564Desulfitobacterium hafniense Y51, complete genomehypothetical protein4e-1167.8
NC_013891:1639694:165579916557991656341543Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomesite-specific recombinase, phage integrase family5e-1167.8
NC_020291:1122282:112310111231011123706606Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomephage integrase family protein7e-1167.4
NC_012796:3600630:364833536483353648892558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase7e-1167.4
NC_020409:1173796:118265711826571183256600Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeIntegrase family protein8e-1167
NC_012796:1049034:113043711304371130994558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase8e-1167
NC_014650:603500:628630628630629172543Geobacillus sp. Y4.1MC1 chromosome, complete genomeintegrase7e-1167
NC_012796:77071:114358114358114915558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase1e-1066.6
UCMB5137:1522159:153330715333071533849543Bacillus atrophaeus UCMB-5137site-specific recombinase, phage integrase family protein2e-1066.2
NC_008529:887008:942654942654943220567Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeIntegrase2e-1066.2
NC_008529:906576:916198916198916764567Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeIntegrase2e-1066.2
NC_008529:887008:916198916198916764567Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeIntegrase2e-1066.2
NC_008529:918277:942654942654943220567Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeIntegrase2e-1066.2
NC_008529:906576:942654942654943220567Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeIntegrase2e-1066.2
NC_013766:679906:692805692805693347543Listeria monocytogenes 08-5578 chromosome, complete genomeprophage LambdaSa2, site-specific recombinase, phage integrase family1e-1066.2
NC_004116:1827351:185300518530051853547543Streptococcus agalactiae 2603V/R, complete genomeprophage LambdaSa2, site-specific recombinase, phage integrase family1e-1066.2
NC_004070:747146:762960762960763535576Streptococcus pyogenes MGAS315, complete genomeputative recombinase - phage associated2e-1065.9
NC_004606:1107500:113322111332211133796576Streptococcus pyogenes SSI-1, complete genomeputative integrase/recombinase, XerC/XerD family2e-1065.9
NC_003485:296140:308140308140308715576Streptococcus pyogenes MGAS8232, complete genomehypothetical protein2e-1065.5
NC_009617:1085000:108757010875701088175606Clostridium beijerinckii NCIMB 8052 chromosome, complete genomephage integrase family protein6e-1063.9
NC_012796:1049034:109984510998451100402558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase8e-1063.5
NC_016894:3580274:358909935890993589713615Acetobacterium woodii DSM 1030 chromosome, complete genomehypothetical protein9e-1063.5
NC_016894:3988180:399539039953903996004615Acetobacterium woodii DSM 1030 chromosome, complete genomeprophage LambdaBa04 site-specific recombinase phage integrase family1e-0962.8
NC_012796:1049034:106572110657211066278558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase1e-0962.8
NC_016803:3502749:352127235212723521871600Desulfovibrio desulfuricans ND132 chromosome, complete genomeintegrase family protein2e-0962.4
NC_021184:3533500:354809635480963548656561Desulfotomaculum gibsoniae DSM 7213, complete genomesite-specific recombinase XerD5e-0960.8
NC_012925:1357783:136497613649761365518543Streptococcus suis P1/7, complete genomephage integrase family protein8e-0960.5
NC_012924:1446190:145338314533831453925543Streptococcus suis SC84, complete genomephage integrase family protein8e-0960.5
NC_012926:1496510:150370315037031504245543Streptococcus suis BM407 chromosome, complete genomephage integrase family protein8e-0960.5
NC_020134:1941523:195526219552621955822561Clostridium stercorarium subsp. stercorarium DSM 8532, completeintegrase family protein8e-0960.5
NC_009443:1445936:145312714531271453699573Streptococcus suis 98HAH33, complete genomeprophage LambdaSa2, site-specific recombinase phage integrase family protein9e-0960.1
NC_009442:1446508:145370114537011454273573Streptococcus suis 05ZYH33 chromosome, complete genomeprophage LambdaSa2, site-specific recombinase phage integrase family protein9e-0960.1
NC_014011:1139818:115296411529641153572609Aminobacterium colombiense DSM 12261 chromosome, complete genomeintegrase family protein1e-0860.1
NC_010674:950276:951654951654952292639Clostridium botulinum B str. Eklund 17B, complete genomesite-specific recombinase1e-0860.1
NC_014721:2135500:215045321504532151325873Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeintegrase family protein2e-0859.3
NC_008577:2115440:212711521271152127729615Shewanella sp. ANA-3 chromosome 1, complete sequencephage integrase family protein2e-0859.3
NC_014220:1858747:186560718656071866449843Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeintegrase family protein2e-0859.3
NC_009012:2706755:272158027215802722146567Clostridium thermocellum ATCC 27405, complete genomephage integrase2e-0859.3
NC_015875:34270:484594845949001543Streptococcus pseudopneumoniae IS7493 chromosome, complete genomeprophage LambdaSa2, site-specific recombinase phage integrase family protein2e-0859.3
NC_013508:1491945:150146015014601501594135Edwardsiella tarda EIB202, complete genomehypothetical protein2e-0858.9
NC_014376:3009403:3032351303235130335741224Clostridium saccharolyticum WM1 chromosome, complete genomeintegrase family protein2e-0858.9
NC_006512:696000:703511703511704071561Idiomarina loihiensis L2TR, complete genomeIntegrase/recombinase, XerC/XerD family3e-0858.2
NC_008321:1993541:200790620079062008544639Shewanella sp. MR-4, complete genomephage integrase family protein3e-0858.2
NC_014623:3199248:321248432124843213164681Stigmatella aurantiaca DW4/3-1 chromosome, complete genomesite-specific recombinase, phage integrase family5e-0857.8
NC_008322:2077628:209227720922772092891615Shewanella sp. MR-7, complete genomephage integrase family protein7e-0857.4
NC_018678:2382708:239659923965992397159561Alteromonas macleodii str. 'English Channel 673' chromosome,integrase family protein9e-0857
NC_014961:50814:7074470744717481005Desulfurococcus mucosus DSM 2162 chromosome, complete genomeintegrase family protein8e-0857
NC_009092:1441813:145236114523611452921561Shewanella loihica PV-4, complete genomephage integrase family protein8e-0857
NC_013939:1812259:181857918185791819487909Deferribacter desulfuricans SSM1, complete genometyrosine recombinase8e-0857
NC_009901:1516340:152799315279931528553561Shewanella pealeana ATCC 700345, complete genomeintegrase family protein1e-0756.2
NC_015634:2595500:262310826231082623683576Bacillus coagulans 2-6 chromosome, complete genomeDNA integration/recombination/inversion protein3e-0755.5
NC_020302:2219378:2242156224215622433671212Corynebacterium halotolerans YIM 70093 = DSM 44683, completeintegrase/recombinase3e-0755.1
NC_020302:85821:1265931265931278041212Corynebacterium halotolerans YIM 70093 = DSM 44683, completeintegrase/recombinase3e-0755.1
NC_013456:212150:227153227153227713561Vibrio sp. Ex25 chromosome 1, complete genomesite-specific recombinase phage integrase family5e-0754.7
NC_009699:3429817:345181334518133452358546Clostridium botulinum F str. Langeland chromosome, complete genomephage integrase family site specific recombinase5e-0754.3
NC_017297:3428429:345042734504273450972546Clostridium botulinum F str. 230613 chromosome, complete genomesite-specific recombinase, phage integrase family5e-0754.3
NC_008345:4107847:411451241145124114679168Shewanella frigidimarina NCIMB 400, complete genomehypothetical protein5e-0754.3
NC_010382:3643288:366613336661333666714582Lysinibacillus sphaericus C3-41, complete genomephage integrase family site specific recombinase1e-0653.5
NC_006512:1722138:174273917427391743299561Idiomarina loihiensis L2TR, complete genomeIntegrase/recombinase, XerC/XerD family1e-0653.5
NC_009033:1108236:1130981113098111319821002Staphylothermus marinus F1, complete genomephage integrase family protein2e-0652.8
NC_009697:3110772:312844431284443128989546Clostridium botulinum A str. ATCC 19397 chromosome, completephage integrase family site specific recombinase2e-0652.4
NC_020181:4800298:480979548097954810412618Enterobacter aerogenes EA1509E, complete genomephage integrase family protein2e-0652.4
NC_010516:2676746:269860026986002699145546Clostridium botulinum B1 str. Okra, complete genomesite-specific recombinase, phage integrase family2e-0652.4
NC_015520:2612767:261303226130322613904873Mahella australiensis 50-1 BON chromosome, complete genomeintegrase family protein3e-0652
NC_009253:829913:844973844973845854882Desulfotomaculum reducens MI-1 chromosome, complete genomephage integrase family protein3e-0652
NC_015711:8964410:897108589710858971699615Myxococcus fulvus HW-1 chromosome, complete genomephage integrase family site specific recombinase3e-0651.6
NC_012658:1405788:141169614116961412241546Clostridium botulinum Ba4 str. 657 chromosome, complete genomephage integrase family site-specific recombinase3e-0651.6
NC_014205:1257652:1257652125765212586531002Staphylothermus hellenicus DSM 12710 chromosome, complete genomeintegrase family protein4e-0651.2
NC_008782:1566172:157190215719021572054153Acidovorax sp. JS42, complete genome4e-0651.2
NC_015573:2463123:247248224724822473336855Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeintegrase family protein5e-0651.2
NC_016791:1341858:134375713437571344395639Clostridium sp. BNL1100 chromosome, complete genomesite-specific recombinase XerD8e-0650.4